
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  ------------ 10/2009               #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

!!!   License for LGA program has expired  !!!
#   For updated version of the LGA program   #
# please contact Adam Zemla:  adamz@llnl.gov #

# Molecule1: number of CA atoms  158 ( 1264),  selected  141 , name one
# Molecule2: number of CA atoms  141 ( 1131),  selected  141 , name two
# PARAMETERS: input.pdb  -ie  -3  -d:4  -sda  -swap  -ch1:A  -ch2:A  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    55      14_A - 73_A        4.92    25.89
  LONGEST_CONTINUOUS_SEGMENT:    55      15_A - 74_A        4.92    25.79
  LONGEST_CONTINUOUS_SEGMENT:    55      16_A - 75_A        4.81    25.62
  LCS_AVERAGE:     32.28

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    22      46_A - 72_A        1.98    26.23
  LONGEST_CONTINUOUS_SEGMENT:    22      52_A - 73_A        1.19    24.18
  LONGEST_CONTINUOUS_SEGMENT:    22      53_A - 74_A        1.99    23.72
  LCS_AVERAGE:     12.76

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    20      53_A - 72_A        0.96    24.69
  LCS_AVERAGE:     10.51

LCS_GDT    MOLECULE-1    MOLECULE-2     LCS_DETAILS     GDT_DETAILS                                                    TOTAL NUMBER OF RESIDUE PAIRS:  141
LCS_GDT     RESIDUE       RESIDUE       SEGMENT_SIZE    GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair
LCS_GDT   NAME NUMBER   NAME NUMBER    1.0  2.0  5.0    0.5  1.0  1.5  2.0  2.5  3.0  3.5  4.0  4.5  5.0  5.5  6.0  6.5  7.0  7.5  8.0  8.5  9.0  9.5 10.0
LCS_GDT     A     9_A     A     9_A     15   17   38      5   12   16   16   18   20   23   27   32   35   38   43   47   51   51   56   58   60   63   65 
LCS_GDT     V    10_A     V    10_A     15   17   38      5   12   16   16   16   17   20   24   32   35   38   42   45   50   54   56   58   60   63   65 
LCS_GDT     E    11_A     E    11_A     15   17   38      5    9   16   16   16   17   19   24   30   35   38   42   45   50   51   56   58   60   63   65 
LCS_GDT     D    12_A     D    12_A     15   17   38      7   12   16   16   16   17   20   24   30   35   38   42   45   50   51   54   58   60   63   65 
LCS_GDT     F    13_A     F    13_A     15   17   38      5   11   16   16   16   17   19   20   25   27   38   42   49   52   54   55   57   60   63   65 
LCS_GDT     H    14_A     H    14_A     15   17   55      4   11   16   16   16   17   19   20   25   29   38   42   49   52   54   55   57   60   63   65 
LCS_GDT     K    15_A     K    15_A     15   17   55      6   12   16   16   16   17   19   24   29   33   38   42   45   50   51   53   57   60   63   65 
LCS_GDT     Y    16_A     Y    16_A     15   17   55      7   12   16   16   16   17   18   21   25   31   38   42   45   50   53   55   57   60   63   65 
LCS_GDT     H    17_A     H    17_A     15   17   55      7   12   16   16   16   17   18   27   36   41   45   47   49   52   54   55   57   59   60   63 
LCS_GDT     T    18_A     T    18_A     15   17   55      7   12   16   16   16   17   18   20   25   27   33   47   49   52   54   55   57   59   60   62 
LCS_GDT     A    19_A     A    19_A     15   17   55      7   12   16   16   16   17   18   20   26   32   35   41   49   52   54   55   57   59   60   62 
LCS_GDT     L    20_A     L    20_A     15   17   55      7   12   16   16   16   17   18   20   25   27   44   47   49   52   54   55   57   59   59   62 
LCS_GDT     V    21_A     V    21_A     15   17   55      7   12   16   16   16   17   18   20   36   41   45   47   49   52   54   55   56   59   59   61 
LCS_GDT     V    22_A     V    22_A     15   17   55      6   12   16   16   16   17   18   20   23   26   45   47   49   52   54   55   57   59   59   61 
LCS_GDT     R    23_A     R    23_A     15   17   55      4   11   16   16   16   17   18   20   30   39   45   47   49   52   54   55   56   56   59   61 
LCS_GDT     L    24_A     L    24_A      5   17   55      4    5    5    6    8   11   15   20   25   27   31   35   47   52   54   55   56   56   57   57 
LCS_GDT     A    25_A     A    25_A      5   17   55      4    5    5    6    8   16   18   20   25   27   31   43   49   52   54   55   56   56   57   57 
LCS_GDT     G    26_A     G    26_A      5    6   55     10   12   16   23   26   28   31   33   38   41   45   47   49   52   54   55   56   58   59   61 
LCS_GDT     V    27_A     V    27_A      5    6   55      4    5    6   23   26   28   31   33   38   41   45   47   49   52   54   55   56   56   57   59 
LCS_GDT     P    28_A     P    28_A      5   19   55      4    5    5    9   26   28   31   33   38   41   45   47   49   52   54   55   56   56   57   57 
LCS_GDT     P    29_A     P    29_A      5   19   55      4    5    5    6   14   28   31   33   38   41   45   47   49   52   54   55   56   56   57   57 
LCS_GDT     H    30_A     H    30_A     17   19   55      3    6   15   17   18   28   31   33   38   41   45   47   49   52   54   55   56   56   57   57 
