
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  ------------ 10/2009               #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

!!!   License for LGA program has expired  !!!
#   For updated version of the LGA program   #
# please contact Adam Zemla:  adamz@llnl.gov #

# Molecule1: number of CA atoms  158 ( 1264),  selected  141 , name one
# Molecule2: number of CA atoms  141 ( 1131),  selected  141 , name two
# PARAMETERS: input.pdb  -ie  -3  -d:4  -sda  -swap  -ch1:A  -ch2:A  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    56      13_A - 73_A        4.97    25.96
  LONGEST_CONTINUOUS_SEGMENT:    56      14_A - 74_A        4.98    25.82
  LCS_AVERAGE:     32.65

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    23      46_A - 73_A        2.00    26.07
  LCS_AVERAGE:     12.88

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    20      53_A - 72_A        0.98    24.75
  LCS_AVERAGE:     10.52

LCS_GDT    MOLECULE-1    MOLECULE-2     LCS_DETAILS     GDT_DETAILS                                                    TOTAL NUMBER OF RESIDUE PAIRS:  141
LCS_GDT     RESIDUE       RESIDUE       SEGMENT_SIZE    GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair
LCS_GDT   NAME NUMBER   NAME NUMBER    1.0  2.0  5.0    0.5  1.0  1.5  2.0  2.5  3.0  3.5  4.0  4.5  5.0  5.5  6.0  6.5  7.0  7.5  8.0  8.5  9.0  9.5 10.0
LCS_GDT     A     9_A     A     9_A     15   17   38      5    9   15   16   18   20   24   27   31   34   38   45   48   51   51   54   58   60   63   65 
LCS_GDT     V    10_A     V    10_A     15   17   38      5   10   15   16   16   17   20   25   31   34   38   42   45   49   53   55   58   60   63   65 
LCS_GDT     E    11_A     E    11_A     15   17   38      5    5   15   16   16   17   18   21   29   34   38   42   45   49   51   54   58   60   63   65 
LCS_GDT     D    12_A     D    12_A     15   17   38      6   12   15   16   16   17   21   25   29   34   38   42   45   49   51   54   58   60   63   65 
LCS_GDT     F    13_A     F    13_A     15   17   56      6   12   15   16   16   17   18   21   24   27   38   42   50   52   54   55   57   59   63   65 
LCS_GDT     H    14_A     H    14_A     15   17   56      6   12   15   16   16   17   18   21   24   30   38   42   49   52   54   55   57   59   63   65 
LCS_GDT     K    15_A     K    15_A     15   17   56      7   12   15   16   16   17   18   22   29   33   38   42   45   49   51   53   57   59   63   65 
LCS_GDT     Y    16_A     Y    16_A     15   17   56      7   12   15   16   16   17   17   20   24   30   38   42   45   49   53   55   57   59   63   65 
LCS_GDT     H    17_A     H    17_A     15   17   56      7   12   15   16   16   17   17   28   35   42   44   47   50   52   54   55   57   59   60   64 
LCS_GDT     T    18_A     T    18_A     15   17   56      7   12   15   16   16   17   17   19   23   27   33   45   50   52   54   55   57   59   60   62 
LCS_GDT     A    19_A     A    19_A     15   17   56      7   12   15   16   16   17   17   20   26   32   34   41   50   52   54   55   57   59   60   62 
LCS_GDT     L    20_A     L    20_A     15   17   56      6   12   15   16   16   17   17   20   24   31   43   47   50   52   54   55   57   59   60   62 
LCS_GDT     V    21_A     V    21_A     15   17   56      7   12   15   16   16   17   17   20   37   42   44   47   50   52   54   55   56   59   60   61 
LCS_GDT     V    22_A     V    22_A     15   17   56      7   12   15   16   16   17   17   19   23   26   44   47   50   52   54   55   57   59   60   61 
LCS_GDT     R    23_A     R    23_A     15   17   56      6   12   15   16   16   17   17   20   33   39   44   47   50   52   54   55   56   56   59   61 
LCS_GDT     L    24_A     L    24_A      5   17   56      4    4    5    6   10   14   17   20   24   27   31   34   46   52   54   55   56   56   57   57 
LCS_GDT     A    25_A     A    25_A      5   17   56      4    4    5    6    8   12   16   20   24   27   36   47   50   52   54   55   56   56   57   57 
LCS_GDT     G    26_A     G    26_A      5    6   56      6   14   17   22   27   28   31   34   37   42   44   47   50   52   54   55   56   56   59   61 
