
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  ------------ 10/2009               #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

!!!   License for LGA program has expired  !!!
#   For updated version of the LGA program   #
# please contact Adam Zemla:  adamz@llnl.gov #

# Molecule1: number of CA atoms  160 ( 1315),  selected  160 , name one
# Molecule2: number of CA atoms  160 ( 1315),  selected  160 , name two
# PARAMETERS: input.pdb  -ie  -3  -d:4  -sda  -swap  -ch1:A  -ch2:A  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:   160       1_A - 160_A       2.57     2.57
  LCS_AVERAGE:    100.00

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:   155       1_A - 155_A       1.91     2.69
  LCS_AVERAGE:     94.14

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    61      60_A - 120_A       0.97     2.82
  LONGEST_CONTINUOUS_SEGMENT:    61      61_A - 121_A       0.99     2.80
  LCS_AVERAGE:     25.93

LCS_GDT    MOLECULE-1    MOLECULE-2     LCS_DETAILS     GDT_DETAILS                                                    TOTAL NUMBER OF RESIDUE PAIRS:  160
LCS_GDT     RESIDUE       RESIDUE       SEGMENT_SIZE    GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair
LCS_GDT   NAME NUMBER   NAME NUMBER    1.0  2.0  5.0    0.5  1.0  1.5  2.0  2.5  3.0  3.5  4.0  4.5  5.0  5.5  6.0  6.5  7.0  7.5  8.0  8.5  9.0  9.5 10.0
LCS_GDT     M     1_A     M     1_A     29  155  160      4   34   95  131  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     K     2_A     K     2_A     29  155  160      7   70  115  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     N     3_A     N     3_A     29  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     F     4_A     F     4_A     29  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     E     5_A     E     5_A     29  155  160     25   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     I     6_A     I     6_A     29  155  160     20   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     V     7_A     V     7_A     29  155  160     10   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     T     8_A     T     8_A     29  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     V     9_A     V     9_A     29  155  160     22   77  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     T    10_A     T    10_A     29  155  160     21   67  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     P    11_A     P    11_A     29  155  160     10   67  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     D    12_A     D    12_A     29  155  160     13   67  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     H    13_A     H    13_A     29  155  160     27   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     A    14_A     A    14_A     29  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     E    15_A     E    15_A     29  155  160     27   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     Q    16_A     Q    16_A     29  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     L    17_A     L    17_A     29  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     I    18_A     I    18_A     29  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     S    19_A     S    19_A     29  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     M    20_A     M    20_A     29  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     I    21_A     I    21_A     29  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     H    22_A     H    22_A     29  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     E    23_A     E    23_A     29  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     L    24_A     L    24_A     29  155  160     25   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     A    25_A     A    25_A     29  155  160     25   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     E    26_A     E    26_A     29  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     F    27_A     F    27_A     29  155  160     28   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     E    28_A     E    28_A     29  155  160     22   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     K    29_A     K    29_A     29  155  160      5   60  108  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     M    30_A     M    30_A     29  155  160      3   11   51  109  141  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     K    31_A     K    31_A     24  155  160      3   21   64  109  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     S    32_A     S    32_A      4  155  160      3   20   64  101  140  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     S    33_A     S    33_A     14  155  160      3    4   35   90  135  146  149  150  152  153  156  158  158  158  160  160  160  160  160  160 
