
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  ------------ 10/2009               #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

!!!   License for LGA program has expired  !!!
#   For updated version of the LGA program   #
# please contact Adam Zemla:  adamz@llnl.gov #

# Molecule1: number of CA atoms  160 ( 1315),  selected  160 , name one
# Molecule2: number of CA atoms  160 ( 1315),  selected  160 , name two
# PARAMETERS: input.pdb  -ie  -3  -d:4  -sda  -swap  -ch1:A  -ch2:A  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:   160       1_A - 160_A       2.12     2.12
  LCS_AVERAGE:    100.00

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:   159       1_A - 159_A       1.98     2.13
  LCS_AVERAGE:     98.81

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    63      60_A - 122_A       1.00     2.28
  LONGEST_CONTINUOUS_SEGMENT:    63      61_A - 123_A       1.00     2.28
  LCS_AVERAGE:     28.05

LCS_GDT    MOLECULE-1    MOLECULE-2     LCS_DETAILS     GDT_DETAILS                                                    TOTAL NUMBER OF RESIDUE PAIRS:  160
LCS_GDT     RESIDUE       RESIDUE       SEGMENT_SIZE    GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair
LCS_GDT   NAME NUMBER   NAME NUMBER    1.0  2.0  5.0    0.5  1.0  1.5  2.0  2.5  3.0  3.5  4.0  4.5  5.0  5.5  6.0  6.5  7.0  7.5  8.0  8.5  9.0  9.5 10.0
LCS_GDT     M     1_A     M     1_A     32  159  160      4   48   94  133  145  148  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     K     2_A     K     2_A     32  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     N     3_A     N     3_A     32  159  160     19   79  120  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     F     4_A     F     4_A     32  159  160     33   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     E     5_A     E     5_A     32  159  160     22   79  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     I     6_A     I     6_A     32  159  160     14   78  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     V     7_A     V     7_A     32  159  160     19   81  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     T     8_A     T     8_A     32  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     V     9_A     V     9_A     32  159  160     24   76  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     T    10_A     T    10_A     32  159  160      8   63  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     P    11_A     P    11_A     32  159  160     19   63  119  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     D    12_A     D    12_A     32  159  160      8   54  116  136  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     H    13_A     H    13_A     32  159  160     24   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     A    14_A     A    14_A     32  159  160     36   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     E    15_A     E    15_A     32  159  160     24   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     Q    16_A     Q    16_A     32  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     L    17_A     L    17_A     32  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     I    18_A     I    18_A     32  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     S    19_A     S    19_A     32  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     M    20_A     M    20_A     32  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     I    21_A     I    21_A     32  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     H    22_A     H    22_A     32  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     E    23_A     E    23_A     32  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     L    24_A     L    24_A     32  159  160     26   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     A    25_A     A    25_A     32  159  160     26   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     E    26_A     E    26_A     32  159  160     25   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     F    27_A     F    27_A     32  159  160     28   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     E    28_A     E    28_A     32  159  160     24   79  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     K    29_A     K    29_A     32  159  160     22   76  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     M    30_A     M    30_A     32  159  160     22   71  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     K    31_A     K    31_A     32  159  160     18   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     S    32_A     S    32_A     32  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     S    33_A     S    33_A      3  159  160      8   23   29   61   86  121  133  150  151  153  158  158  159  159  160  160  160  160  160  160 