LCS_GDT     V    27_A     V    27_A      5    6   56      3    5    6   21   27   28   31   34   37   42   44   47   50   52   54   55   56   56   57   59 
LCS_GDT     P    28_A     P    28_A      5   19   56      3    5    5    6   27   28   31   34   37   42   44   47   50   52   54   55   56   56   57   57 
LCS_GDT     P    29_A     P    29_A      5   19   56      3    5    5    6   14   28   31   34   37   42   44   47   50   52   54   55   56   56   57   57 
LCS_GDT     H    30_A     H    30_A     17   19   56      5    7   15   17   27   28   31   34   37   42   44   47   50   52   54   55   56   56   57   57 
LCS_GDT     E    31_A     E    31_A     17   19   56     14   16   16   17   20   25   29   34   37   42   44   47   50   52   54   55   56   56   57   57 
LCS_GDT     R    32_A     R    32_A     17   19   56     14   16   16   17   19   20   21   25   26   37   42   46   50   52   54   55   56   56   57   57 
LCS_GDT     Y    33_A     Y    33_A     17   19   56     14   16   16   17   19   20   21   31   37   42   44   47   50   52   54   55   56   56   57   57 
LCS_GDT     E    34_A     E    34_A     17   19   56     14   16   19   23   25   28   31   34   37   42   44   47   50   52   54   55   56   56   57   57 
LCS_GDT     R    35_A     R    35_A     17   19   56     14   16   16   17   19   21   28   31   37   42   44   47   50   52   54   55   56   56   57   57 
LCS_GDT     L    36_A     L    36_A     17   19   56     14   16   16   17   19   20   21   25   29   39   44   47   50   52   54   55   56   56   57   57 
LCS_GDT     D    37_A     D    37_A     17   19   56     14   16   16   22   27   28   31   34   37   42   44   47   50   52   54   55   56   56   57   57 
LCS_GDT     R    38_A     R    38_A     17   19   56     14   16   16   19   23   25   31   34   37   42   44   47   50   52   54   55   56   56   57   57 
LCS_GDT     W    39_A     W    39_A     17   19   56     14   16   16   17   19   20   22   31   37   42   44   47   50   52   54   55   56   56   57   57 
LCS_GDT     I    40_A     I    40_A     17   19   56     14   16   16   17   19   20   21   34   37   42   44   47   50   52   54   55   56   56   57   57 
LCS_GDT     T    41_A     T    41_A     17   19   56     14   16   19   23   25   28   31   34   37   42   44   47   50   52   54   55   56   56   57   57 
LCS_GDT     E    42_A     E    42_A     17   19   56     14   16   16   17   19   22   28   34   37   42   44   47   50   52   54   55   56   56   57   57 
LCS_GDT     Q    43_A     Q    43_A     17   19   56     14   16   16   17   19   20   21   34   37   42   44   47   50   52   54   55   56   56   57   57 
LCS_GDT     L    44_A     L    44_A     17   19   56     14   16   16   23   27   28   31   34   37   42   44   47   50   52   54   55   56   56   57   60 
LCS_GDT     I    45_A     I    45_A     17   19   56      9   16   16   17   23   26   31   34   37   42   44   47   50   52   54   55   56   56   57   60 
LCS_GDT     Y    46_A     Y    46_A     17   23   56      9   16   16   17   19   20   28   34   37   42   44   47   50   52   54   55   56   56   57   58 
LCS_GDT     R    52_A     R    52_A     19   23   56      4   10   16   20   27   28   31   31   34   40   44   47   50   52   54   55   58   60   63   65 
LCS_GDT     D    53_A     D    53_A     20   23   56     10   12   19   23   27   28   31   34   37   42   44   47   50   52   54   55   58   60   63   65 
LCS_GDT     E    54_A     E    54_A     20   23   56     10   13   19   23   27   28   31   34   37   42   44   47   50   52   54   55   58   60   63   65 
LCS_GDT     W    55_A     W    55_A     20   23   56     10   13   19   23   27   28   31   34   37   42   44   47   50   52   54   55   58   60   63   65 
LCS_GDT     I    56_A     I    56_A     20   23   56     10   13   19   23   27   28   31   34   37   42   44   47   50   52   54   55   58   60   63   65 
LCS_GDT     D    57_A     D    57_A     20   23   56     10   13   19   23   27   28   31   34   37   42   44   47   50   52   54   55   58   60   63   65 
LCS_GDT     A    58_A     A    58_A     20   23   56     10   15   19   23   27   28   31   34   37   42   44   47   50   52   54   55   58   60   63   65 