LCS_GDT     V    34_A     V    34_A     14  155  160     21   78  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     V    35_A     V    35_A     14  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     N    36_A     N    36_A     14  155  160     11   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     T    37_A     T    37_A     14  155  160      9   77  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     A    38_A     A    38_A     14  155  160      8   70  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     E    39_A     E    39_A     14  155  160      9   73  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     K    40_A     K    40_A     14  155  160     26   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     L    41_A     L    41_A     14  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     R    42_A     R    42_A     14  155  160     23   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     K    43_A     K    43_A     14  155  160     20   73  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     D    44_A     D    44_A     14  155  160      5   70  114  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     I    45_A     I    45_A     14  155  160      5   31   92  131  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     E    46_A     E    46_A     14  155  160      5   21   83  131  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     N    47_A     N    47_A     22  155  160     13   78  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     K    48_A     K    48_A     24  155  160      4   66  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     A    49_A     A    49_A     39  155  160      3   32   78  126  142  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     V    50_A     V    50_A     39  155  160     15   56  117  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     H    51_A     H    51_A     39  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     G    52_A     G    52_A     39  155  160     12   71  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     F    53_A     F    53_A     56  155  160     23   78  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     I    54_A     I    54_A     56  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     A    55_A     A    55_A     56  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     F    56_A     F    56_A     56  155  160     23   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     I    57_A     I    57_A     56  155  160     25   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     G    58_A     G    58_A     56  155  160     11   66  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     E    59_A     E    59_A     56  155  160      5   28   99  133  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     E    60_A     E    60_A     61  155  160     12   61  114  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     P    61_A     P    61_A     61  155  160     24   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     A    62_A     A    62_A     61  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     G    63_A     G    63_A     61  155  160     22   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     M    64_A     M    64_A     61  155  160     26   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     N    65_A     N    65_A     61  155  160     12   73  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     L    66_A     L    66_A     61  155  160     23   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     F    67_A     F    67_A     61  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     Y    68_A     Y    68_A     61  155  160     18   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     Y    69_A     Y    69_A     61  155  160     19   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     A    70_A     A    70_A     61  155  160     18   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     Y    71_A     Y    71_A     61  155  160     19   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     S    72_A     S    72_A     61  155  160     18   76  117  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     T    73_A     T    73_A     61  155  160     13   53  