LCS_GDT     V    34_A     V    34_A     15  159  160     19   78  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     V    35_A     V    35_A     15  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     N    36_A     N    36_A     15  159  160     33   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     T    37_A     T    37_A     15  159  160      8   79  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     A    38_A     A    38_A     15  159  160      8   46  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     E    39_A     E    39_A     15  159  160      8   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     K    40_A     K    40_A     15  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     L    41_A     L    41_A     15  159  160     36   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     R    42_A     R    42_A     15  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     K    43_A     K    43_A     15  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     D    44_A     D    44_A     15  159  160     13   79  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     I    45_A     I    45_A     15  159  160      8   55  110  137  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     E    46_A     E    46_A     15  159  160      4    7  114  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     N    47_A     N    47_A     23  159  160     12   81  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     K    48_A     K    48_A     57  159  160      3   71  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     A    49_A     A    49_A     57  159  160      4   51   97  132  145  148  150  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     V    50_A     V    50_A     59  159  160      8   76  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     H    51_A     H    51_A     59  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     G    52_A     G    52_A     59  159  160     14   67  120  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     F    53_A     F    53_A     59  159  160     13   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     I    54_A     I    54_A     59  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     A    55_A     A    55_A     59  159  160     33   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     F    56_A     F    56_A     59  159  160     18   79  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     I    57_A     I    57_A     59  159  160     26   81  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     G    58_A     G    58_A     59  159  160     14   68  118  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     E    59_A     E    59_A     62  159  160     14   68  117  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     E    60_A     E    60_A     63  159  160     15   79  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     P    61_A     P    61_A     63  159  160     26   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     A    62_A     A    62_A     63  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     G    63_A     G    63_A     63  159  160     31   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     M    64_A     M    64_A     63  159  160     31   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     N    65_A     N    65_A     63  159  160     14   73  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     L    66_A     L    66_A     63  159  160     30   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     F    67_A     F    67_A     63  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     Y    68_A     Y    68_A     63  159  160     27   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     Y    69_A     Y    69_A     63  159  160     33   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     A    70_A     A    70_A     63  159  160     31   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     Y    71_A     Y    71_A     63  159  160     13   76  120  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     S    72_A     S    72_A     63  159  160      8   72  120  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     T    73_A     