LCS_GDT     L    59_A     L    59_A     20   23   56     10   15   19   23   27   28   31   34   37   42   44   47   50   52   54   55   58   60   63   65 
LCS_GDT     A    60_A     A    60_A     20   23   56     10   15   19   23   27   28   31   34   37   42   44   47   50   52   54   55   58   60   63   65 
LCS_GDT     E    61_A     E    61_A     20   23   56     10   15   19   23   27   28   31   34   37   42   44   47   50   52   54   55   58   60   63   65 
LCS_GDT     A    62_A     A    62_A     20   23   56     10   15   19   23   27   28   31   34   37   42   44   47   50   52   54   55   58   60   63   65 
LCS_GDT     A    63_A     A    63_A     20   23   56     10   15   19   23   27   28   31   34   37   42   44   47   50   52   54   55   58   60   63   65 
LCS_GDT     G    64_A     G    64_A     20   23   56     10   15   19   23   27   28   31   34   37   42   44   47   50   52   54   55   58   60   63   65 
LCS_GDT     I    65_A     I    65_A     20   23   56      8   15   19   23   27   28   31   34   37   42   44   47   50   52   54   55   58   60   63   65 
LCS_GDT     F    66_A     F    66_A     20   23   56     10   15   19   23   27   28   31   34   37   42   44   47   50   52   54   55   58   60   63   65 
LCS_GDT     K    67_A     K    67_A     20   23   56     10   15   19   23   27   28   31   34   37   42   44   47   50   52   54   55   58   60   63   65 
LCS_GDT     E    68_A     E    68_A     20   23   56     10   15   19   23   27   28   31   34   37   42   44   47   50   52   54   55   58   60   62   65 
LCS_GDT     A    69_A     A    69_A     20   23   56     10   15   19   23   27   28   31   34   37   42   44   47   50   52   54   55   58   60   63   65 
LCS_GDT     L    70_A     L    70_A     20   23   56     10   15   19   23   27   28   31   34   37   42   44   47   50   52   54   55   58   60   63   65 
LCS_GDT     E    71_A     E    71_A     20   23   56     10   15   19   23   27   28   31   34   37   42   44   47   50   52   54   55   58   60   63   65 
LCS_GDT     R    72_A     R    72_A     20   23   56     10   15   19   23   27   28   31   34   37   42   44   47   50   52   54   55   58   60   63   65 
LCS_GDT     N    73_A     N    73_A     19   23   56      3    4   17   20   25   28   31   34   37   42   44   47   50   52   54   55   58   60   63   65 
LCS_GDT     I    74_A     I    74_A      4   22   56      3    4    6    8   13   16   25   30   37   41   44   45   48   51   51   54   58   60   63   65 
LCS_GDT     T    75_A     T    75_A     14   16   55      5   11   14   15   18   20   24   27   31   37   41   45   48   51   51   54   58   60   63   65 
LCS_GDT     T    76_A     T    76_A     14   16   53      8   14   15   15   18   20   24   27   31   37   41   45   48   51   51   54   58   60   63   65 
LCS_GDT     P    77_A     P    77_A     14   16   49      8   14   15   15   18   20   24   27   31   37   41   45   48   51   51   54   58   60   63   65 
LCS_GDT     E    78_A     E    78_A     14   16   49      8   14   15   15   18   20   24   27   31   37   41   45   48   51   51   54   58   60   63   65 
LCS_GDT     E    79_A     E    79_A     14   16   49      9   14   15   15   18   20   24   27   31   37   41   45   48   51   51   54   58   60   63   65 
LCS_GDT     F    80_A     F    80_A     14   16   49      9   14   15   15   18   20   24   27   31   37   41   45   48   51   51   54   58   60   63   65 
LCS_GDT     N    81_A     N    81_A     14   16   49      9   14   15   15   18   20   24   27   31   37   41   45   48   51   51   54   58   60   63   65 
LCS_GDT     A    82_A     A    82_A     14   16   49      9   14   15   15   18   20   24   27   31   37   41   45   48   51   51   54   58   60   63   65 
LCS_GDT     F    83_A     F    83_A     14   16   49      9   14   15   15   18   20   24   27   31   37   41   45   48   51   51   54   58   60   63   65 
LCS_GDT     L    84_A     L    84_A     14   16   49      9   14   15   15   18   20   24   27   31   37   41   45   48   51   51   54   58   60   63   65 
LCS_GDT     K    85_A     K    85_A     14   16   49      9   14   15   15   18   20   24   27   31   37   41   45   48   51   51   54   58   60   63   65 