104  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     W    74_A     W    74_A     61  155  160      4   53  104  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     V    75_A     V    75_A     61  155  160      4   37   96  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     G    76_A     G    76_A     61  155  160     13   34   96  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     Q    77_A     Q    77_A     61  155  160     13   52  104  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     Y    78_A     Y    78_A     61  155  160     13   76  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     L    79_A     L    79_A     61  155  160     23   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     H    80_A     H    80_A     61  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     M    81_A     M    81_A     61  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     E    82_A     E    82_A     61  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     D    83_A     D    83_A     61  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     L    84_A     L    84_A     61  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     Y    85_A     Y    85_A     61  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     I    86_A     I    86_A     61  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     R    87_A     R    87_A     61  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     P    88_A     P    88_A     61  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     Q    89_A     Q    89_A     61  155  160     25   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     F    90_A     F    90_A     61  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     R    91_A     R    91_A     61  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     R    92_A     R    92_A     61  155  160     10   69  111  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     M    93_A     M    93_A     61  155  160     21   78  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     G    94_A     G    94_A     61  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     L    95_A     L    95_A     61  155  160     24   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     A    96_A     A    96_A     61  155  160     20   73  114  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     R    97_A     R    97_A     61  155  160     18   78  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     T    98_A     T    98_A     61  155  160     24   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     L    99_A     L    99_A     61  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     W   100_A     W   100_A     61  155  160      7   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     K   101_A     K   101_A     61  155  160      8   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     K   102_A     K   102_A     61  155  160     23   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     L   103_A     L   103_A     61  155  160     22   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     A   104_A     A   104_A     61  155  160     23   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     E   105_A     E   105_A     61  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     L   106_A     L   106_A     61  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     A   107_A     A   107_A     61  155  160     30   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     R   108_A     R   108_A     61  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     D   109_A     D   109_A     61  155  160     33   78  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     K   110_A     K   110_A     61  155  160     14   76  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     G   111_A     G   111_A     61  155  160     24   77  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     I   112_A     I   112_A     61  155  160     10   77  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     V   113_A     V   113_A     61  155  160      9   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     R   114_A     R   114_A     61  155  160     13   60  117  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     L   115_A     L   115_A     61  155  160     13   69  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     E   116_A     E   116_A     61  155  160     15   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     W   117_A     W   117_A     61  155  160     30   