
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  ------------ 10/2009               #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

!!!   License for LGA program has expired  !!!
#   For updated version of the LGA program   #
# please contact Adam Zemla:  adamz@llnl.gov #

# Molecule1: number of CA atoms  160 ( 1315),  selected  160 , name one
# Molecule2: number of CA atoms  160 ( 1315),  selected  160 , name two
# PARAMETERS: input.pdb  -ie  -3  -d:4  -sda  -swap  -ch1:A  -ch2:A  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:   160       1_A - 160_A       0.65     0.65
  LCS_AVERAGE:    100.00

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:   160       1_A - 160_A       0.65     0.65
  LCS_AVERAGE:    100.00

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:   160       1_A - 160_A       0.65     0.65
  LCS_AVERAGE:    100.00

LCS_GDT    MOLECULE-1    MOLECULE-2     LCS_DETAILS     GDT_DETAILS                                                    TOTAL NUMBER OF RESIDUE PAIRS:  160
LCS_GDT     RESIDUE       RESIDUE       SEGMENT_SIZE    GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair
LCS_GDT   NAME NUMBER   NAME NUMBER    1.0  2.0  5.0    0.5  1.0  1.5  2.0  2.5  3.0  3.5  4.0  4.5  5.0  5.5  6.0  6.5  7.0  7.5  8.0  8.5  9.0  9.5 10.0
LCS_GDT     M     1_A     M     1_A    160  160  160      0   84  147  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     K     2_A     K     2_A    160  160  160     76  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     N     3_A     N     3_A    160  160  160     71  148  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     F     4_A     F     4_A    160  160  160     84  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     E     5_A     E     5_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     I     6_A     I     6_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     V     7_A     V     7_A    160  160  160     53  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     T     8_A     T     8_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     V     9_A     V     9_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     T    10_A     T    10_A    160  160  160     84  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     P    11_A     P    11_A    160  160  160     84  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     D    12_A     D    12_A    160  160  160     76  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     H    13_A     H    13_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     A    14_A     A    14_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     E    15_A     E    15_A    160  160  160     53  146  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     Q    16_A     Q    16_A    160  160  160     83  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     L    17_A     L    17_A    160  160  160     81  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     I    18_A     I    18_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     S    19_A     S    19_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     M    20_A     M    20_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     I    21_A     I    21_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     H    22_A     H    22_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     E    23_A     E    23_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     L    24_A     L    24_A    160  160  160     68  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     A    25_A     A    25_A    160  160  160     84  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     E    26_A     E    26_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     F    27_A     F    27_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     E    28_A     E    28_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     K    29_A     K    29_A    160  160  160     75  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     M    30_A     M    30_A    160  160  160     83  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     K    31_A     K    31_A    160  160  160     19  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     S    32_A     S    32_A    160  160  160     23  119  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     S    33_A     S    33_A    160  160  160     23  145  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     V    34_A     V    34_A    160  160  160     58  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     V    35_A     V    35_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     N    36_A     N    36_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     T    37_A     T    37_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     A    38_A     A    38_A    160  160  160     74  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     E    39_A     E    39_A    160  160  160     29  146  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     K    40_A     K    40_A    160  160  160     33  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     L    41_A     L    41_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     R    42_A     R    42_A    160  160  160     83  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     K    43_A     K    43_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     D    44_A     D    44_A    160  160  160     84  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     I    45_A     I    45_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     E    46_A     E    46_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     N    47_A     N    47_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     K    48_A     K    48_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     A    49_A     A    49_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     V    50_A     V    50_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     H    51_A     H    51_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     G    52_A     G    52_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     F    53_A     F    53_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     I    54_A     I    54_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     A    55_A     A    55_A    160  160  160     80  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     F    56_A     F    56_A    160  160  160     64  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     I    57_A     I    57_A    160  160  160     77  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     G    58_A     G    58_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     E    59_A     E    59_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     E    60_A     E    60_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     P    61_A     P    61_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     A    62_A     A    62_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     G    63_A     G    63_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     M    64_A     M    64_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     N    65_A     N    65_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     L    66_A     L    66_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     F    67_A     F    67_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     Y    68_A     Y    68_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     Y    69_A     Y    69_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     A    70_A     A    70_A    160  160  160     75  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     Y    71_A     Y    71_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     S    72_A     S    72_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     T    73_A     T    73_A    160  160  160     84  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     W    74_A     W    74_A    160  160  160     84  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     V    75_A     V    75_A    160  160  160     53  145  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     G    76_A     G    76_A    160  160  160     53  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     Q    77_A     Q    77_A    160  160  160     35  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     Y    78_A     Y    78_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     L    79_A     L    79_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     H    80_A     H    80_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     M    81_A     M    81_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     E    82_A     E    82_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     D    83_A     D    83_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     L    84_A     L    84_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     Y    85_A     Y    85_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     I    86_A     I    86_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     R    87_A     R    87_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     P    88_A     P    88_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     Q    89_A     Q    89_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     F    90_A     F    90_A    160  160  160     84  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     R    91_A     R    91_A    160  160  160     84  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     R    92_A     R    92_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     M    93_A     M    93_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     G    94_A     G    94_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     L    95_A     L    95_A    160  160  160     84  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     A    96_A     A    96_A    160  160  160     29  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     R    97_A     R    97_A    160  160  160     34  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     T    98_A     T    98_A    160  160  160     84  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     L    99_A     L    99_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     W   100_A     W   100_A    160  160  160     64  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     K   101_A     K   101_A    160  160  160     25  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     K   102_A     K   102_A    160  160  160     36  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     L   103_A     L   103_A    160  160  160     64  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     A   104_A     A   104_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     E   105_A     E   105_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     L   106_A     L   106_A    160  160  160     84  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     A   107_A     A   107_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     R   108_A     R   108_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     D   109_A     D   109_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     K   110_A     K   110_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     G   111_A     G   111_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     I   112_A     I   112_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     V   113_A     V   113_A    160  160  160     53  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     R   114_A     R   114_A    160  160  160     22  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     L   115_A     L   115_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     E   116_A     E   116_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     W   117_A     W   117_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     A   118_A     A   118_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     V   119_A     V   119_A    160  160  160     78  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     L   120_A     L   120_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     D   121_A     D   121_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     W   122_A     W   122_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     N   123_A     N   123_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     K   124_A     K   124_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     N   125_A     N   125_A    160  160  160     81  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     A   126_A     A   126_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     I   127_A     I   127_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     A   128_A     A   128_A    160  160  160     58  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     L   129_A     L   129_A    160  160  160     78  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     Y   130_A     Y   130_A    160  160  160     79  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     D   131_A     D   131_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     T   132_A     T   132_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     V   133_A     V   133_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     D   134_A     D   134_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     Y   135_A     Y   135_A    160  160  160     79  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     V   136_A     V   136_A    160  160  160     82  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     N   137_A     N   137_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     L   138_A     L   138_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     T   139_A     T   139_A    160  160  160     80  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     K   140_A     K   140_A    160  160  160     58  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     S   141_A     S   141_A    160  160  160     47  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     E   142_A     E   142_A    160  160  160     12  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     G   143_A     G   143_A    160  160  160     36  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     W   144_A     W   144_A    160  160  160     58  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     F   145_A     F   145_A    160  160  160     85  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     T   146_A     T   146_A    160  160  160     16  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     F   147_A     F   147_A    160  160  160     25  141  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     R   148_A     R   148_A    160  160  160     35  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     M   149_A     M   149_A    160  160  160     58  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     D   150_A     D   150_A    160  160  160     35  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     G   151_A     G   151_A    160  160  160     35  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     A   152_A     A   152_A    160  160  160     36  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     A   153_A     A   153_A    160  160  160     64  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     I   154_A     I   154_A    160  160  160     64  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     N   155_A     N   155_A    160  160  160     58  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     K   156_A     K   156_A    160  160  160     58  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     F   157_A     F   157_A    160  160  160     58  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     A   158_A     A   158_A    160  160  160     58  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     D   159_A     D   159_A    160  160  160     36  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_GDT     E   160_A     E   160_A    160  160  160      3  149  159  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160  160 
LCS_AVERAGE  LCS_A: 100.00  ( 100.00  100.00  100.00 )

GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_AT     85    149    159    160    160    160    160    160    160    160    160    160    160    160    160    160    160    160    160    160 
GDT PERCENT_AT  53.12  93.12  99.38 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00 100.00
GDT RMS_LOCAL    0.37   0.58   0.63   0.65   0.65   0.65   0.65   0.65   0.65   0.65   0.65   0.65   0.65   0.65   0.65   0.65   0.65   0.65   0.65   0.65
GDT RMS_ALL_AT   0.72   0.65   0.65   0.65   0.65   0.65   0.65   0.65   0.65   0.65   0.65   0.65   0.65   0.65   0.65   0.65   0.65   0.65   0.65   0.65

# Checking swapping
#   possible swapping detected:  E    15_A      E    15_A
#   possible swapping detected:  E    23_A      E    23_A
#   possible swapping detected:  E    26_A      E    26_A
#   possible swapping detected:  F    27_A      F    27_A
#   possible swapping detected:  E    28_A      E    28_A
#   possible swapping detected:  E    46_A      E    46_A
#   possible swapping detected:  E    59_A      E    59_A
#   possible swapping detected:  E    60_A      E    60_A
#   possible swapping detected:  F    67_A      F    67_A
#   possible swapping detected:  Y    68_A      Y    68_A
#   possible swapping detected:  Y    69_A      Y    69_A
#   possible swapping detected:  Y    71_A      Y    71_A
#   possible swapping detected:  Y    78_A      Y    78_A
#   possible swapping detected:  E    82_A      E    82_A
#   possible swapping detected:  Y    85_A      Y    85_A
#   possible swapping detected:  E   105_A      E   105_A
#   possible swapping detected:  Y   135_A      Y   135_A
#   possible swapping detected:  E   142_A      E   142_A
#   possible swapping detected:  F   157_A      F   157_A
#   possible swapping detected:  E   160_A      E   160_A