LCS_GDT     E    31_A     E    31_A     17   19   55     12   16   16   17   20   25   28   33   38   41   45   47   49   52   54   55   56   56   57   57 
LCS_GDT     R    32_A     R    32_A     17   19   55     12   16   16   17   18   20   21   24   27   37   41   47   49   52   54   55   56   56   57   57 
LCS_GDT     Y    33_A     Y    33_A     17   19   55     12   16   16   17   18   20   21   31   38   41   45   47   49   52   54   55   56   56   57   57 
LCS_GDT     E    34_A     E    34_A     17   19   55     12   16   17   23   25   28   31   33   38   41   45   47   49   52   54   55   56   56   57   57 
LCS_GDT     R    35_A     R    35_A     17   19   55     12   16   16   17   18   20   27   30   36   41   45   47   49   52   54   55   56   56   57   57 
LCS_GDT     L    36_A     L    36_A     17   19   55     12   16   16   17   18   20   21   24   29   39   45   47   49   52   54   55   56   56   57   57 
LCS_GDT     D    37_A     D    37_A     17   19   55     12   16   16   23   26   28   31   33   38   41   45   47   49   52   54   55   56   56   57   57 
LCS_GDT     R    38_A     R    38_A     17   19   55     11   16   16   19   22   25   29   33   38   41   45   47   49   52   54   55   56   56   57   57 
LCS_GDT     W    39_A     W    39_A     17   19   55     12   16   16   17   18   20   21   30   36   41   45   47   49   52   54   55   56   56   57   57 
LCS_GDT     I    40_A     I    40_A     17   19   55     11   16   16   17   18   20   24   33   38   41   45   47   49   52   54   55   56   56   57   57 
LCS_GDT     T    41_A     T    41_A     17   19   55     12   16   18   23   25   28   31   33   38   41   45   47   49   52   54   55   56   56   57   57 
LCS_GDT     E    42_A     E    42_A     17   19   55     12   16   16   17   18   22   28   33   38   41   45   47   49   52   54   55   56   56   57   57 
LCS_GDT     Q    43_A     Q    43_A     17   19   55     12   16   16   17   18   20   24   33   38   41   45   47   49   52   54   55   56   56   57   57 
LCS_GDT     L    44_A     L    44_A     17   19   55     12   16   16   23   26   28   31   33   38   41   45   47   49   52   54   55   56   56   57   60 
LCS_GDT     I    45_A     I    45_A     17   19   55      9   16   16   17   22   25   30   33   38   41   45   47   49   52   54   55   56   56   57   60 
LCS_GDT     Y    46_A     Y    46_A     17   22   55      9   16   16   17   18   21   28   33   38   41   45   47   49   52   54   55   56   56   57   57 
LCS_GDT     R    52_A     R    52_A     19   22   55      4   12   16   21   26   28   31   31   34   39   44   47   49   52   54   56   58   60   63   65 
LCS_GDT     D    53_A     D    53_A     20   22   55     10   13   19   23   26   28   31   33   38   41   45   47   49   52   54   56   58   60   63   65 
LCS_GDT     E    54_A     E    54_A     20   22   55     10   14   19   23   26   28   31   33   38   41   45   47   49   52   54   56   58   60   63   65 
LCS_GDT     W    55_A     W    55_A     20   22   55     10   13   19   23   26   28   31   33   38   41   45   47   49   52   54   56   58   60   63   65 
LCS_GDT     I    56_A     I    56_A     20   22   55     10   14   19   23   26   28   31   33   38   41   45   47   49   52   54   56   58   60   63   65 
LCS_GDT     D    57_A     D    57_A     20   22   55     10   14   19   23   26   28   31   33   38   41   45   47   49   52   54   56   58   60   63   65 
LCS_GDT     A    58_A     A    58_A     20   22   55     10   15   19   23   26   28   31   33   38   41   45   47   49   52   54   56   58   60   63   65 
LCS_GDT     L    59_A     L    59_A     20   22   55     10   15   19   23   26   28   31   33   38   41   45   47   49   52   54   56   58   60   63   65 
LCS_GDT     A    60_A     A    60_A     20   22   55     10   15   19   23   26   28   31   33   38   41   45   47   49   52   54   56   58   60   63   65 
LCS_GDT     E    61_A     E    61_A     20   22   55     10   15   19   23   26   28   31   33   38   41   45   47   49   52   54   56   58   59   63   65 
LCS_GDT     A    62_A     A    62_A     20   22   55     11   15   19   23   26   28   31   33   38   41   45   47   49   52   54   56   58   60   63   65 
LCS_GDT     A    63_A     A    63_A     20   22   55     11   15   19   23   26   28   31   33   38   41   45   47   49   52   54   56   58   60   63   65 
LCS_GDT     G    64_A     G    64_A     20   22   55     11   15   19   23   26   28   31   33   38   41   45   47   49   52   54   56   58   59   63   65 
LCS_GDT     I    65_A     I    65_A     20   22   55     11   15   19   23   26   28   31   33   38   41   45   47   49   52   54   56   58   60   63   65 
LCS_GDT     F    66_A     F    66_A     20   22   55     11   15   19   23   26   28   31   33   38   41   45   47   49   52   54   56   58   60   63   65 
LCS_GDT     K    67_A     K    67_A     20   22   55     11   15   19   23   26   28   31   33   38   41   45   47   49   52   54   56   58   60   63   65 