LCS_GDT     E    86_A     E    86_A     14   16   49      9   14   15   15   18   20   24   27   31   37   41   45   48   51   51   54   58   60   63   65 
LCS_GDT     K    87_A     K    87_A     14   16   49      9   14   15   15   17   20   24   27   31   37   41   45   48   51   51   54   58   60   63   65 
LCS_GDT     G    88_A     G    88_A     14   16   49      9   14   15   15   16   17   19   25   28   35   41   44   47   51   51   54   58   60   63   65 
LCS_GDT     K    89_A     K    89_A      4   16   49      3    3    4    6   14   19   24   27   31   37   41   44   48   51   51   54   58   60   63   65 
LCS_GDT     R    90_A     R    90_A      4   18   49      3    4    7    8   13   17   22   26   31   34   41   44   47   51   51   54   58   60   63   65 
LCS_GDT     A    91_A     A    91_A     16   18   49      3    4   11   15   17   17   19   21   22   26   34   42   45   49   51   53   57   60   63   65 
LCS_GDT     V    92_A     V    92_A     16   18   49      7   14   17   17   17   18   20   23   23   25   27   34   38   44   49   53   57   59   63   65 
LCS_GDT     D    93_A     D    93_A     16   18   49      7   14   17   17   17   18   21   23   25   31   34   42   45   49   51   54   58   60   63   65 
LCS_GDT     L    94_A     L    94_A     16   18   49     12   14   17   17   17   18   22   26   31   37   41   45   48   51   51   54   58   60   63   65 
LCS_GDT     V    95_A     V    95_A     16   18   49     12   14   17   17   19   20   21   24   30   37   41   45   48   51   51   54   58   60   63   65 
LCS_GDT     A    96_A     A    96_A     16   18   49     12   14   17   17   19   20   24   27   31   37   41   45   48   51   51   54   58   60   63   65 
LCS_GDT     T    97_A     T    97_A     16   18   49     12   14   17   17   18   20   24   27   31   37   41   45   48   51   51   54   58   60   63   65 
LCS_GDT     L    98_A     L    98_A     16   18   49     12   14   17   17   17   19   24   27   31   37   41   45   48   51   51   54   58   60   63   65 
LCS_GDT     T    99_A     T    99_A     16   18   49     12   14   17   17   17   18   24   27   31   37   41   45   48   51   51   54   58   60   63   65 
LCS_GDT     N   100_A     N   100_A     16   18   49     12   14   17   17   18   20   24   27   31   34   38   42   47   51   51   54   58   60   63   65 
LCS_GDT     A   101_A     A   101_A     16   18   49     12   14   17   17   17   18   20   25   29   34   38   42   45   49   51   54   58   60   63   65 
LCS_GDT     Y   102_A     Y   102_A     16   18   46     12   14   17   17   17   18   20   23   24   27   37   42   45   49   51   53   57   60   63   65 
LCS_GDT     I   103_A     I   103_A     16   18   32     12   14   17   17   17   18   20   23   24   33   38   42   45   49   51   53   57   59   63   65 
LCS_GDT     A   104_A     A   104_A     16   18   32     12   14   17   17   17   18   20   23   24   27   38   42   45   49   51   53   57   59   61   64 
LCS_GDT     V   105_A     V   105_A     16   18   31     12   14   17   17   17   18   20   23   24   26   33   33   43   49   51   53   57   59   60   62 
LCS_GDT     L   106_A     L   106_A     16   18   27      8   14   17   17   17   18   20   23   24   25   33   33   36   45   51   53   57   59   60   61 
LCS_GDT     E   107_A     E   107_A     16   18   27      8   12   17   17   17   18   20   23   24   26   33   33   42   49   51   53   57   59   60   61 
LCS_GDT     G   108_A     G   108_A      4   18   27      3    4    8   11   14   15   18   23   23   24   26   30   34   38   44   46   51   53   59   61 
LCS_GDT     D   109_A     D   109_A     10   14   27      9   11   15   16   16   16   17   19   22   24   29   32   34   37   44   45   48   51   59   61 
LCS_GDT     P   110_A     P   110_A     10   14   27      9   10   10   12   14   14   17   19   21   24   27   32   34   37   40   45   52   55   59   61 
LCS_GDT     E   111_A     E   111_A     10   14   27      9   10   10   12   15   17   17   19   21   24   26   30   34   36   39   40   42   48   51   51 
LCS_GDT     A   112_A     A   112_A     10   14   30      9   10   10   12   14   17   17   19   21   24   26   30   34   36   39   40   42   45   49   51 