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     A   118_A     A   118_A     61  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     V   119_A     V   119_A     61  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     L   120_A     L   120_A     61  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     D   121_A     D   121_A     61  155  160     17   71  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     W   122_A     W   122_A     49  155  160     10   48  116  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     N   123_A     N   123_A     49  155  160     13   60  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     K   124_A     K   124_A     49  155  160     13   62  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     N   125_A     N   125_A     49  155  160     13   60  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     A   126_A     A   126_A     49  155  160     13   73  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     I   127_A     I   127_A     49  155  160     13   62  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     A   128_A     A   128_A     35  155  160      4   41  114  132  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     L   129_A     L   129_A     35  155  160     13   62  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     Y   130_A     Y   130_A     35  155  160     24   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     D   131_A     D   131_A     35  155  160     20   73  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     T   132_A     T   132_A     35  155  160      3   51  111  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     V   133_A     V   133_A     35  155  160      9   40  102  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     D   134_A     D   134_A     35  155  160      3   26   67  131  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     Y   135_A     Y   135_A     35  155  160     15   51  102  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     V   136_A     V   136_A     35  155  160     13   42  102  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     N   137_A     N   137_A     35  155  160      6   62  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     L   138_A     L   138_A     35  155  160     15   78  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     T   139_A     T   139_A     35  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     K   140_A     K   140_A     35  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     S   141_A     S   141_A     35  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     E   142_A     E   142_A     35  155  160      9   78  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     G   143_A     G   143_A     35  155  160      8   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     W   144_A     W   144_A     35  155  160     33   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     F   145_A     F   145_A     35  155  160      3   75  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     T   146_A     T   146_A     35  155  160     15   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     F   147_A     F   147_A     35  155  160     19   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     R   148_A     R   148_A     35  155  160     23   79  118  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     M   149_A     M   149_A     18  155  160      3   35  111  134  143  148  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     D   150_A     D   150_A     11  155  160      3    8   14   62  121  145  149  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     G   151_A     G   151_A     11  155  160      3    6    8   14   31   53   83  113  147  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     A   152_A     A   152_A     11  155  160      3    8   11   19   45   67   96  126  147  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     A   153_A     A   153_A     11  155  160      4    8   20   58   91  123  145  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     I   154_A     I   154_A     11  155  160      4    8   17   58   92  124  145  151  152  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     N   155_A     N   155_A     11  155  160      4    8   11   12   38   67   98  130  148  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     K   156_A     K   156_A     11   15  160      4    8   11   12   13   75   97  117  132  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     F   157_A     F   157_A     11   15  160      4    8   11   40   53   75  117  131  148  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     A   158_A     A   158_A     11   15  160      4    8   11   30   53   75   97  117  146  154  156  158  158  159  160  160  160  160  160  160 