LCS_GDT     E    68_A     E    68_A     20   22   55     11   15   19   23   26   28   31   33   38   41   45   47   49   52   54   56   58   59   62   65 
LCS_GDT     A    69_A     A    69_A     20   22   55     11   15   19   23   26   28   31   33   38   41   45   47   49   52   54   56   58   60   63   65 
LCS_GDT     L    70_A     L    70_A     20   22   55     11   15   19   23   26   28   31   33   38   41   45   47   49   52   54   56   58   60   63   65 
LCS_GDT     E    71_A     E    71_A     20   22   55     11   15   19   23   26   28   31   33   38   41   45   47   49   52   54   56   58   60   63   65 
LCS_GDT     R    72_A     R    72_A     20   22   55     11   15   19   23   26   28   31   33   38   41   45   47   49   52   54   56   58   60   63   65 
LCS_GDT     N    73_A     N    73_A     19   22   55      3    5   17   20   25   28   31   33   38   41   45   47   49   51   54   56   58   60   63   65 
LCS_GDT     I    74_A     I    74_A      4   22   55      3    4    7    9   12   16   22   29   36   40   43   45   47   51   51   56   58   60   63   65 
LCS_GDT     T    75_A     T    75_A     14   16   55      5   11   14   16   18   20   23   27   32   37   41   44   47   51   51   56   58   60   63   65 
LCS_GDT     T    76_A     T    76_A     14   16   52      8   14   15   16   18   20   23   27   32   37   41   44   47   51   51   56   58   60   63   65 
LCS_GDT     P    77_A     P    77_A     14   16   49      8   14   15   16   18   20   23   27   32   37   41   44   47   51   51   56   58   60   63   65 
LCS_GDT     E    78_A     E    78_A     14   16   49      8   14   15   16   18   20   23   27   32   37   41   44   47   51   51   56   58   60   63   65 
LCS_GDT     E    79_A     E    79_A     14   16   49      8   14   15   16   18   20   23   27   32   37   41   44   47   51   51   56   58   60   63   65 
LCS_GDT     F    80_A     F    80_A     14   16   49      8   14   15   16   18   20   23   27   32   37   41   44   47   51   51   56   58   60   63   65 
LCS_GDT     N    81_A     N    81_A     14   16   49      8   14   15   16   18   20   23   27   32   37   41   44   47   51   51   56   58   60   63   65 
LCS_GDT     A    82_A     A    82_A     14   16   49      8   14   15   16   18   20   23   27   32   37   41   44   47   51   51   56   58   60   63   65 
LCS_GDT     F    83_A     F    83_A     14   16   49      8   14   15   16   18   20   23   27   32   37   41   44   47   51   51   56   58   60   63   65 
LCS_GDT     L    84_A     L    84_A     14   16   49      8   14   15   16   18   20   23   27   32   37   41   44   47   51   51   56   58   60   63   65 
LCS_GDT     K    85_A     K    85_A     14   16   49      8   14   15   16   18   20   23   27   32   37   41   44   47   51   51   56   58   60   63   65 
LCS_GDT     E    86_A     E    86_A     14   16   49      8   14   15   16   16   20   23   27   32   37   41   44   47   51   51   56   58   60   63   65 
LCS_GDT     K    87_A     K    87_A     14   16   49      8   14   15   16   16   20   23   27   32   37   41   44   47   51   51   56   58   60   63   65 
LCS_GDT     G    88_A     G    88_A     14   16   49      8   14   15   16   16   17   18   24   29   36   41   44   47   51   51   56   58   60   63   65 
LCS_GDT     K    89_A     K    89_A      3   16   49      3    3    4    5   12   19   23   26   32   37   41   44   47   51   51   56   58   60   63   65 
LCS_GDT     R    90_A     R    90_A      5   18   49      3    4    7    9   16   18   22   26   32   35   41   44   47   51   51   56   58   60   63   65 
LCS_GDT     A    91_A     A    91_A     16   18   49      3    6   12   15   17   18   20   21   22   27   34   42   45   50   51   53   57   59   63   65 
LCS_GDT     V    92_A     V    92_A     16   18   49      7   14   17   17   17   18   20   23   23   26   28   32   38   44   49   53   57   59   63   65 
LCS_GDT     D    93_A     D    93_A     16   18   49      7   14   17   17   17   18   21   23   25   32   36   42   45   50   51   56   58   60   63   65 
LCS_GDT     L    94_A     L    94_A     16   18   49     11   14   17   17   17   18   21   26   32   37   41   44   47   51   51   56   58   60   63   65 
LCS_GDT     V    95_A     V    95_A     16   18   49      8   14   17   17   18   20   21   23   32   37   41   44   47   51   51   56   58   60   63   65 
LCS_GDT     A    96_A     A    96_A     16   18   49     11   14   17   17   18   20   23   27   32   37   41   44   47   51   51   56   58   60   63   65 
LCS_GDT     T    97_A     T    97_A     16   18   49     11   14   17   17   18   20   23   27   32   37   41   44   47   51   51   56   58   60   63   65 
LCS_GDT     L    98_A     L    98_A     16   18   49     11   14   17   17   17   19   23   27   32   37   41   44   47   51   51   56   58   60   63   65 
LCS_GDT     T    99_A     T    99_A     16   18   49     11   14   17   17   17   18   23   27   32   37   41   44   47   51   51   56   58   60   63   65 