LCS_GDT     I   113_A     I   113_A     10   14   30      9   10   10   12   14   14   16   19   21   24   26   30   34   36   39   40   42   45   49   51 
LCS_GDT     A   114_A     A   114_A     10   14   30      9   10   10   12   14   14   16   19   21   24   26   29   34   36   39   40   42   45   49   51 
LCS_GDT     R   115_A     R   115_A     10   14   30      9   10   10   12   14   15   16   19   21   24   26   29   34   36   39   40   42   45   49   51 
LCS_GDT     F   116_A     F   116_A     10   14   30      9   10   10   12   14   15   16   19   21   23   26   29   34   36   39   40   42   45   49   51 
LCS_GDT     L   117_A     L   117_A     10   14   30      9   10   10   12   14   14   16   16   19   23   25   29   34   36   39   40   42   45   49   51 
LCS_GDT     G   118_A     G   118_A     10   14   36      3   10   10   12   14   14   16   17   19   22   25   28   34   36   39   40   42   45   49   51 
LCS_GDT     I   119_A     I   119_A      8   20   36      3    6    8   10   12   17   21   22   22   23   25   30   34   36   39   40   42   45   49   51 
LCS_GDT     S   120_A     S   120_A      8   20   36      3    7    9   13   15   19   21   22   22   26   30   33   34   36   38   40   42   45   49   51 
LCS_GDT     L   121_A     L   121_A     17   20   36      5    9   17   18   18   19   21   22   25   27   30   33   34   34   35   38   40   44   49   51 
LCS_GDT     E   122_A     E   122_A     17   20   36      3    7   13   18   18   19   21   22   25   27   30   33   34   34   35   36   41   44   49   51 
LCS_GDT     E   123_A     E   123_A     17   20   36      5   11   17   18   18   19   21   22   22   26   30   33   34   36   39   40   42   45   49   51 
LCS_GDT     V   124_A     V   124_A     17   20   36      3   15   17   18   18   19   21   22   25   27   30   33   34   36   42   44   47   48   49   53 
LCS_GDT     Q   125_A     Q   125_A     17   20   36     13   15   17   18   18   19   21   22   25   27   30   33   41   43   44   46   49   51   55   59 
LCS_GDT     E   126_A     E   126_A     17   20   36     13   15   17   18   18   19   21   22   22   24   29   33   34   36   39   41   42   47   51   53 
LCS_GDT     I   127_A     I   127_A     17   20   36     13   15   17   18   18   19   21   22   22   23   30   33   35   40   43   45   49   51   54   59 
LCS_GDT     I   128_A     I   128_A     17   20   36     13   15   17   18   18   19   21   22   25   32   39   41   44   48   50   54   55   56   60   63 
LCS_GDT     D   129_A     D   129_A     17   20   36     13   15   17   18   18   19   21   22   25   27   30   34   38   47   51   53   55   58   62   63 
LCS_GDT     A   130_A     A   130_A     17   20   36     13   15   17   18   18   19   21   22   22   24   30   33   34   38   41   49   54   58   62   63 
LCS_GDT     A   131_A     A   131_A     17   20   36     13   15   17   18   18   19   21   22   25   32   37   45   48   51   51   54   58   60   63   65 
LCS_GDT     R   132_A     R   132_A     17   20   36     13   15   17   18   18   19   21   27   31   34   41   45   48   51   51   54   58   60   63   65 
LCS_GDT     K   133_A     K   133_A     17   20   36     13   15   17   18   18   19   21   22   25   27   30   36   42   45   51   54   58   60   63   65 
LCS_GDT     A   134_A     A   134_A     17   20   36     13   15   17   18   18   19   21   22   25   27   30   36   42   47   51   54   58   60   63   65 
LCS_GDT     V   135_A     V   135_A     17   20   36     13   15   17   18   18   19   21   22   25   27   33   38   43   48   51   54   58   60   63   65 
LCS_GDT     K   136_A     K   136_A     17   20   36     13   15   17   18   18   19   21   22   25   27   30   33   34   42   47   51   54   59   62   64 
LCS_GDT     E   137_A     E   137_A     17   20   36     13   15   17   18   18   19   21   22   25   27   30   33   34   34   36   44   51   56   58   61 
LCS_GDT     G   138_A     G   138_A     17   20   36     10   15   17   18   18   19   21   22   25   27   30   33   34   34   35   39   46   52   56   60 
LCS_GDT     R   139_A     R   139_A      4   19   36      4    4    5    8   10   17   19   22   25   27   30   33   34   34   35   36   38   41   44   48 