LCS_GDT     D   159_A     D   159_A     11   15  160      4    8   11   12   13   14   14   23   29   43   49  154  158  159  160  160  160  160  160  160 
LCS_GDT     E   160_A     E   160_A     11   15  160      0    8   11   12   13   14   14   15   16   31   41   58   62  159  160  160  160  160  160  160 
LCS_AVERAGE  LCS_A:  73.36  (  25.93   94.14  100.00 )

GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_AT     33     79    118    134    143    148    149    151    152    154    156    158    158    159    160    160    160    160    160    160 
GDT PERCENT_AT  20.62  49.38  73.75  83.75  89.38  92.50  93.12  94.38  95.00  96.25  97.50  98.75  98.75  99.38 100.00 100.00 100.00 100.00 100.00 100.00
GDT RMS_LOCAL    0.37   0.67   0.94   1.11   1.23   1.34   1.36   1.55   1.58   2.06   2.00   2.20   2.20   2.56   2.57   2.57   2.57   2.57   2.57   2.57
GDT RMS_ALL_AT   3.06   3.03   3.04   2.95   2.92   2.88   2.89   2.78   2.79   2.61   2.66   2.60   2.60   2.57   2.57   2.57   2.57   2.57   2.57   2.57

# Checking swapping
#   possible swapping detected:  E     5_A      E     5_A
#   possible swapping detected:  E    23_A      E    23_A
#   possible swapping detected:  E    28_A      E    28_A
#   possible swapping detected:  D    44_A      D    44_A
#   possible swapping detected:  F    53_A      F    53_A
#   possible swapping detected:  F    56_A      F    56_A
#   possible swapping detected:  E    59_A      E    59_A
#   possible swapping detected:  F    67_A      F    67_A
#   possible swapping detected:  Y    69_A      Y    69_A
#   possible swapping detected:  Y    78_A      Y    78_A
#   possible swapping detected:  F    90_A      F    90_A
#   possible swapping detected:  Y   135_A      Y   135_A
#   possible swapping detected:  E   160_A      E   160_A

#      Molecule1      Molecule2  DISTANCE    Mis    MC     All    Dist_max   GDC_mc  GDC_all
LGA    M     1_A      M     1_A     2.719     0    0.381   1.197    11.018   63.690   36.190
LGA    K     2_A      K     2_A     1.457     0    0.080   1.423     8.423   79.524   47.407
LGA    N     3_A      N     3_A     0.797     0    0.181   0.397     3.358   88.214   78.750
LGA    F     4_A      F     4_A     1.095     0    0.037   1.213     5.572   83.690   65.455
LGA    E     5_A      E     5_A     1.071     0    0.039   0.848     3.099   83.690   70.847
LGA    I     6_A      I     6_A     1.113     0    0.058   0.604     1.626   83.690   81.488
LGA    V     7_A      V     7_A     0.988     0    0.028   1.032     3.070   90.595   78.707
LGA    T     8_A      T     8_A     0.312     0    0.030   1.134     3.023   95.238   83.742
LGA    V     9_A      V     9_A     1.350     0    0.108   0.194     2.215   79.405   76.667
LGA    T    10_A      T    10_A     1.666     0    0.069   1.022     3.094   75.000   70.816
LGA    P    11_A      P    11_A     1.925     0    0.032   0.103     1.964   72.857   72.857
LGA    D    12_A      D    12_A     1.914     0    0.039   0.414     3.168   77.143   68.155
LGA    H    13_A      H    13_A     0.827     0    0.027   0.938     2.673   90.595   85.571
LGA    A    14_A      A    14_A     0.903     0    0.083   0.078     1.243   90.476   88.667
LGA    E    15_A      E    15_A     0.689     0    0.091   0.908     4.154   90.476   72.804
LGA    Q    16_A      Q    16_A     0.224     0    0.037   1.532     6.707  100.000   69.788
LGA    L    17_A      L    17_A     0.199     0    0.042   0.292     1.563  100.000   91.964
LGA    I    18_A      I    18_A     0.348     0    0.047   0.190     0.988  100.000   96.429
LGA    S    19_A      S    19_A     0.367     0    0.072   0.549     2.256   97.619   92.540
LGA    M    20_A      M    20_A     0.626     0    0.032   1.033     4.311   92.857   74.167
LGA    I    21_A      I    21_A     0.666     0    0.066   0.155     0.741   90.476   90.476
LGA    H    22_A      H    22_A     0.693     0    0.043   0.198     1.768   90.476   84.238
LGA    E    23_A      E    23_A     0.676     0    0.042   0.784     2.626   90.476   80.106
LGA    L    24_A      L    24_A     1.000     0    0.037   0.105     1.029   88.214   89.345
LGA    A    25_A      A    25_A     0.981     0    0.032   0.043     1.004   88.214   88.667
LGA    E    26_A      E    26_A     0.688     0    0.063   0.979     4.359   90.476   75.608