LCS_GDT     N   100_A     N   100_A     16   18   49     11   14   17   17   18   20   23   27   32   35   38   42   47   51   51   56   58   60   63   65 
LCS_GDT     A   101_A     A   101_A     16   18   49     11   14   17   17   17   18   20   23   30   35   38   42   45   50   51   56   58   60   63   65 
LCS_GDT     Y   102_A     Y   102_A     16   18   46     11   14   17   17   17   18   20   23   24   28   38   42   45   50   51   53   57   60   63   65 
LCS_GDT     I   103_A     I   103_A     16   18   32     11   14   17   17   17   18   20   23   24   33   38   42   45   50   51   53   57   59   63   65 
LCS_GDT     A   104_A     A   104_A     16   18   32     11   14   17   17   17   18   20   23   24   27   38   42   45   50   51   53   57   59   60   63 
LCS_GDT     V   105_A     V   105_A     16   18   31     11   14   17   17   17   18   20   23   24   27   33   34   44   50   51   53   57   59   60   62 
LCS_GDT     L   106_A     L   106_A     16   18   27      8   13   17   17   17   18   20   23   24   27   33   34   36   45   51   53   57   59   60   62 
LCS_GDT     E   107_A     E   107_A     16   18   27      8   13   17   17   17   18   20   23   24   27   33   34   44   50   51   53   57   59   60   62 
LCS_GDT     G   108_A     G   108_A      4   18   27      3    5    8   10   14   15   19   23   23   24   27   31   33   38   44   46   50   54   59   61 
LCS_GDT     D   109_A     D   109_A     10   14   27      9   12   16   16   16   16   16   19   21   23   28   31   34   37   44   46   49   52   59   61 
LCS_GDT     P   110_A     P   110_A     10   14   27      9   10   11   11   14   14   17   19   21   23   27   31   34   37   42   46   52   56   59   61 
LCS_GDT     E   111_A     E   111_A     10   14   27      9   10   11   15   16   17   18   19   21   23   26   30   33   36   38   40   42   47   52   53 
LCS_GDT     A   112_A     A   112_A     10   14   30      9   10   11   14   16   17   18   19   21   23   27   30   33   36   38   40   42   45   49   51 
LCS_GDT     I   113_A     I   113_A     10   14   30      9   10   11   11   14   14   17   19   21   23   26   30   33   36   38   40   42   46   49   53 
LCS_GDT     A   114_A     A   114_A     10   14   30      9   10   11   11   14   14   16   19   21   23   26   29   33   36   38   40   42   45   49   51 
LCS_GDT     R   115_A     R   115_A     10   14   30      9   10   11   11   14   15   17   19   21   23   26   29   33   36   38   40   42   45   49   51 
LCS_GDT     F   116_A     F   116_A     10   14   30      9   10   11   11   14   15   17   19   21   23   26   29   33   36   38   40   42   45   49   51 
LCS_GDT     L   117_A     L   117_A     10   14   30      9   10   11   11   14   14   16   17   19   23   24   29   33   36   38   40   42   45   49   51 
LCS_GDT     G   118_A     G   118_A     10   14   36      3   10   10   11   14   14   16   17   19   22   24   28   33   36   38   40   42   45   49   51 
LCS_GDT     I   119_A     I   119_A      8   20   36      3    6    8   10   13   16   21   22   22   23   25   29   33   36   38   40   41   45   49   51 
LCS_GDT     S   120_A     S   120_A      8   20   36      3    6    9   11   15   19   21   22   22   27   30   32   34   36   37   40   41   45   49   51 
LCS_GDT     L   121_A     L   121_A     14   20   36      4    9   16   18   18   19   21   22   25   27   30   33   34   34   35   38   39   44   49   51 
LCS_GDT     E   122_A     E   122_A     17   20   36      4    7   12   18   18   19   21   22   25   27   30   33   34   34   35   36   40   44   49   51 
LCS_GDT     E   123_A     E   123_A     17   20   36      4   12   16   18   18   19   21   22   22   27   30   33   34   36   38   40   41   45   49   51 
LCS_GDT     V   124_A     V   124_A     17   20   36      4   15   16   18   18   19   21   22   25   27   30   33   34   36   42   44   47   48   49   53 
LCS_GDT     Q   125_A     Q   125_A     17   20   36     13   15   16   18   18   19   21   22   25   27   30   35   42   43   44   46   49   52   55   59 
LCS_GDT     E   126_A     E   126_A     17   20   36     13   15   16   18   18   19   21   22   22   25   29   33   34   36   38   41   43   47   51   53 
LCS_GDT     I   127_A     I   127_A     17   20   36     13   15   16   18   18   19   21   22   22   27   30   33   34   38   43   46   49   51   54   59 
LCS_GDT     I   128_A     I   128_A     17   20   36     13   15   16   18   18   19   21   22   25   33   39   41   43   48   50   53   55   57   61   63 
LCS_GDT     D   129_A     D   129_A     17   20   36     13   15   16   18   18   19   21   22   25   27   30   34   39   47   51   53   55   59   61   63 
LCS_GDT     A   130_A     A   130_A     17   20   36     13   15   16   18   18   19   21   22   22   25   30   33   34   38   43   49   54   57   61   63 