LCS_GDT     G   140_A     G   140_A      4   15   36      4    4    5    9   15   19   21   22   25   27   30   33   34   34   35   36   36   41   42   58 
LCS_GDT     A   141_A     A   141_A     14   15   36      8   14   14   14   14   15   15   17   21   24   26   30   32   34   35   36   43   44   46   48 
LCS_GDT     S   142_A     S   142_A     14   15   36      9   14   14   14   14   15   16   20   25   27   30   33   34   34   35   36   36   44   51   56 
LCS_GDT     I   143_A     I   143_A     14   15   36      9   14   14   14   14   15   15   19   25   27   30   33   34   34   35   36   36   45   51   56 
LCS_GDT     G   144_A     G   144_A     14   15   36      7   14   14   14   14   15   15   22   28   37   41   45   48   51   51   54   58   60   63   65 
LCS_GDT     I   145_A     I   145_A     14   15   36      9   14   14   14   14   15   16   22   31   37   41   45   48   51   51   54   55   58   61   64 
LCS_GDT     Y   146_A     Y   146_A     14   15   36      9   14   14   14   14   15   16   20   25   27   30   34   38   42   48   50   53   55   56   59 
LCS_GDT     T   147_A     T   147_A     14   15   36      9   14   14   14   14   15   16   22   31   37   39   41   45   48   50   54   55   56   58   60 
LCS_GDT     K   148_A     K   148_A     14   15   36      9   14   14   14   14   15   16   22   31   37   39   41   45   48   50   54   55   56   58   63 
LCS_GDT     L   149_A     L   149_A     14   15   36      9   14   14   14   14   15   17   24   30   35   38   40   41   43   48   50   51   53   56   59 
LCS_GDT     R   150_A     R   150_A     14   15   36      9   14   14   14   14   15   16   23   30   31   35   40   41   43   48   50   50   53   53   59 
LCS_GDT     E   151_A     E   151_A     14   15   36      9   14   14   14   14   15   16   20   30   31   34   36   39   43   44   50   50   53   55   59 
LCS_GDT     L   152_A     L   152_A     14   15   36      7   14   14   14   14   15   16   20   25   27   30   33   34   36   37   42   45   47   49   51 
LCS_GDT     E   153_A     E   153_A     14   15   36      5   14   14   14   14   15   15   20   25   27   30   33   34   36   37   40   45   45   47   50 
LCS_GDT     E   154_A     E   154_A     14   15   36      7   14   14   14   14   15   16   20   25   27   30   33   34   34   37   39   42   45   47   51 
LCS_AVERAGE  LCS_A:  18.68  (  10.52   12.88   32.65 )

GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_AT     14     16     19     23     27     28     31     34     37     42     44     47     50     52     54     55     58     60     63     65 
GDT PERCENT_AT   9.93  11.35  13.48  16.31  19.15  19.86  21.99  24.11  26.24  29.79  31.21  33.33  35.46  36.88  38.30  39.01  41.13  42.55  44.68  46.10
GDT RMS_LOCAL    0.24   0.42   0.89   1.16   1.53   1.55   1.79   2.47   2.80   3.29   3.46   3.73   4.05   4.34   4.56   4.75   5.40   5.57   5.86   6.04
GDT RMS_ALL_AT  19.31  19.26  24.90  25.53  24.67  24.85  24.83  25.40  25.39  25.42  25.45  25.50  25.51  25.69  25.77  25.85  17.69  17.62  17.24  17.43

# Checking swapping
#   possible swapping detected:  D    12_A      D    12_A
#   possible swapping detected:  Y    16_A      Y    16_A
#   possible swapping detected:  E    31_A      E    31_A
#   possible swapping detected:  E    34_A      E    34_A
#   possible swapping detected:  E    42_A      E    42_A
#   possible swapping detected:  D    53_A      D    53_A
#   possible swapping detected:  E    71_A      E    71_A
#   possible swapping detected:  E    79_A      E    79_A
#   possible swapping detected:  F    80_A      F    80_A
#   possible swapping detected:  F    83_A      F    83_A
#   possible swapping detected:  E    86_A      E    86_A
#   possible swapping detected:  Y   102_A      Y   102_A
#   possible swapping detected:  E   107_A      E   107_A
#   possible swapping detected:  D   109_A      D   109_A
#   possible swapping detected:  E   111_A      E   111_A
#   possible swapping detected:  E   122_A      E   122_A
#   possible swapping detected:  E   123_A      E   123_A
#   possible swapping detected:  D   129_A      D   129_A
#   possible swapping detected:  E   154_A      E   154_A

#      Molecule1      Molecule2  DISTANCE    Mis    MC     All    Dist_max   GDC_mc  GDC_all
LGA    A     9_A      A     9_A    15.547     0    0.073   0.070    17.429    0.000    0.000