#      Molecule1      Molecule2  DISTANCE    Mis    MC     All    Dist_max   GDC_mc  GDC_all
LGA    M     1_A      M     1_A     2.131     0    0.071   0.825     3.529   66.786   63.095
LGA    K     2_A      K     2_A     0.793     0    0.079   1.242     6.276   88.214   69.048
LGA    N     3_A      N     3_A     1.000     0    0.034   0.293     2.931   85.952   78.512
LGA    F     4_A      F     4_A     0.722     0    0.073   0.186     0.880   90.476   90.476
LGA    E     5_A      E     5_A     0.576     0    0.017   0.693     2.701   95.238   80.317
LGA    I     6_A      I     6_A     0.308     0    0.031   0.618     1.364   97.619   92.976
LGA    V     7_A      V     7_A     0.774     0    0.052   1.122     3.719   90.476   81.156
LGA    T     8_A      T     8_A     0.551     0    0.042   1.109     3.007   90.476   81.020
LGA    V     9_A      V     9_A     0.560     0    0.053   1.199     2.657   92.857   83.401
LGA    T    10_A      T    10_A     0.866     0    0.048   0.087     0.914   90.476   90.476
LGA    P    11_A      P    11_A     0.779     0    0.068   0.067     0.821   90.476   90.476
LGA    D    12_A      D    12_A     0.817     0    0.032   0.871     3.076   90.476   80.000
LGA    H    13_A      H    13_A     0.655     0    0.065   0.170     0.968   90.476   93.333
LGA    A    14_A      A    14_A     0.668     0    0.077   0.085     0.763   90.476   90.476
LGA    E    15_A      E    15_A     1.081     0    0.114   0.170     2.161   88.214   79.735
LGA    Q    16_A      Q    16_A     0.643     0    0.042   0.646     1.856   90.476   87.513
LGA    L    17_A      L    17_A     0.680     0    0.058   0.120     0.897   92.857   91.667
LGA    I    18_A      I    18_A     0.614     0    0.035   0.082     1.022   95.238   91.726
LGA    S    19_A      S    19_A     0.228     0    0.030   0.045     0.465  100.000  100.000
LGA    M    20_A      M    20_A     0.369     0    0.016   0.119     0.545   97.619   98.810
LGA    I    21_A      I    21_A     0.375     0    0.040   0.074     0.781  100.000   95.238
LGA    H    22_A      H    22_A     0.261     0    0.025   1.155     3.198  100.000   86.238
LGA    E    23_A      E    23_A     0.354     0    0.027   0.145     0.559  100.000   97.884
LGA    L    24_A      L    24_A     0.545     0    0.045   0.066     0.594   90.476   95.238
LGA    A    25_A      A    25_A     0.472     0    0.018   0.021     0.500  100.000  100.000
LGA    E    26_A      E    26_A     0.345     0    0.031   0.205     1.418   97.619   93.757
LGA    F    27_A      F    27_A     0.486     0    0.028   0.148     1.120   97.619   92.294
LGA    E    28_A      E    28_A     0.277     0    0.067   0.126     0.680   97.619   97.884
LGA    K    29_A      K    29_A     0.677     0    0.087   0.878     4.150   88.214   73.492
LGA    M    30_A      M    30_A     0.501     0    0.098   0.892     3.200   95.238   91.369
LGA    K    31_A      K    31_A     0.941     0    0.032   0.853     5.152   88.214   70.370
LGA    S    32_A      S    32_A     1.392     0    0.138   0.135     2.090   81.429   77.222
LGA    S    33_A      S    33_A     1.080     0    0.066   0.086     1.181   85.952   84.444
LGA    V    34_A      V    34_A     0.754     0    0.118   0.138     1.221   88.214   89.184
LGA    V    35_A      V    35_A     0.699     0    0.051   0.055     1.357   90.476   86.599
LGA    N    36_A      N    36_A     0.539     0    0.041   0.275     0.920   90.476   91.667
LGA    T    37_A      T    37_A     0.547     0    0.056   0.094     0.822   92.857   91.837
LGA    A    38_A      A    38_A     0.653     0    0.065   0.066     0.828   90.476   90.476
LGA    E    39_A      E    39_A     1.059     0    0.067   0.801     4.317   88.214   69.683