LCS_GDT     A   131_A     A   131_A     17   20   36     13   15   16   18   18   19   21   22   25   31   36   44   47   51   51   56   58   60   63   65 
LCS_GDT     R   132_A     R   132_A     17   20   36     13   15   16   18   18   19   22   27   32   35   41   44   47   51   51   56   58   60   63   65 
LCS_GDT     K   133_A     K   133_A     17   20   36     13   15   16   18   18   19   21   22   25   27   31   35   41   46   51   54   58   60   63   65 
LCS_GDT     A   134_A     A   134_A     17   20   36     13   15   16   18   18   19   21   22   25   27   31   35   41   48   51   56   58   60   63   65 
LCS_GDT     V   135_A     V   135_A     17   20   36     13   15   16   18   18   19   21   22   25   30   34   38   44   48   51   56   58   60   63   65 
LCS_GDT     K   136_A     K   136_A     17   20   36     13   15   16   18   18   19   21   22   25   27   30   33   34   43   46   51   54   60   63   65 
LCS_GDT     E   137_A     E   137_A     17   20   36     13   15   16   18   18   19   21   22   25   27   30   33   34   34   36   44   51   56   57   61 
LCS_GDT     G   138_A     G   138_A     17   20   36     12   15   16   18   18   19   21   22   25   27   30   33   34   34   35   38   46   53   56   60 
LCS_GDT     R   139_A     R   139_A      4   19   36      4    4    5    8   10   16   19   22   25   27   30   33   34   34   35   36   37   41   44   48 
LCS_GDT     G   140_A     G   140_A      4   15   36      4    4    5    8   14   19   21   22   25   27   30   33   34   34   35   36   36   38   43   59 
LCS_GDT     A   141_A     A   141_A     14   15   36      8   14   14   14   14   15   16   17   21   24   26   30   32   34   35   36   36   45   46   49 
LCS_GDT     S   142_A     S   142_A     14   15   36      8   14   14   14   14   15   16   20   25   27   30   33   34   34   35   36   36   43   51   56 
LCS_GDT     I   143_A     I   143_A     14   15   36      8   14   14   14   14   15   16   18   25   27   30   33   34   34   35   36   36   45   51   56 
LCS_GDT     G   144_A     G   144_A     14   15   36      8   14   14   14   14   15   16   21   27   37   41   44   47   51   51   56   58   59   63   65 
LCS_GDT     I   145_A     I   145_A     14   15   36      8   14   14   14   14   15   17   22   30   37   41   44   47   51   51   53   55   59   61   65 
LCS_GDT     Y   146_A     Y   146_A     14   15   36      8   14   14   14   14   15   16   20   25   27   30   33   37   44   48   50   53   55   55   59 
LCS_GDT     T   147_A     T   147_A     14   15   36      7   14   14   14   14   15   16   21   30   37   39   41   45   48   49   53   55   56   58   60 
LCS_GDT     K   148_A     K   148_A     14   15   36      8   14   14   14   14   15   16   21   30   37   39   41   45   48   49   53   55   56   58   62 
LCS_GDT     L   149_A     L   149_A     14   15   36      8   14   14   14   14   15   18   24   30   35   37   40   42   44   48   50   53   53   55   59 
LCS_GDT     R   150_A     R   150_A     14   15   36      7   14   14   14   14   15   16   22   30   32   36   39   42   44   48   50   53   53   53   59 
LCS_GDT     E   151_A     E   151_A     14   15   36      7   14   14   14   14   15   16   23   30   32   34   36   42   43   44   50   53   53   55   59 
LCS_GDT     L   152_A     L   152_A     14   15   36      7   14   14   14   14   15   16   20   25   27   30   33   34   36   37   42   45   47   49   51 
LCS_GDT     E   153_A     E   153_A     14   15   36      5   14   14   14   14   15   16   21   25   27   30   33   34   36   37   40   45   45   47   51 
LCS_GDT     E   154_A     E   154_A     14   15   36      7   14   14   14   14   15   16   21   25   27   30   33   34   34   37   40   42   45   46   51 
LCS_AVERAGE  LCS_A:  18.52  (  10.51   12.76   32.28 )

GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_AT     13     16     19     23     26     28     31     33     38     41     45     47     49     52     54     56     58     60     63     65 
GDT PERCENT_AT   9.22  11.35  13.48  16.31  18.44  19.86  21.99  23.40  26.95  29.08  31.91  33.33  34.75  36.88  38.30  39.72  41.13  42.55  44.68  46.10
GDT RMS_LOCAL    0.22   0.49   0.86   1.17   1.49   1.60   1.86   2.34   2.94   3.28   3.64   3.78   3.99   4.58   4.61   5.23   5.39   5.73   5.85   6.03
GDT RMS_ALL_AT  20.19  19.28  24.85  25.57  24.61  24.82  24.82  25.28  25.31  25.51  25.50  25.51  25.51  25.86  25.78  17.60  17.66  17.64  17.29  17.40