LGA    V    10_A      V    10_A    12.175     0    0.044   1.235    13.639    0.000    0.000
LGA    E    11_A      E    11_A    17.689     0    0.034   1.448    22.436    0.000    0.000
LGA    D    12_A      D    12_A    16.637     0    0.183   1.274    20.703    0.000    0.000
LGA    F    13_A      F    13_A     9.670     0    0.024   1.222    12.105    1.667   18.961
LGA    H    14_A      H    14_A    10.490     0    0.092   0.094    19.190    0.000    0.000
LGA    K    15_A      K    15_A    14.485     0    0.049   1.558    24.788    0.000    0.000
LGA    Y    16_A      Y    16_A    11.315     0    0.039   1.246    21.199    1.429    0.476
LGA    H    17_A      H    17_A     5.902     0    0.046   1.157     8.192   16.786   15.952
LGA    T    18_A      T    18_A     9.298     0    0.037   1.175    13.130    2.976    1.701
LGA    A    19_A      A    19_A    10.342     0    0.033   0.040    12.375    2.500    2.000
LGA    L    20_A      L    20_A     6.543     0    0.036   1.419     9.758   18.929   12.440
LGA    V    21_A      V    21_A     6.001     0    0.038   1.036     9.958   18.452   12.313
LGA    V    22_A      V    22_A     7.932     0    0.028   0.131    11.421   10.952    6.259
LGA    R    23_A      R    23_A     6.937     0    0.602   1.249    18.476   18.810    7.316
LGA    L    24_A      L    24_A     8.572     0    0.099   1.442    14.797    5.476    2.738
LGA    A    25_A      A    25_A     6.897     0    0.153   0.153     7.529   19.524   18.286
LGA    G    26_A      G    26_A     1.245     0    0.708   0.708     3.186   73.690   73.690
LGA    V    27_A      V    27_A     2.222     0    0.034   0.060     3.002   66.786   61.633
LGA    P    28_A      P    28_A     3.187     0    0.086   0.127     3.730   50.119   48.163
LGA    P    29_A      P    29_A     3.677     0    0.632   0.770     6.412   36.905   40.612
LGA    H    30_A      H    30_A     3.287     0    0.583   1.198     5.527   57.262   40.952
LGA    E    31_A      E    31_A     5.289     0    0.171   1.138    11.065   25.476   12.434
LGA    R    32_A      R    32_A     8.435     0    0.107   1.185    15.545    9.524    3.463
LGA    Y    33_A      Y    33_A     5.300     0    0.042   1.279    10.832   36.905   16.349
LGA    E    34_A      E    34_A     1.379     0    0.051   1.307     8.032   69.286   41.905
LGA    R    35_A      R    35_A     6.810     0    0.031   1.571    11.282   17.024    7.056
LGA    L    36_A      L    36_A     7.333     0    0.044   1.430    12.701   17.738    9.345
LGA    D    37_A      D    37_A     2.391     0    0.031   0.261     6.270   72.262   52.619
LGA    R    38_A      R    38_A     3.978     0    0.022   1.407    15.773   44.167   17.879
LGA    W    39_A      W    39_A     7.020     0    0.019   1.404    13.101   17.500    5.102
LGA    I    40_A      I    40_A     5.113     0    0.031   0.628     8.963   37.738   23.214
LGA    T    41_A      T    41_A     1.413     0    0.055   1.200     4.992   77.143   60.952
LGA    E    42_A      E    42_A     5.108     0    0.056   0.879    12.897   33.452   15.714
LGA    Q    43_A      Q    43_A     6.050     0    0.062   1.017    13.819   27.857   13.175
LGA    L    44_A      L    44_A     2.919     0    0.033   1.336     8.745   65.357   41.369
LGA    I    45_A      I    45_A     3.063     0    0.090   1.166     8.909   59.643   37.262
LGA    Y    46_A      Y    46_A     5.571     0    0.174   1.389    14.178   36.429   12.698
LGA    R    52_A      R    52_A     5.475     0    0.596   1.347    16.033   28.810   11.039
LGA    D    53_A      D    53_A     3.969     0    0.129   1.120     6.492   45.476   35.714
LGA    E    54_A      E    54_A     2.829     0    0.053   0.798     3.932   57.262   54.868
LGA    W    55_A      W    55_A     2.905     0    0.025   0.231     4.552   61.190   45.884
LGA    I    56_A      I    56_A     2.151     0    0.044   1.364     5.301   69.048   58.690
LGA    D    57_A      D    57_A     1.269     0    0.034   0.499     2.276   83.810   80.536