LGA    K    40_A      K    40_A     0.894     0    0.017   0.806     3.667   90.476   82.222
LGA    L    41_A      L    41_A     0.510     0    0.010   0.128     0.830   92.857   92.857
LGA    R    42_A      R    42_A     0.577     0    0.095   1.107     3.877   90.595   83.896
LGA    K    43_A      K    43_A     0.671     0    0.023   1.177     5.318   88.214   75.185
LGA    D    44_A      D    44_A     0.863     0    0.069   0.104     0.992   90.476   90.476
LGA    I    45_A      I    45_A     0.684     0    0.075   0.088     0.904   90.476   90.476
LGA    E    46_A      E    46_A     0.699     0    0.021   0.108     0.874   90.476   91.534
LGA    N    47_A      N    47_A     0.639     0    0.019   0.331     1.357   90.476   90.536
LGA    K    48_A      K    48_A     0.676     0    0.026   0.941     4.850   90.476   77.354
LGA    A    49_A      A    49_A     0.686     0    0.071   0.091     0.704   92.857   92.381
LGA    V    50_A      V    50_A     0.648     0    0.055   0.055     0.802   90.476   90.476
LGA    H    51_A      H    51_A     0.567     0    0.029   1.143     2.448   90.476   84.333
LGA    G    52_A      G    52_A     0.425     0    0.050   0.050     0.599   95.238   95.238
LGA    F    53_A      F    53_A     0.430     0    0.081   0.304     1.075   95.238   92.251
LGA    I    54_A      I    54_A     0.392     0    0.037   0.092     0.669  100.000   97.619
LGA    A    55_A      A    55_A     0.507     0    0.030   0.035     0.543   92.857   92.381
LGA    F    56_A      F    56_A     0.601     0    0.031   0.166     0.876   90.476   90.476
LGA    I    57_A      I    57_A     0.434     0    0.055   1.059     2.580  100.000   85.833
LGA    G    58_A      G    58_A     0.326     0    0.082   0.082     0.832   97.619   97.619
LGA    E    59_A      E    59_A     0.051     0    0.049   0.889     4.457  100.000   82.698
LGA    E    60_A      E    60_A     0.271     0    0.036   0.719     3.312  100.000   86.455
LGA    P    61_A      P    61_A     0.364     0    0.121   0.134     1.050   95.357   94.626
LGA    A    62_A      A    62_A     0.409     0    0.266   0.273     1.545   90.833   90.762
LGA    G    63_A      G    63_A     0.304     0    0.075   0.075     0.438  100.000  100.000
LGA    M    64_A      M    64_A     0.486     0    0.025   0.144     0.637   97.619   94.048
LGA    N    65_A      N    65_A     0.397     0    0.024   0.220     0.804  100.000   98.810
LGA    L    66_A      L    66_A     0.461     0    0.089   1.009     2.808   97.619   87.679
LGA    F    67_A      F    67_A     0.226     0    0.011   0.057     0.386  100.000  100.000
LGA    Y    68_A      Y    68_A     0.265     0    0.054   0.064     0.442  100.000  100.000
LGA    Y    69_A      Y    69_A     0.339     0    0.038   0.233     0.816  100.000   95.238
LGA    A    70_A      A    70_A     0.463     0    0.071   0.115     0.624  100.000   98.095
LGA    Y    71_A      Y    71_A     0.341     0    0.024   0.077     1.451  100.000   92.183
LGA    S    72_A      S    72_A     0.492     0    0.042   0.091     0.743   95.238   93.651
LGA    T    73_A      T    73_A     0.653     0    0.042   0.053     1.052   88.214   93.265
LGA    W    74_A      W    74_A     0.859     0    0.041   0.286     2.057   90.476   84.830
LGA    V    75_A      V    75_A     1.099     0    0.148   0.155     1.250   81.429   82.721
LGA    G    76_A      G    76_A     1.043     0    0.027   0.027     1.119   85.952   85.952
LGA    Q    77_A      Q    77_A     0.817     0    0.011   0.622     2.119   88.214   83.598
LGA    Y    78_A      Y    78_A     0.511     0    0.011   0.132     1.370   97.619   90.595
LGA    L    79_A      L    79_A     0.345     0    0.030   0.100     0.567  100.000   98.810
LGA    H    80_A      H    80_A     0.334     0    0.037   1.153     2.378  100.000   89.286