LGA    F    27_A      F    27_A     0.770     0    0.037   0.210     1.256   90.476   89.740
LGA    E    28_A      E    28_A     0.557     0    0.624   0.626     4.136   86.905   73.439
LGA    K    29_A      K    29_A     1.640     0    0.408   1.218     3.507   77.143   68.148
LGA    M    30_A      M    30_A     2.975     0    0.415   1.192     4.299   50.357   54.702
LGA    K    31_A      K    31_A     2.845     0    0.376   0.626     3.816   57.143   54.127
LGA    S    32_A      S    32_A     2.960     0    0.647   0.704     4.557   57.619   50.873
LGA    S    33_A      S    33_A     3.649     0    0.669   0.974     6.576   61.667   46.190
LGA    V    34_A      V    34_A     1.697     0    0.061   0.093     2.460   68.810   71.769
LGA    V    35_A      V    35_A     0.506     0    0.153   1.111     2.778   88.214   82.109
LGA    N    36_A      N    36_A     1.147     0    0.065   0.974     3.666   83.690   72.679
LGA    T    37_A      T    37_A     1.183     0    0.049   0.997     3.056   81.429   74.558
LGA    A    38_A      A    38_A     1.427     0    0.055   0.072     1.653   81.429   79.714
LGA    E    39_A      E    39_A     1.047     0    0.053   0.928     1.879   88.333   85.608
LGA    K    40_A      K    40_A     0.430     0    0.055   0.692     2.122   95.238   87.937
LGA    L    41_A      L    41_A     0.953     0    0.055   1.352     4.585   90.476   74.583
LGA    R    42_A      R    42_A     0.537     0    0.084   1.292     5.895   90.476   70.087
LGA    K    43_A      K    43_A     1.136     0    0.057   1.318     8.543   83.690   58.730
LGA    D    44_A      D    44_A     1.509     0    0.133   1.013     3.205   75.000   70.060
LGA    I    45_A      I    45_A     2.088     0    0.061   0.093     3.004   68.810   62.083
LGA    E    46_A      E    46_A     2.196     0    0.085   0.136     3.131   68.810   63.228
LGA    N    47_A      N    47_A     1.522     0    0.679   0.920     3.715   67.619   73.571
LGA    K    48_A      K    48_A     1.817     0    0.277   1.419     8.454   69.048   51.270
LGA    A    49_A      A    49_A     2.906     0    0.120   0.119     3.755   55.595   54.476
LGA    V    50_A      V    50_A     1.506     0    0.014   0.099     1.746   81.667   77.891
LGA    H    51_A      H    51_A     0.688     0    0.021   0.203     2.206   88.214   80.000
LGA    G    52_A      G    52_A     1.475     0    0.130   0.130     1.712   79.286   79.286
LGA    F    53_A      F    53_A     0.870     0    0.134   0.223     1.677   88.214   83.160
LGA    I    54_A      I    54_A     0.481     0    0.020   1.333     5.052   97.619   77.738
LGA    A    55_A      A    55_A     0.639     0    0.073   0.076     0.833   92.857   92.381
LGA    F    56_A      F    56_A     1.294     0    0.033   0.139     1.574   81.429   79.870
LGA    I    57_A      I    57_A     1.440     0    0.055   1.112     3.627   77.143   74.524
LGA    G    58_A      G    58_A     2.014     0    0.607   0.607     2.816   66.905   66.905
LGA    E    59_A      E    59_A     2.821     0    0.066   1.123     4.128   57.143   53.439
LGA    E    60_A      E    60_A     2.104     0    0.045   0.468     2.410   70.952   69.312
LGA    P    61_A      P    61_A     1.314     0    0.140   0.159     2.127   83.810   76.803
LGA    A    62_A      A    62_A     0.840     0    0.212   0.243     1.072   85.952   86.857
LGA    G    63_A      G    63_A     0.827     0    0.037   0.037     0.880   90.476   90.476
LGA    M    64_A      M    64_A     0.824     0    0.062   0.913     5.411   90.476   69.524
LGA    N    65_A      N    65_A     1.250     0    0.156   1.341     4.120   79.286   69.702
LGA    L    66_A      L    66_A     0.965     0    0.132   0.995     3.146   88.214   80.893
LGA    F    67_A      F    67_A     0.800     0    0.013   0.160     0.988   90.476   90.476
LGA    Y    68_A      Y    68_A     1.134     0    0.037   0.166     2.335   88.333   78.810
LGA    Y    69_A      Y    69_A     0.938     0    0.109   0.289     1.705   88.214   82.262
LGA    A    70_A      A    70_A     0.828     0    0.061   0.066     1.027   88.214   88.667
LGA    Y    71_A      Y    71_A     0.731     0    0.046   0.075     1.421   90.476   86.706
LGA    S    72_A      S    72_A     0.957     0    0.028   0.655     3.045   85.952   79.206
LGA    T    73_A      T    73_A     2.047     0    0.148   1.029     3.577   66.786   65.238
LGA    W    74_A      W    74_A     2.013     0    0.189   0.781     3.607   70.952   60.238
LGA    V    75_A      V    75_A     2.332     0    0.388   0.384     2.591   62.857   67.211