T    73_A     63  159  160      8   31  112  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     W    74_A     W    74_A     63  159  160      8   53  112  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     V    75_A     V    75_A     63  159  160      4   31  112  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     G    76_A     G    76_A     63  159  160      4   32  112  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     Q    77_A     Q    77_A     63  159  160      4   48  112  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     Y    78_A     Y    78_A     63  159  160     20   82  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     L    79_A     L    79_A     63  159  160     34   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     H    80_A     H    80_A     63  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     M    81_A     M    81_A     63  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     E    82_A     E    82_A     63  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     D    83_A     D    83_A     63  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     L    84_A     L    84_A     63  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     Y    85_A     Y    85_A     63  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     I    86_A     I    86_A     63  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     R    87_A     R    87_A     63  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     P    88_A     P    88_A     63  159  160     30   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     Q    89_A     Q    89_A     63  159  160     14   81  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     F    90_A     F    90_A     63  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     R    91_A     R    91_A     63  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     R    92_A     R    92_A     63  159  160     40   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     M    93_A     M    93_A     63  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     G    94_A     G    94_A     63  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     L    95_A     L    95_A     63  159  160     40   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     A    96_A     A    96_A     63  159  160     22   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     R    97_A     R    97_A     63  159  160     33   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     T    98_A     T    98_A     63  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     L    99_A     L    99_A     63  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     W   100_A     W   100_A     63  159  160     33   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     K   101_A     K   101_A     63  159  160     33   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     K   102_A     K   102_A     63  159  160     37   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     L   103_A     L   103_A     63  159  160     37   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     A   104_A     A   104_A     63  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     E   105_A     E   105_A     63  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     L   106_A     L   106_A     63  159  160     40   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     A   107_A     A   107_A     63  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     R   108_A     R   108_A     63  159  160     40   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     D   109_A     D   109_A     63  159  160     30   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     K   110_A     K   110_A     63  159  160     13   78  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     G   111_A     G   111_A     63  159  160     19   79  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     I   112_A     I   112_A     63  159  160     23   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     V   113_A     V   113_A     63  159  160     35   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     R   114_A     R   114_A     63  159  160     15   65  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     L   115_A     L   115_A     63  159  160     15   80  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     E   116_A     E   116_A     63  159  160     18   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     W   117_A     W   117_A     63  