LGA    M    81_A      M    81_A     0.300     0    0.047   0.080     1.088  100.000   94.167
LGA    E    82_A      E    82_A     0.277     0    0.061   0.110     1.021   97.619   93.704
LGA    D    83_A      D    83_A     0.253     0    0.021   0.101     1.049   97.619   92.917
LGA    L    84_A      L    84_A     0.338     0    0.019   0.086     1.043  100.000   95.298
LGA    Y    85_A      Y    85_A     0.202     0    0.060   0.115     0.295  100.000  100.000
LGA    I    86_A      I    86_A     0.213     0    0.094   0.127     0.669   97.619   98.810
LGA    R    87_A      R    87_A     0.099     0    0.054   0.595     2.549   97.619   91.775
LGA    P    88_A      P    88_A     0.224     0    0.040   0.081     0.440  100.000  100.000
LGA    Q    89_A      Q    89_A     0.368     0    0.191   0.265     0.990   97.619   96.825
LGA    F    90_A      F    90_A     0.584     0    0.035   0.068     0.643   90.476   92.208
LGA    R    91_A      R    91_A     0.674     0    0.108   1.112     3.261   88.214   82.727
LGA    R    92_A      R    92_A     0.457     0    0.047   1.115     4.375   97.619   86.147
LGA    M    93_A      M    93_A     0.581     0    0.041   0.174     1.162   90.476   88.214
LGA    G    94_A      G    94_A     0.433     0    0.070   0.070     0.657   92.857   92.857
LGA    L    95_A      L    95_A     0.625     0    0.022   0.150     1.683   92.857   87.202
LGA    A    96_A      A    96_A     0.778     0    0.168   0.184     1.321   92.857   90.571
LGA    R    97_A      R    97_A     0.908     0    0.026   0.112     2.551   88.214   76.364
LGA    T    98_A      T    98_A     0.531     0    0.016   0.035     0.778   95.238   95.918
LGA    L    99_A      L    99_A     0.450     0    0.047   0.067     0.669   95.238   97.619
LGA    W   100_A      W   100_A     0.634     0    0.047   1.662     5.972   92.857   70.884
LGA    K   101_A      K   101_A     0.959     0    0.012   0.875     2.765   88.214   82.751
LGA    K   102_A      K   102_A     0.963     0    0.082   0.752     3.048   90.476   79.153
LGA    L   103_A      L   103_A     0.671     0    0.094   0.172     0.786   90.476   92.857
LGA    A   104_A      A   104_A     0.413     0    0.028   0.049     0.482  100.000  100.000
LGA    E   105_A      E   105_A     0.293     0    0.015   0.147     0.794  100.000   97.884
LGA    L   106_A      L   106_A     0.519     0    0.015   0.100     0.993   95.238   92.857
LGA    A   107_A      A   107_A     0.262     0    0.089   0.100     0.689   97.619   98.095
LGA    R   108_A      R   108_A     0.215     0    0.024   0.112     0.952  100.000   95.671
LGA    D   109_A      D   109_A     0.293     0    0.061   0.098     0.592  100.000   96.429
LGA    K   110_A      K   110_A     0.265     0    0.014   0.534     1.858  100.000   88.836
LGA    G   111_A      G   111_A     0.182     0    0.114   0.114     0.387  100.000  100.000
LGA    I   112_A      I   112_A     0.468     0    0.052   0.075     0.654   95.238   95.238
LGA    V   113_A      V   113_A     0.617     0    0.057   1.275     2.778   88.214   80.748
LGA    R   114_A      R   114_A     0.622     0    0.094   0.261     0.968   90.476   90.476
LGA    L   115_A      L   115_A     0.477     0    0.162   1.380     3.048   95.238   83.452
LGA    E   116_A      E   116_A     0.104     0    0.032   0.734     1.739  100.000   89.841
LGA    W   117_A      W   117_A     0.394     0    0.061   0.153     1.055  100.000   93.912
LGA    A   118_A      A   118_A     0.434     0    0.040   0.045     0.574   95.238   94.286
LGA    V   119_A      V   119_A     0.812     0    0.103   0.189     1.839   92.857   86.735
LGA    L   120_A      L   120_A     0.550     0    0.109   0.161     0.939   90.476   90.476