LGA    G    76_A      G    76_A     2.333     0    0.076   0.076     2.453   66.786   66.786
LGA    Q    77_A      Q    77_A     1.778     0    0.066   0.422     2.964   68.810   68.413
LGA    Y    78_A      Y    78_A     1.023     0    0.043   0.134     1.990   85.952   81.508
LGA    L    79_A      L    79_A     0.632     0    0.060   0.824     2.951   90.476   81.905
LGA    H    80_A      H    80_A     0.607     0    0.017   1.105     2.784   90.476   82.714
LGA    M    81_A      M    81_A     0.562     0    0.046   0.088     1.353   90.476   89.345
LGA    E    82_A      E    82_A     1.074     0    0.110   1.145     4.399   81.548   70.212
LGA    D    83_A      D    83_A     0.455     0    0.090   1.178     4.397   92.857   76.964
LGA    L    84_A      L    84_A     0.622     0    0.068   0.195     0.938   90.476   92.857
LGA    Y    85_A      Y    85_A     0.704     0    0.018   0.151     1.238   90.476   90.516
LGA    I    86_A      I    86_A     0.754     0    0.034   0.104     1.326   88.214   85.952
LGA    R    87_A      R    87_A     0.666     0    0.039   0.680     3.723   90.476   81.818
LGA    P    88_A      P    88_A     1.040     0    0.053   0.073     1.156   81.429   81.429
LGA    Q    89_A      Q    89_A     1.244     0    0.273   0.891     5.050   75.357   62.487
LGA    F    90_A      F    90_A     0.603     0    0.129   0.464     1.741   90.476   86.450
LGA    R    91_A      R    91_A     1.011     0    0.665   1.425     3.995   79.881   74.286
LGA    R    92_A      R    92_A     1.652     0    0.336   1.583     7.212   75.000   51.818
LGA    M    93_A      M    93_A     1.377     0    0.203   0.872     5.574   77.262   60.476
LGA    G    94_A      G    94_A     0.483     0    0.223   0.223     1.247   90.595   90.595
LGA    L    95_A      L    95_A     0.790     0    0.052   0.838     2.161   88.333   87.381
LGA    A    96_A      A    96_A     1.547     0    0.172   0.211     1.853   77.143   76.286
LGA    R    97_A      R    97_A     1.122     0    0.056   0.812     2.113   81.429   79.134
LGA    T    98_A      T    98_A     0.875     0    0.060   1.190     2.856   90.476   83.197
LGA    L    99_A      L    99_A     0.604     0    0.033   0.108     0.917   90.476   90.476
LGA    W   100_A      W   100_A     1.046     0    0.031   1.572     4.993   83.690   58.537
LGA    K   101_A      K   101_A     0.999     0    0.050   0.907     3.339   90.476   78.307
LGA    K   102_A      K   102_A     0.592     0    0.095   0.698     3.768   90.476   75.238
LGA    L   103_A      L   103_A     0.593     0    0.096   1.471     3.902   90.476   74.524
LGA    A   104_A      A   104_A     0.586     0    0.042   0.042     1.066   90.476   88.667
LGA    E   105_A      E   105_A     0.873     0    0.040   1.080     4.060   90.476   74.339
LGA    L   106_A      L   106_A     0.640     0    0.048   1.085     3.656   90.476   80.179
LGA    A   107_A      A   107_A     0.281     0    0.039   0.038     0.520   97.619   98.095
LGA    R   108_A      R   108_A     0.548     0    0.037   1.401     6.792   90.476   62.035
LGA    D   109_A      D   109_A     1.267     0    0.068   1.231     5.936   81.548   61.845
LGA    K   110_A      K   110_A     1.322     0    0.065   0.693     2.321   79.286   75.820
LGA    G   111_A      G   111_A     1.482     0    0.059   0.059     1.712   79.286   79.286
LGA    I   112_A      I   112_A     1.029     0    0.039   0.615     1.501   88.214   83.750
LGA    V   113_A      V   113_A     0.898     0    0.278   1.344     4.346   81.786   75.578
LGA    R   114_A      R   114_A     1.443     0    0.043   1.439     3.577   85.952   69.870
LGA    L   115_A      L   115_A     1.284     0    0.169   0.899     2.576   81.548   77.381
LGA    E   116_A      E   116_A     0.921     0    0.032   0.654     3.195   88.214   77.407
LGA    W   117_A      W   117_A     0.623     0    0.039   0.457     2.380   90.476   86.803
LGA    A   118_A      A   118_A     0.682     0    0.058   0.097     0.809   90.476   90.476
LGA    V   119_A      V   119_A     0.335     0    0.046   1.215     3.609   97.619   84.150
LGA    L   120_A      L   120_A     0.628     0    0.072   1.099     3.300   92.857   85.595
LGA    D   121_A      D   121_A     1.589     0    0.062   1.018     4.044   75.000   63.810
LGA    W   122_A      W   122_A     1.972     0    0.094   0.281     2.125   70.833   73.537
LGA    N   123_A      N   123_A     1.537     0    0.064   0.189     1.762   72.857   76.071
LGA    K   124_A      K   124_A     1.642     0    0.096   0.983     5.343   72.857   63.757