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     A   118_A     A   118_A     63  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     V   119_A     V   119_A     63  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     L   120_A     L   120_A     63  159  160     38   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     D   121_A     D   121_A     63  159  160     30   81  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     W   122_A     W   122_A     63  159  160     14   77  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     N   123_A     N   123_A     63  159  160     17   81  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     K   124_A     K   124_A     57  159  160     14   76  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     N   125_A     N   125_A     57  159  160     12   66  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     A   126_A     A   126_A     57  159  160     12   82  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     I   127_A     I   127_A     57  159  160     10   76  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     A   128_A     A   128_A     57  159  160      4   32  111  134  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     L   129_A     L   129_A     57  159  160     12   65  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     Y   130_A     Y   130_A     57  159  160     28   83  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     D   131_A     D   131_A     57  159  160     22   79  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     T   132_A     T   132_A     57  159  160      3   46  107  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     V   133_A     V   133_A     57  159  160     15   49  107  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     D   134_A     D   134_A     56  159  160      6   31  103  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     Y   135_A     Y   135_A     32  159  160     15   61  111  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     V   136_A     V   136_A     32  159  160     12   51  107  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     N   137_A     N   137_A     32  159  160     15   79  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     L   138_A     L   138_A     32  159  160     23   80  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     T   139_A     T   139_A     32  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     K   140_A     K   140_A     32  159  160     15   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     S   141_A     S   141_A     32  159  160      8   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     E   142_A     E   142_A     32  159  160      8   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     G   143_A     G   143_A     32  159  160     29   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     W   144_A     W   144_A     32  159  160     41   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     F   145_A     F   145_A     32  159  160     33   84  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     T   146_A     T   146_A     19  159  160     26   82  121  140  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     F   147_A     F   147_A     19  159  160      8   16   84  124  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     R   148_A     R   148_A     19  159  160      8   40  100  130  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     M   149_A     M   149_A     19  159  160      5   31   97  130  146  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     D   150_A     D   150_A     19  159  160      6   14   26  100  142  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     G   151_A     G   151_A     15  159  160      6    9   17   30   65  116  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     A   152_A     A   152_A     12  159  160      6    9   17   33   94  130  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     A   153_A     A   153_A     12  159  160      6    9   23   80  130  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     I   154_A     I   154_A     12  159  160      6    9   42   84  132  149  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     N   155_A     N   155_A     12  159  160      6    9   13   40   94  132  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     K   156_A     K   156_A     12  159  160      6    9   11   22   46  105  140  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     F   157_A     F   157_A     12  159  160      5   16   32   68  100  138  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     A   158_A     A   158_A     12  159  160      6    9   23   62  106  142  151  156  157  157  158  159  159  159  160  160  160  160  160  160 