# Checking swapping
#   possible swapping detected:  D    12_A      D    12_A
#   possible swapping detected:  F    13_A      F    13_A
#   possible swapping detected:  Y    16_A      Y    16_A
#   possible swapping detected:  E    31_A      E    31_A
#   possible swapping detected:  Y    33_A      Y    33_A
#   possible swapping detected:  E    78_A      E    78_A
#   possible swapping detected:  E    79_A      E    79_A
#   possible swapping detected:  F    80_A      F    80_A
#   possible swapping detected:  F    83_A      F    83_A
#   possible swapping detected:  Y   102_A      Y   102_A
#   possible swapping detected:  E   107_A      E   107_A
#   possible swapping detected:  D   109_A      D   109_A
#   possible swapping detected:  E   111_A      E   111_A
#   possible swapping detected:  F   116_A      F   116_A
#   possible swapping detected:  E   122_A      E   122_A
#   possible swapping detected:  E   123_A      E   123_A
#   possible swapping detected:  E   137_A      E   137_A
#   possible swapping detected:  E   154_A      E   154_A

#      Molecule1      Molecule2  DISTANCE    Mis    MC     All    Dist_max   GDC_mc  GDC_all
LGA    A     9_A      A     9_A    15.989     0    0.043   0.042    17.843    0.000    0.000
LGA    V    10_A      V    10_A    12.461     0    0.029   1.243    13.887    0.000    0.000
LGA    E    11_A      E    11_A    17.944     0    0.048   0.976    25.677    0.000    0.000
LGA    D    12_A      D    12_A    16.971     0    0.188   1.339    21.695    0.000    0.000
LGA    F    13_A      F    13_A    10.284     0    0.063   1.282    12.576    1.548    4.805
LGA    H    14_A      H    14_A    10.600     0    0.088   1.117    19.103    0.000    0.000
LGA    K    15_A      K    15_A    14.473     0    0.041   1.585    23.983    0.000    0.000
LGA    Y    16_A      Y    16_A    11.314     0    0.035   0.507    22.445    1.429    0.476
LGA    H    17_A      H    17_A     5.972     0    0.046   1.135     8.278   16.786   15.619
LGA    T    18_A      T    18_A     9.336     0    0.040   1.208    13.292    3.452    1.973
LGA    A    19_A      A    19_A    10.205     0    0.033   0.043    12.239    2.500    2.000
LGA    L    20_A      L    20_A     6.505     0    0.047   1.438     9.448   17.738   12.560
LGA    V    21_A      V    21_A     6.132     0    0.034   1.050    10.100   18.452   11.973
LGA    V    22_A      V    22_A     7.914     0    0.035   0.117    11.283   10.952    6.327
LGA    R    23_A      R    23_A     6.930     0    0.604   1.855    15.045   18.810    7.316
LGA    L    24_A      L    24_A     8.774     0    0.602   1.460    14.959    4.881    2.440
LGA    A    25_A      A    25_A     7.613     0    0.483   0.487     8.189   11.667   11.333
LGA    G    26_A      G    26_A     2.446     0    0.543   0.543     3.877   59.405   59.405
LGA    V    27_A      V    27_A     2.313     0    0.032   0.082     2.825   62.857   61.497
LGA    P    28_A      P    28_A     3.273     0    0.062   0.104     3.822   50.000   48.095
LGA    P    29_A      P    29_A     3.653     0    0.632   0.530     6.451   36.905   42.517
LGA    H    30_A      H    30_A     3.178     0    0.611   1.216     5.306   59.286   43.857
LGA    E    31_A      E    31_A     5.550     0    0.169   0.614     9.523   23.214   11.693
LGA    R    32_A      R    32_A     8.376     0    0.065   0.625    14.085   10.357    3.766
LGA    Y    33_A      Y    33_A     4.805     0    0.090   1.104    14.384   41.190   17.817
LGA    E    34_A      E    34_A     1.947     0    0.049   0.857     7.665   61.905   40.212
LGA    R    35_A      R    35_A     7.323     0    0.023   1.446    14.144   13.333    4.978
LGA    L    36_A      L    36_A     7.496     0    0.035   0.940    11.865   17.738    9.226
LGA    D    37_A      D    37_A     2.073     0    0.039   0.999     5.003   76.310   58.869
LGA    R    38_A      R    38_A     4.847     0    0.048   1.551    14.308   34.048   13.333
LGA    W    39_A      W    39_A     7.750     0    0.026   1.629    14.321   13.690    4.082
LGA    I    40_A      I    40_A     5.156     0    0.047   0.120     9.130   38.095   24.167
LGA    T    41_A      T    41_A     1.146     0    0.050   1.206     4.922   75.357   60.884
LGA    E    42_A      E    42_A     6.116     0    0.074   1.115    15.023   23.214   10.635
LGA    Q    43_A      Q    43_A     6.561     0    0.046   0.982    13.825   23.095   10.847
LGA    L    44_A      L    44_A     2.387     0    0.028   1.345     7.927   73.929   48.452
LGA    I    45_A      I    45_A     3.654     0    0.098   1.160     9.390   47.619   29.583
LGA    Y    46_A      Y    46_A     6.820     0    0.183   1.372    16.476   23.095    7.817
LGA    R    52_A      R    52_A     4.634     0    0.594   0.940    16.675   35.833   14.372
LGA    D    53_A      D    53_A     3.418     0    0.135   0.190     4.479   53.810   47.083
LGA    E    54_A      E    54_A     2.060     0    0.066   0.837     3.683   64.881   64.709
LGA    W    55_A      W    55_A     2.317     0    0.038   0.299     3.173   70.952   59.048
LGA    I    56_A      I    56_A     1.646     0    0.043   1.399     5.282   79.405   65.893
LGA    D    57_A      D    57_A     0.871     0    0.041   0.386     1.448   90.595   90.595
LGA    A    58_A      A    58_A     0.688     0    0.062   0.061     1.201   92.857   90.571
LGA    L    59_A      L    59_A     0.712     0    0.032   1.008     4.006   92.857   81.667
LGA    A    60_A      A    60_A     0.764     0    0.029   0.046     1.445   88.333   86.952