LGA    N   125_A      N   125_A     1.649     0    0.043   1.382     3.372   72.857   72.202
LGA    A   126_A      A   126_A     1.143     0    0.037   0.041     1.342   81.429   83.238
LGA    I   127_A      I   127_A     1.693     0    0.041   1.465     2.985   72.976   68.988
LGA    A   128_A      A   128_A     2.162     0    0.067   0.082     2.418   70.833   69.619
LGA    L   129_A      L   129_A     1.621     0    0.058   0.233     2.233   77.143   75.060
LGA    Y   130_A      Y   130_A     0.940     0    0.088   0.462     1.168   88.214   88.968
LGA    D   131_A      D   131_A     1.693     0    0.163   0.149     2.368   72.857   70.833
LGA    T   132_A      T   132_A     2.080     0    0.291   0.324     2.616   68.810   65.986
LGA    V   133_A      V   133_A     2.079     0    0.671   1.119     2.890   66.905   63.810
LGA    D   134_A      D   134_A     2.504     0    0.389   0.434     3.945   60.952   56.429
LGA    Y   135_A      Y   135_A     2.047     0    0.040   1.247     9.778   62.857   42.460
LGA    V   136_A      V   136_A     2.247     0    0.021   0.071     3.336   73.214   65.306
LGA    N   137_A      N   137_A     1.455     0    0.107   0.876     2.024   79.286   80.655
LGA    L   138_A      L   138_A     0.884     0    0.045   0.853     2.795   90.476   81.964
LGA    T   139_A      T   139_A     1.007     0    0.083   1.122     3.528   85.952   78.571
LGA    K   140_A      K   140_A     0.986     0    0.068   0.828     4.309   83.810   71.958
LGA    S   141_A      S   141_A     1.252     0    0.074   0.612     1.525   79.286   80.000
LGA    E   142_A      E   142_A     1.591     0    0.183   0.511     3.831   81.548   70.794
LGA    G   143_A      G   143_A     1.285     0    0.151   0.151     1.506   79.286   79.286
LGA    W   144_A      W   144_A     1.248     0    0.101   0.198     1.679   83.690   82.143
LGA    F   145_A      F   145_A     1.290     0    0.023   1.180     7.205   81.429   52.078
LGA    T   146_A      T   146_A     1.316     0    0.044   1.071     3.661   83.690   73.673
LGA    F   147_A      F   147_A     1.061     0    0.078   0.476     2.790   85.952   77.879
LGA    R   148_A      R   148_A     1.152     0    0.068   1.443     6.522   88.214   58.788
LGA    M   149_A      M   149_A     1.682     0    0.040   1.061     4.141   69.048   62.560
LGA    D   150_A      D   150_A     4.048     0    0.118   0.177     5.535   33.690   44.583
LGA    G   151_A      G   151_A     7.171     0    0.517   0.517     7.171   13.690   13.690
LGA    A   152_A      A   152_A     8.156     0    0.088   0.108     9.041    7.262    6.095
LGA    A   153_A      A   153_A     6.161     0    0.049   0.065     6.799   15.238   17.429
LGA    I   154_A      I   154_A     6.192     0    0.038   0.965     7.601   12.857   17.798
LGA    N   155_A      N   155_A     8.980     0    0.035   0.964    13.225    2.976    1.548
LGA    K   156_A      K   156_A     9.842     0    0.057   1.138    10.395    0.595    4.550
LGA    F   157_A      F   157_A     8.227     0    0.078   0.268     9.638    3.214   11.342
LGA    A   158_A      A   158_A     9.331     0    0.118   0.117    12.270    1.071    1.143
LGA    D   159_A      D   159_A    13.608     0    0.697   0.609    15.480    0.000    0.000
LGA    E   160_A      E   160_A    14.926     0    0.571   1.125    16.330    0.000    0.000

# RMSD_GDC results:       CA      MC common percent     ALL common percent   GDC_mc  GDC_all
NUMBER_OF_ATOMS_AA:      160     640    640  100.00    1315   1315  100.00               160
SUMMARY(RMSD_GDC):     2.575          2.626                  3.032           77.141   70.551

#CA            N1   N2   DIST      N    RMSD    GDT_TS    LGA_S3     LGA_Q 
SUMMARY(GDT)  160  160    4.0    151    1.55    81.875    88.990     9.130

LGA_LOCAL      RMSD:   1.554  Number of atoms:  151  under DIST:   4.00
LGA_ASGN_ATOMS RMSD:   2.780  Number of assigned atoms:  160 
Std_ASGN_ATOMS RMSD:   2.575  Standard rmsd on all 160 assigned CA atoms 

Unitary ROTATION matrix and the SHIFT vector superimpose molecules  (1=>2)
  X_new =  -0.818505 * X  +  -0.549948 * Y  +  -0.166151 * Z  +  63.357410
  Y_new =  -0.551089 * X  +   0.833317 * Y  +  -0.043406 * Z  + -13.443499
  Z_new =   0.162328 * X  +   0.056036 * Y  +  -0.985144 * Z  +   5.911718 

Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ:
           Phi     Theta       Psi   [DEG:       Phi     Theta       Psi ]
XYZ: -2.549021 -0.163049  3.084773   [DEG: -146.0481   -9.3420  176.7445 ]
ZXZ: -1.315261  2.969010  1.238403   [DEG:  -75.3589  170.1117   70.9553 ]
 
# END of job