LCS_GDT     D   159_A     D   159_A     12  159  160      3    8   11   12   13   13   22   62   97  155  157  159  159  159  160  160  160  160  160  160 
LCS_GDT     E   160_A     E   160_A     12   15  160      3    5    9   12   13   17   19   22   32   45   75  159  159  159  160  160  160  160  160  160 
LCS_AVERAGE  LCS_A:  75.62  (  28.05   98.81  100.00 )

GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_AT     41     84    121    140    146    149    151    156    157    157    158    159    159    159    160    160    160    160    160    160 
GDT PERCENT_AT  25.62  52.50  75.62  87.50  91.25  93.12  94.38  97.50  98.12  98.12  98.75  99.38  99.38  99.38 100.00 100.00 100.00 100.00 100.00 100.00
GDT RMS_LOCAL    0.36   0.62   0.90   1.13   1.22   1.39   1.52   1.73   1.80   1.80   1.85   2.07   1.98   1.98   2.12   2.12   2.12   2.12   2.12   2.12
GDT RMS_ALL_AT   2.41   2.38   2.45   2.40   2.35   2.26   2.19   2.15   2.14   2.14   2.14   2.12   2.13   2.13   2.12   2.12   2.12   2.12   2.12   2.12

# Checking swapping
#   possible swapping detected:  E    15_A      E    15_A
#   possible swapping detected:  E    26_A      E    26_A
#   possible swapping detected:  E    39_A      E    39_A
#   possible swapping detected:  E    46_A      E    46_A
#   possible swapping detected:  F    53_A      F    53_A
#   possible swapping detected:  F    56_A      F    56_A
#   possible swapping detected:  Y    69_A      Y    69_A
#   possible swapping detected:  Y    78_A      Y    78_A
#   possible swapping detected:  E    82_A      E    82_A
#   possible swapping detected:  Y   135_A      Y   135_A
#   possible swapping detected:  F   147_A      F   147_A
#   possible swapping detected:  F   157_A      F   157_A

#      Molecule1      Molecule2  DISTANCE    Mis    MC     All    Dist_max   GDC_mc  GDC_all
LGA    M     1_A      M     1_A     3.420     0    0.286   1.036    11.652   57.381   34.167
LGA    K     2_A      K     2_A     0.372     0    0.103   0.822     3.684   88.452   72.275
LGA    N     3_A      N     3_A     1.897     0    0.115   1.108     3.543   75.000   69.345
LGA    F     4_A      F     4_A     0.850     0    0.169   0.260     1.817   88.214   85.671
LGA    E     5_A      E     5_A     1.469     0    0.049   0.215     2.344   81.429   73.968
LGA    I     6_A      I     6_A     1.412     0    0.071   0.610     1.625   81.429   80.357
LGA    V     7_A      V     7_A     1.183     0    0.057   1.184     3.893   85.952   75.102
LGA    T     8_A      T     8_A     0.549     0    0.036   1.130     3.484   90.595   82.177
LGA    V     9_A      V     9_A     1.633     0    0.117   0.218     2.557   72.976   71.905
LGA    T    10_A      T    10_A     2.123     0    0.064   1.015     3.248   68.810   64.966
LGA    P    11_A      P    11_A     2.352     0    0.046   0.119     2.404   66.786   65.918
LGA    D    12_A      D    12_A     2.285     0    0.030   0.823     2.830   68.810   72.143
LGA    H    13_A      H    13_A     1.232     0    0.023   1.004     3.596   83.810   73.714
LGA    A    14_A      A    14_A     1.113     0    0.092   0.088     1.439   85.952   85.048
LGA    E    15_A      E    15_A     0.632     0    0.133   1.214     4.291   90.476   74.127
LGA    Q    16_A      Q    16_A     0.242     0    0.039   1.324     5.146  100.000   78.201
LGA    L    17_A      L    17_A     0.398     0    0.050   0.210     1.581  100.000   89.702
LGA    I    18_A      I    18_A     0.582     0    0.065   1.279     4.645   97.619   81.369
LGA    S    19_A      S    19_A     0.370     0    0.071   0.563     2.226   97.619   92.540
LGA    M    20_A      M    20_A     0.777     0    0.055   0.935     3.273   90.476   82.083
LGA    I    21_A      I    21_A     0.935     0    0.062   0.126     1.131   85.952   84.821
LGA    H    22_A      H    22_A     0.978     0    0.032   1.350     4.963   88.214   68.762
LGA    E    23_A      E    23_A     0.866     0    0.069   0.332     1.102   88.214   89.524
LGA    L    24_A      L    24_A     1.195     0    0.037   0.120     1.413   81.429   81.429
LGA    A    25_A      A    25_A     1.468     0    0.026   0.034     1.663   79.286   79.714
LGA    E    26_A      E    26_A     1.163     0    0.035   1.014     4.503   79.286   65.661