LGA    D   121_A      D   121_A     0.367     0    0.025   0.178     0.961  100.000   97.619
LGA    W   122_A      W   122_A     0.383     0    0.021   0.053     0.535  100.000   99.320
LGA    N   123_A      N   123_A     0.469     0    0.056   0.083     0.665   95.238   94.048
LGA    K   124_A      K   124_A     0.603     0    0.053   0.781     6.054   92.857   73.651
LGA    N   125_A      N   125_A     0.664     0    0.030   0.065     1.230   90.476   89.345
LGA    A   126_A      A   126_A     0.430     0    0.054   0.061     0.481  100.000  100.000
LGA    I   127_A      I   127_A     0.334     0    0.104   0.175     0.846   97.619   95.238
LGA    A   128_A      A   128_A     0.888     0    0.151   0.154     1.200   90.476   88.667
LGA    L   129_A      L   129_A     0.488     0    0.086   0.147     1.081   90.595   95.298
LGA    Y   130_A      Y   130_A     0.467     0    0.077   0.160     0.627  100.000   96.825
LGA    D   131_A      D   131_A     0.281     0    0.020   0.046     0.470  100.000  100.000
LGA    T   132_A      T   132_A     0.410     0    0.113   0.157     0.754   97.619   94.558
LGA    V   133_A      V   133_A     0.405     0    0.050   0.168     0.542  100.000   98.639
LGA    D   134_A      D   134_A     0.365     0    0.037   0.174     0.775  100.000   97.619
LGA    Y   135_A      Y   135_A     0.492     0    0.063   0.159     0.830   95.238   93.651
LGA    V   136_A      V   136_A     0.412     0    0.079   0.113     0.715   97.619   98.639
LGA    N   137_A      N   137_A     0.273     0    0.045   0.092     0.722  100.000   98.810
LGA    L   138_A      L   138_A     0.262     0    0.064   0.101     0.535  100.000   98.810
LGA    T   139_A      T   139_A     0.408     0    0.104   0.116     0.542   97.619   98.639
LGA    K   140_A      K   140_A     0.729     0    0.014   0.944     2.856   90.476   84.815
LGA    S   141_A      S   141_A     0.982     0    0.119   0.121     1.707   83.810   86.032
LGA    E   142_A      E   142_A     0.984     0    0.058   0.061     1.217   90.476   86.455
LGA    G   143_A      G   143_A     0.994     0    0.096   0.096     0.994   90.476   90.476
LGA    W   144_A      W   144_A     0.698     0    0.012   0.119     1.172   95.238   88.605
LGA    F   145_A      F   145_A     0.257     0    0.054   0.218     1.370   95.238   91.472
LGA    T   146_A      T   146_A     0.948     0    0.036   0.051     1.736   90.476   85.374
LGA    F   147_A      F   147_A     1.100     0    0.095   0.574     2.428   83.690   79.221
LGA    R   148_A      R   148_A     0.812     0    0.062   0.137     1.170   88.214   89.654
LGA    M   149_A      M   149_A     0.802     0    0.057   1.034     2.627   90.476   84.048
LGA    D   150_A      D   150_A     0.788     0    0.043   0.208     1.134   90.476   90.536
LGA    G   151_A      G   151_A     0.831     0    0.014   0.014     0.960   90.476   90.476
LGA    A   152_A      A   152_A     0.812     0    0.020   0.020     0.941   90.476   90.476
LGA    A   153_A      A   153_A     0.663     0    0.016   0.015     0.729   90.476   90.476
LGA    I   154_A      I   154_A     0.701     0    0.063   0.087     0.759   90.476   90.476
LGA    N   155_A      N   155_A     0.958     0    0.024   0.051     1.119   85.952   88.214
LGA    K   156_A      K   156_A     1.058     0    0.041   0.066     1.351   81.429   81.429
LGA    F   157_A      F   157_A     1.046     0    0.021   0.235     1.138   81.429   85.541
LGA    A   158_A      A   158_A     1.105     0    0.026   0.031     1.183   81.429   81.429
LGA    D   159_A      D   159_A     1.113     0    0.024   0.084     1.212   81.429   81.429
LGA    E   160_A      E   160_A     0.904     0    0.608   0.493     2.676   79.881   83.862