LGA    E    61_A      E    61_A     1.761     0    0.050   0.832     2.693   72.976   66.720
LGA    A    62_A      A    62_A     1.933     0    0.091   0.091     2.043   72.857   71.238
LGA    A    63_A      A    63_A     1.279     0    0.029   0.040     1.514   79.286   79.714
LGA    G    64_A      G    64_A     1.348     0    0.090   0.090     1.389   81.429   81.429
LGA    I    65_A      I    65_A     1.262     0    0.067   1.269     3.769   81.429   73.869
LGA    F    66_A      F    66_A     1.133     0    0.082   0.446     3.165   85.952   73.506
LGA    K    67_A      K    67_A     0.675     0    0.030   1.113     6.365   90.476   72.063
LGA    E    68_A      E    68_A     1.107     0    0.060   0.222     3.191   85.952   73.492
LGA    A    69_A      A    69_A     1.086     0    0.035   0.036     1.280   85.952   85.048
LGA    L    70_A      L    70_A     0.702     0    0.056   0.093     0.993   90.476   90.476
LGA    E    71_A      E    71_A     0.661     0    0.184   0.199     1.683   86.071   83.598
LGA    R    72_A      R    72_A     0.988     0    0.538   0.891     6.582   86.071   55.195
LGA    N    73_A      N    73_A     2.815     0    0.198   1.120     6.890   39.762   37.143
LGA    I    74_A      I    74_A     8.071     0    0.074   1.397    11.461    9.643    4.881
LGA    T    75_A      T    75_A    10.283     0    0.738   1.411    14.013    0.119    0.068
LGA    T    76_A      T    76_A    17.368     0    0.030   0.066    19.758    0.000    0.000
LGA    P    77_A      P    77_A    20.997     0    0.056   0.372    23.628    0.000    0.000
LGA    E    78_A      E    78_A    24.739     0    0.105   1.021    31.764    0.000    0.000
LGA    E    79_A      E    79_A    19.625     0    0.095   0.863    21.036    0.000    0.000
LGA    F    80_A      F    80_A    16.136     0    0.031   1.334    18.236    0.000    0.000
LGA    N    81_A      N    81_A    22.756     0    0.035   0.868    28.045    0.000    0.000
LGA    A    82_A      A    82_A    25.335     0    0.066   0.064    25.979    0.000    0.000
LGA    F    83_A      F    83_A    19.711     0    0.047   1.436    21.160    0.000    0.000
LGA    L    84_A      L    84_A    19.086     0    0.035   1.036    21.951    0.000    0.000
LGA    K    85_A      K    85_A    26.580     0    0.113   0.895    32.308    0.000    0.000
LGA    E    86_A      E    86_A    27.586     0    0.038   1.055    30.110    0.000    0.000
LGA    K    87_A      K    87_A    22.296     0    0.054   1.594    23.672    0.000    0.000
LGA    G    88_A      G    88_A    25.356     0    0.093   0.093    25.714    0.000    0.000
LGA    K    89_A      K    89_A    26.672     0    0.529   1.248    28.591    0.000    0.000
LGA    R    90_A      R    90_A    24.773     0    0.587   1.504    25.438    0.000    0.000
LGA    A    91_A      A    91_A    24.135     0    0.150   0.142    25.593    0.000    0.000
LGA    V    92_A      V    92_A    27.726     0    0.077   0.080    32.247    0.000    0.000
LGA    D    93_A      D    93_A    24.547     0    0.083   0.971    25.714    0.000    0.000
LGA    L    94_A      L    94_A    17.664     0    0.055   0.114    20.375    0.000    0.000
LGA    V    95_A      V    95_A    19.022     0    0.026   0.993    22.143    0.000    0.000
LGA    A    96_A      A    96_A    23.917     0    0.064   0.062    26.021    0.000    0.000
LGA    T    97_A      T    97_A    19.270     0    0.028   0.085    20.575    0.000    0.000
LGA    L    98_A      L    98_A    15.183     0    0.027   0.873    17.284    0.000    0.060
LGA    T    99_A      T    99_A    21.159     0    0.066   1.211    24.198    0.000    0.000
LGA    N   100_A      N   100_A    25.031     0    0.098   1.134    27.950    0.000    0.000
LGA    A   101_A      A   101_A    20.525     0    0.033   0.051    22.193    0.000    0.000
LGA    Y   102_A      Y   102_A    21.023     0    0.045   1.587    24.872    0.000    0.000
LGA    I   103_A      I   103_A    28.296     0    0.029   0.866    31.512    0.000    0.000
LGA    A   104_A      A   104_A    29.316     0    0.052   0.051    31.104    0.000    0.000
LGA    V   105_A      V   105_A    26.743     0    0.034   0.134    30.090    0.000    0.000
LGA    L   106_A      L   106_A    30.047     0    0.148   1.506    34.494    0.000    0.000
LGA    E   107_A      E   107_A    36.389     0    0.297   1.079    39.815    0.000    0.000
LGA    G   108_A      G   108_A    38.285     0    0.505   0.505    40.238    0.000    0.000
LGA    D   109_A      D   109_A    41.284     0    0.276   1.163    43.886    0.000    0.000
LGA    P   110_A      P   110_A    42.385     0    0.061   0.358    46.065    0.000    0.000
LGA    E   111_A      E   111_A    43.823     0    0.026   1.085    51.505    0.000    0.000
LGA    A   112_A      A   112_A    37.436     0    0.031   0.038    39.843    0.000    0.000
LGA    I   113_A      I   113_A    34.087     0    0.031   1.244    35.828    0.000    0.000
LGA    A   114_A      A   114_A    38.004     0    0.034   0.047    40.825    0.000    0.000