LGA    F    27_A      F    27_A     1.271     0    0.042   0.321     1.555   79.286   85.584
LGA    E    28_A      E    28_A     1.817     0    0.137   0.843     2.473   75.000   75.873
LGA    K    29_A      K    29_A     1.994     0    0.058   0.826     3.163   68.810   65.873
LGA    M    30_A      M    30_A     2.098     0    0.049   1.034     3.795   68.810   62.202
LGA    K    31_A      K    31_A     1.447     0    0.044   0.955     2.941   81.548   71.534
LGA    S    32_A      S    32_A     0.663     0    0.546   0.559     2.174   86.071   81.746
LGA    S    33_A      S    33_A     5.666     0    0.575   0.859     9.736   34.762   24.444
LGA    V    34_A      V    34_A     1.831     0    0.133   1.008     4.038   63.214   63.469
LGA    V    35_A      V    35_A     0.907     0    0.161   1.029     3.876   88.214   78.639
LGA    N    36_A      N    36_A     1.248     0    0.061   0.994     2.426   81.429   78.333
LGA    T    37_A      T    37_A     1.420     0    0.030   1.004     3.111   79.286   72.245
LGA    A    38_A      A    38_A     1.722     0    0.040   0.055     2.073   75.000   72.952
LGA    E    39_A      E    39_A     1.130     0    0.057   1.079     3.048   85.952   73.545
LGA    K    40_A      K    40_A     0.690     0    0.042   1.107     5.102   90.476   78.624
LGA    L    41_A      L    41_A     1.088     0    0.040   1.368     4.088   85.952   73.036
LGA    R    42_A      R    42_A     0.860     0    0.090   1.342     7.190   90.476   65.195
LGA    K    43_A      K    43_A     1.075     0    0.032   1.003     3.514   85.952   73.810
LGA    D    44_A      D    44_A     1.204     0    0.135   0.880     2.184   81.429   78.274
LGA    I    45_A      I    45_A     1.288     0    0.033   1.048     2.863   83.690   77.381
LGA    E    46_A      E    46_A     1.761     0    0.092   0.743     1.981   75.000   79.683
LGA    N    47_A      N    47_A     1.517     0    0.687   0.589     3.818   67.619   74.583
LGA    K    48_A      K    48_A     1.978     0    0.293   0.928     7.526   66.905   50.212
LGA    A    49_A      A    49_A     3.055     0    0.148   0.148     3.925   53.810   53.048
LGA    V    50_A      V    50_A     1.512     0    0.018   0.085     2.112   77.143   74.150
LGA    H    51_A      H    51_A     0.684     0    0.031   1.139     2.944   90.476   81.048
LGA    G    52_A      G    52_A     1.585     0    0.144   0.144     1.742   77.143   77.143
LGA    F    53_A      F    53_A     0.817     0    0.119   0.322     2.172   85.952   82.468
LGA    I    54_A      I    54_A     0.303     0    0.015   1.015     3.435   97.619   80.714
LGA    A    55_A      A    55_A     0.686     0    0.086   0.096     0.862   92.857   92.381
LGA    F    56_A      F    56_A     1.499     0    0.061   0.149     2.994   77.143   67.186
LGA    I    57_A      I    57_A     1.472     0    0.405   1.439     4.051   66.190   64.286
LGA    G    58_A      G    58_A     2.354     0    0.371   0.371     2.552   64.881   64.881
LGA    E    59_A      E    59_A     2.400     0    0.069   0.687     3.032   64.762   61.429
LGA    E    60_A      E    60_A     1.525     0    0.053   0.991     4.264   77.143   67.672
LGA    P    61_A      P    61_A     1.177     0    0.103   0.369     3.127   85.952   75.918
LGA    A    62_A      A    62_A     0.505     0    0.213   0.243     0.821   92.857   92.381
LGA    G    63_A      G    63_A     0.715     0    0.035   0.035     0.715   90.476   90.476
LGA    M    64_A      M    64_A     0.843     0    0.062   1.109     6.724   90.476   69.881
LGA    N    65_A      N    65_A     1.333     0    0.150   1.137     3.158   79.286   72.321
LGA    L    66_A      L    66_A     1.044     0    0.105   1.116     3.514   83.690   76.845
LGA    F    67_A      F    67_A     0.945     0    0.022   0.126     1.105   85.952   86.364
LGA    Y    68_A      Y    68_A     1.274     0    0.033   0.096     1.782   85.952   78.651
LGA    Y    69_A      Y    69_A     1.029     0    0.095   0.370     1.462   83.690   83.690
LGA    A    70_A      A    70_A     1.107     0    0.088   0.097     1.213   81.429   83.238
LGA    Y    71_A      Y    71_A     1.412     0    0.092   0.139     3.415   79.286   67.143
LGA    S    72_A      S    72_A     1.449     0    0.033   0.078     1.564   77.143   78.571
LGA    T    73_A      T    73_A     1.848     0    0.145   0.175     2.176   70.833   68.231
LGA    W    74_A      W    74_A     1.794     0    0.193   0.428     2.096   75.000   75.952
LGA    V    75_A      V    75_A     2.055     0    0.360   0.335     2.443   64.762   70.748