# RMSD_GDC results:       CA      MC common percent     ALL common percent   GDC_mc  GDC_all
NUMBER_OF_ATOMS_AA:      160     640    640  100.00    1315   1315  100.00               160
SUMMARY(RMSD_GDC):     0.652          0.679                  1.099           93.431   89.933

#CA            N1   N2   DIST      N    RMSD    GDT_TS    LGA_S3     LGA_Q 
SUMMARY(GDT)  160  160    4.0    160    0.65    98.281    99.411    21.287

LGA_LOCAL      RMSD:   0.652  Number of atoms:  160  under DIST:   4.00
LGA_ASGN_ATOMS RMSD:   0.652  Number of assigned atoms:  160 
Std_ASGN_ATOMS RMSD:   0.652  Standard rmsd on all 160 assigned CA atoms 

Unitary ROTATION matrix and the SHIFT vector superimpose molecules  (1=>2)
  X_new =   0.993567 * X  +  -0.051408 * Y  +   0.100907 * Z  +   0.081062
  Y_new =   0.109406 * X  +   0.205622 * Y  +  -0.972497 * Z  +   0.807434
  Z_new =   0.029246 * X  +   0.977280 * Y  +   0.209924 * Z  +  -0.846115 

Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ:
           Phi     Theta       Psi   [DEG:       Phi     Theta       Psi ]
XYZ:  0.109673 -0.029250  1.359207   [DEG:    6.2838   -1.6759   77.8768 ]
ZXZ:  0.103391  1.359299  0.029917   [DEG:    5.9239   77.8821    1.7141 ]
 
# END of job