LGA    R   115_A      R   115_A    35.396     0    0.073   1.083    43.931    0.000    0.000
LGA    F   116_A      F   116_A    28.605     0    0.025   1.384    31.301    0.000    0.000
LGA    L   117_A      L   117_A    29.633     0    0.197   0.926    31.158    0.000    0.000
LGA    G   118_A      G   118_A    32.771     0    0.358   0.358    32.771    0.000    0.000
LGA    I   119_A      I   119_A    32.831     0    0.035   1.197    35.076    0.000    0.000
LGA    S   120_A      S   120_A    35.680     0    0.080   0.650    36.642    0.000    0.000
LGA    L   121_A      L   121_A    39.467     0    0.093   0.951    40.943    0.000    0.000
LGA    E   122_A      E   122_A    41.280     0    0.063   1.193    43.089    0.000    0.000
LGA    E   123_A      E   123_A    37.068     0    0.053   1.082    38.222    0.000    0.000
LGA    V   124_A      V   124_A    37.181     0    0.060   0.108    38.824    0.000    0.000
LGA    Q   125_A      Q   125_A    42.530     0    0.074   1.261    46.633    0.000    0.000
LGA    E   126_A      E   126_A    40.925     0    0.041   0.823    45.210    0.000    0.000
LGA    I   127_A      I   127_A    35.230     0    0.034   0.671    37.146    0.000    0.000
LGA    I   128_A      I   128_A    38.785     0    0.035   1.297    42.264    0.000    0.000
LGA    D   129_A      D   129_A    42.934     0    0.045   0.930    48.371    0.000    0.000
LGA    A   130_A      A   130_A    38.129     0    0.018   0.038    39.607    0.000    0.000
LGA    A   131_A      A   131_A    34.553     0    0.038   0.057    36.173    0.000    0.000
LGA    R   132_A      R   132_A    40.122     0    0.050   0.749    52.207    0.000    0.000
LGA    K   133_A      K   133_A    41.184     0    0.034   0.800    43.214    0.000    0.000
LGA    A   134_A      A   134_A    34.902     0    0.060   0.059    36.979    0.000    0.000
LGA    V   135_A      V   135_A    35.425     0    0.040   0.103    37.088    0.000    0.000
LGA    K   136_A      K   136_A    40.881     0    0.098   0.568    49.344    0.000    0.000
LGA    E   137_A      E   137_A    38.055     0    0.274   0.664    39.650    0.000    0.000
LGA    G   138_A      G   138_A    33.269     0    0.208   0.208    34.922    0.000    0.000
LGA    R   139_A      R   139_A    36.045     0    0.199   0.937    42.248    0.000    0.000
LGA    G   140_A      G   140_A    34.775     0    0.058   0.058    38.562    0.000    0.000
LGA    A   141_A      A   141_A    39.883     0    0.616   0.600    40.597    0.000    0.000
LGA    S   142_A      S   142_A    39.572     0    0.093   0.666    39.837    0.000    0.000
LGA    I   143_A      I   143_A    40.625     0    0.623   0.786    42.331    0.000    0.000
LGA    G   144_A      G   144_A    40.696     0    0.116   0.116    40.696    0.000    0.000
LGA    I   145_A      I   145_A    38.872     0    0.065   1.022    39.683    0.000    0.000
LGA    Y   146_A      Y   146_A    39.323     0    0.035   0.708    39.667    0.000    0.000
LGA    T   147_A      T   147_A    40.432     0    0.028   1.019    42.311    0.000    0.000
LGA    K   148_A      K   148_A    39.745     0    0.051   1.160    40.211    0.000    0.000
LGA    L   149_A      L   149_A    38.915     0    0.027   1.402    39.688    0.000    0.000
LGA    R   150_A      R   150_A    40.452     0    0.034   1.671    45.195    0.000    0.000
LGA    E   151_A      E   151_A    40.987     0    0.060   0.984    43.065    0.000    0.000
LGA    L   152_A      L   152_A    39.717     0    0.031   1.402    40.578    0.000    0.000
LGA    E   153_A      E   153_A    40.301     0    0.118   0.281    40.704    0.000    0.000
LGA    E   154_A      E   154_A    41.750     0    0.125   1.165    42.464    0.000    0.000

# RMSD_GDC results:       CA      MC common percent     ALL common percent   GDC_mc  GDC_all
NUMBER_OF_ATOMS_AA:      141     564    564  100.00    1131   1131  100.00               141
SUMMARY(RMSD_GDC):    14.593         14.563                 15.405           19.084   15.872

#CA            N1   N2   DIST      N    RMSD    GDT_TS    LGA_S3     LGA_Q 
SUMMARY(GDT)  158  141    4.0     33    2.34    22.695    20.843     1.353

LGA_LOCAL      RMSD:   2.338  Number of atoms:   33  under DIST:   4.00
LGA_ASGN_ATOMS RMSD:  25.284  Number of assigned atoms:  141 
Std_ASGN_ATOMS RMSD:  14.593  Standard rmsd on all 141 assigned CA atoms 

Unitary ROTATION matrix and the SHIFT vector superimpose molecules  (1=>2)
  X_new =  -0.042579 * X  +   0.990062 * Y  +   0.134034 * Z  + -56.161060
  Y_new =  -0.113059 * X  +   0.128519 * Y  +  -0.985241 * Z  + -10.203344
  Z_new =  -0.992675 * X  +  -0.057105 * Y  +   0.106464 * Z  +  51.155251 

Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ:
           Phi     Theta       Psi   [DEG:       Phi     Theta       Psi ]
XYZ: -1.930978  1.449689 -0.492325   [DEG: -110.6369   83.0611  -28.2081 ]
ZXZ:  0.135212  1.464131 -1.628259   [DEG:    7.7470   83.8885  -93.2924 ]
 
# END of job