LGA    G    76_A      G    76_A     2.092     0    0.064   0.064     2.142   68.810   68.810
LGA    Q    77_A      Q    77_A     2.107     0    0.046   0.186     3.634   66.786   57.566
LGA    Y    78_A      Y    78_A     0.710     0    0.055   1.172     3.445   85.952   80.040
LGA    L    79_A      L    79_A     0.611     0    0.075   1.359     2.958   90.476   79.940
LGA    H    80_A      H    80_A     0.685     0    0.019   0.920     2.214   90.476   84.333
LGA    M    81_A      M    81_A     0.520     0    0.033   0.903     2.236   90.476   84.107
LGA    E    82_A      E    82_A     1.018     0    0.111   0.558     2.709   83.690   76.085
LGA    D    83_A      D    83_A     0.675     0    0.085   1.216     4.789   90.476   75.060
LGA    L    84_A      L    84_A     0.687     0    0.100   0.229     1.079   88.214   90.536
LGA    Y    85_A      Y    85_A     0.690     0    0.013   0.133     0.725   90.476   93.651
LGA    I    86_A      I    86_A     0.438     0    0.034   0.143     0.694   95.238   94.048
LGA    R    87_A      R    87_A     0.422     0    0.039   0.867     4.333   97.619   81.385
LGA    P    88_A      P    88_A     0.969     0    0.060   0.163     1.581   85.952   82.789
LGA    Q    89_A      Q    89_A     1.399     0    0.266   0.395     2.822   73.214   75.873
LGA    F    90_A      F    90_A     0.455     0    0.110   0.509     1.847   97.619   87.489
LGA    R    91_A      R    91_A     0.602     0    0.084   1.144     2.721   88.214   81.818
LGA    R    92_A      R    92_A     0.849     0    0.181   1.078     4.700   86.071   78.009
LGA    M    93_A      M    93_A     0.412     0    0.210   1.303     4.501   90.833   79.940
LGA    G    94_A      G    94_A     0.414     0    0.160   0.160     0.832   97.619   97.619
LGA    L    95_A      L    95_A     0.417     0    0.040   0.870     2.672   95.238   87.560
LGA    A    96_A      A    96_A     1.182     0    0.181   0.215     1.692   85.952   83.333
LGA    R    97_A      R    97_A     0.580     0    0.042   0.871     1.801   90.476   86.407
LGA    T    98_A      T    98_A     0.409     0    0.062   1.125     2.418  100.000   88.571
LGA    L    99_A      L    99_A     0.540     0    0.031   0.107     0.943   92.857   91.667
LGA    W   100_A      W   100_A     0.739     0    0.044   1.217     4.073   90.476   74.830
LGA    K   101_A      K   101_A     0.703     0    0.039   0.901     2.630   90.476   80.000
LGA    K   102_A      K   102_A     0.525     0    0.100   0.874     3.934   90.476   75.026
LGA    L   103_A      L   103_A     0.442     0    0.073   1.442     3.859   95.238   79.881
LGA    A   104_A      A   104_A     0.368     0    0.050   0.051     0.736   95.238   94.286
LGA    E   105_A      E   105_A     0.645     0    0.032   0.688     3.504   90.476   74.180
LGA    L   106_A      L   106_A     0.638     0    0.049   1.021     2.711   90.476   84.107
LGA    A   107_A      A   107_A     0.659     0    0.040   0.039     0.981   90.476   90.476
LGA    R   108_A      R   108_A     0.725     0    0.045   1.015     5.009   90.476   73.377
LGA    D   109_A      D   109_A     0.991     0    0.030   1.223     5.221   88.214   72.798
LGA    K   110_A      K   110_A     1.060     0    0.082   0.765     1.686   83.690   83.492
LGA    G   111_A      G   111_A     1.330     0    0.069   0.069     1.330   81.429   81.429
LGA    I   112_A      I   112_A     0.776     0    0.045   0.134     1.239   90.476   88.214
LGA    V   113_A      V   113_A     0.573     0    0.272   1.356     3.737   81.786   76.190
LGA    R   114_A      R   114_A     1.394     0    0.073   0.579     2.321   85.952   79.221
LGA    L   115_A      L   115_A     1.121     0    0.152   0.215     1.440   88.333   84.881
LGA    E   116_A      E   116_A     0.898     0    0.034   0.740     2.979   88.214   76.243
LGA    W   117_A      W   117_A     0.567     0    0.024   0.218     1.449   90.476   87.891
LGA    A   118_A      A   118_A     0.931     0    0.053   0.095     1.058   88.214   88.667
LGA    V   119_A      V   119_A     0.781     0    0.042   1.193     3.345   88.214   79.728
LGA    L   120_A      L   120_A     1.352     0    0.056   0.108     1.840   81.429   77.143
LGA    D   121_A      D   121_A     2.007     0    0.051   1.271     4.094   66.786   63.333
LGA    W   122_A      W   122_A     2.363     0    0.070   0.128     2.424   64.762   65.918
LGA    N   123_A      N   123_A     1.699     0    0.068   0.231     1.879   72.857   77.202
LGA    K   124_A      K   124_A     2.027     0    0.075   0.653     2.848   66.786   64.021
LGA    N   125_A      N   125_A     1.872     0    0.045   0.400     3.309   72.857   70.060
LGA    A   126_A      A   126_A     1.205     0    0.041   0.041     1.452   81.429   83.238
LGA    I   127_A      I   127_A     2.109     0    0.053   0.096     2.561   64.881   64.821
LGA    A   128_A      A   128_A     2.754     0    0.069   0.086     3.013   59.048   57.238
LGA    L   129_A      L   129_A     1.967     0    0.086   0.259     2.690   72.976   70.952
LGA    Y   130_A      Y   130_A     1.254     0    0.100   0.415     1.493   83.690   85.198
LGA    D   131_A      D   131_A     2.139     0    0.190   0.299     2.854   66.786   63.869
LGA    T   132_A      T   132_A     2.437     0    0.267   1.043     3.837   62.857   60.680
LGA    V   133_A      V   133_A     2.083     0    0.660   1.486     3.853   66.905   65.306
LGA    D   134_A      D   134_A     2.287     0    0.415   0.934     2.728   66.905   66.905
LGA    Y   135_A      Y   135_A     1.641     0    0.022   1.437    11.796   64.881   37.063
LGA    V   136_A      V   136_A     1.821     0    0.031   0.063     2.483   77.143   72.993
LGA    N   137_A      N   137_A     1.126     0    0.066   0.330     1.417   85.952   83.690
LGA    L   138_A      L   138_A     0.951     0    0.079   0.202     1.914   90.476   86.012
LGA    T   139_A      T   139_A     1.299     0    0.089   0.990     2.140   81.429   76.599
LGA    K   140_A      K   140_A     1.310     0    0.084   1.220     4.182   79.286   72.751
LGA    S   141_A      S   141_A     1.248     0    0.066   0.594     1.388   81.429   81.429
LGA    E   142_A      E   142_A     1.508     0    0.188   0.556     3.154   81.548   74.233
LGA    G   143_A      G   143_A     1.403     0    0.143   0.143     1.572   79.286   79.286
LGA    W   144_A      W   144_A     1.441     0    0.080   0.252     1.878   79.286   77.143
LGA    F   145_A      F   145_A     0.816     0    0.048   1.235     6.316   85.952   60.433
LGA    T   146_A      T   146_A     0.663     0    0.044   1.039     2.098   88.214   84.218
LGA    F   147_A      F   147_A     2.326     0    0.166   0.647     3.972   66.786   53.074
LGA    R   148_A      R   148_A     2.009     0    0.061   1.264     7.438   64.762   51.255
LGA    M   149_A      M   149_A     1.902     0    0.020   0.695     3.261   66.905   63.095
LGA    D   150_A      D   150_A     3.098     0    0.035   0.180     3.842   48.452   47.560
LGA    G   151_A      G   151_A     5.190     0    0.062   0.062     5.231   27.500   27.500
LGA    A   152_A      A   152_A     5.647     0    0.033   0.053     6.058   25.000   23.429
LGA    A   153_A      A   153_A     4.277     0    0.037   0.057     4.491   37.143   38.381
LGA    I   154_A      I   154_A     3.932     0    0.041   1.331     5.658   37.381   33.333
LGA    N   155_A      N   155_A     5.777     0    0.033   1.337    10.289   21.548   13.631
LGA    K   156_A      K   156_A     6.430     0    0.064   1.070     6.596   18.333   18.254
LGA    F   157_A      F   157_A     4.899     0    0.063   1.205     5.425   28.810   33.680
LGA    A   158_A      A   158_A     5.096     0    0.098   0.096     7.159   20.238   20.476
LGA    D   159_A      D   159_A     9.243     0    0.676   0.601    11.550    2.976    1.488
LGA    E   160_A      E   160_A    10.623     0    0.059   1.078    13.853    0.119    0.265

# RMSD_GDC results:       CA      MC common percent     ALL common percent   GDC_mc  GDC_all
NUMBER_OF_ATOMS_AA:      160     640    640  100.00    1315   1315  100.00               160
SUMMARY(RMSD_GDC):     2.121          2.164                  2.593           77.589   72.047

#CA            N1   N2   DIST      N    RMSD    GDT_TS    LGA_S3     LGA_Q 
SUMMARY(GDT)  160  160    4.0    156    1.73    84.375    91.529     8.504

LGA_LOCAL      RMSD:   1.735  Number of atoms:  156  under DIST:   4.00
LGA_ASGN_ATOMS RMSD:   2.152  Number of assigned atoms:  160 
Std_ASGN_ATOMS RMSD:   2.121  Standard rmsd on all 160 assigned CA atoms 

Unitary ROTATION matrix and the SHIFT vector superimpose molecules  (1=>2)
  X_new =  -0.794078 * X  +  -0.586617 * Y  +  -0.159124 * Z  +  63.425503
  Y_new =  -0.587630 * X  +   0.807840 * Y  +  -0.045675 * Z  + -10.529881
  Z_new =   0.155340 * X  +   0.057236 * Y  +  -0.986202 * Z  +   5.952251 

Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ:
           Phi     Theta       Psi   [DEG:       Phi     Theta       Psi ]
XYZ: -2.504513 -0.155972  3.083620   [DEG: -143.4980   -8.9365  176.6784 ]
ZXZ: -1.291271  2.975278  1.217773   [DEG:  -73.9844  170.4709   69.7732 ]
 
# END of job