LGA    A    58_A      A    58_A     1.114     0    0.058   0.058     1.728   81.429   79.714
LGA    L    59_A      L    59_A     0.987     0    0.028   1.457     4.932   90.595   72.798
LGA    A    60_A      A    60_A     0.656     0    0.029   0.047     1.307   88.333   86.952
LGA    E    61_A      E    61_A     1.625     0    0.040   1.147     4.222   72.976   66.296
LGA    A    62_A      A    62_A     1.947     0    0.119   0.117     2.164   72.857   71.238
LGA    A    63_A      A    63_A     1.204     0    0.028   0.040     1.472   83.690   83.238
LGA    G    64_A      G    64_A     1.294     0    0.096   0.096     1.335   81.429   81.429
LGA    I    65_A      I    65_A     1.263     0    0.077   1.303     3.773   81.429   72.738
LGA    F    66_A      F    66_A     1.141     0    0.091   0.141     3.512   85.952   70.087
LGA    K    67_A      K    67_A     0.709     0    0.026   1.196     6.627   90.476   71.640
LGA    E    68_A      E    68_A     1.437     0    0.067   0.777     2.745   81.429   73.122
LGA    A    69_A      A    69_A     1.292     0    0.041   0.041     1.412   83.690   83.238
LGA    L    70_A      L    70_A     0.835     0    0.059   0.101     0.961   90.476   90.476
LGA    E    71_A      E    71_A     1.055     0    0.192   0.802     3.569   81.548   69.153
LGA    R    72_A      R    72_A     1.281     0    0.557   1.202     9.267   79.524   50.952
LGA    N    73_A      N    73_A     2.281     0    0.095   1.350     6.089   45.952   39.405
LGA    I    74_A      I    74_A     7.255     0    0.074   1.347    10.621   13.929    7.321
LGA    T    75_A      T    75_A     9.731     0    0.737   1.068    13.560    0.476    0.272
LGA    T    76_A      T    76_A    16.830     0    0.038   0.078    19.151    0.000    0.000
LGA    P    77_A      P    77_A    20.578     0    0.046   0.365    23.231    0.000    0.000
LGA    E    78_A      E    78_A    24.371     0    0.096   1.209    29.639    0.000    0.000
LGA    E    79_A      E    79_A    19.252     0    0.082   0.935    20.640    0.000    0.000
LGA    F    80_A      F    80_A    15.874     0    0.036   1.348    18.035    0.000    0.000
LGA    N    81_A      N    81_A    22.586     0    0.032   0.956    27.762    0.000    0.000
LGA    A    82_A      A    82_A    25.024     0    0.041   0.042    25.525    0.000    0.000
LGA    F    83_A      F    83_A    19.518     0    0.044   1.447    20.884    0.000    0.000
LGA    L    84_A      L    84_A    19.060     0    0.040   0.933    22.003    0.000    0.000
LGA    K    85_A      K    85_A    26.562     0    0.095   1.019    34.204    0.000    0.000
LGA    E    86_A      E    86_A    27.396     0    0.030   1.105    29.163    0.000    0.000
LGA    K    87_A      K    87_A    22.410     0    0.041   1.116    23.746    0.000    0.000
LGA    G    88_A      G    88_A    25.524     0    0.114   0.114    26.044    0.000    0.000
LGA    K    89_A      K    89_A    27.191     0    0.539   1.043    27.839    0.000    0.000
LGA    R    90_A      R    90_A    25.150     0    0.575   1.168    25.903    0.000    0.000
LGA    A    91_A      A    91_A    24.335     0    0.117   0.108    25.713    0.000    0.000
LGA    V    92_A      V    92_A    28.115     0    0.113   0.101    32.571    0.000    0.000
LGA    D    93_A      D    93_A    25.047     0    0.075   1.043    26.734    0.000    0.000
LGA    L    94_A      L    94_A    18.156     0    0.054   1.090    20.872    0.000    0.000
LGA    V    95_A      V    95_A    19.346     0    0.029   0.101    20.872    0.000    0.000
LGA    A    96_A      A    96_A    24.260     0    0.062   0.060    26.386    0.000    0.000
LGA    T    97_A      T    97_A    19.688     0    0.021   0.083    20.972    0.000    0.000
LGA    L    98_A      L    98_A    15.546     0    0.033   0.923    17.575    0.000    0.000
LGA    T    99_A      T    99_A    21.434     0    0.063   1.211    24.533    0.000    0.000
LGA    N   100_A      N   100_A    25.277     0    0.104   1.111    29.046    0.000    0.000
LGA    A   101_A      A   101_A    20.712     0    0.031   0.049    22.318    0.000    0.000
LGA    Y   102_A      Y   102_A    21.163     0    0.049   1.573    24.958    0.000    0.000
LGA    I   103_A      I   103_A    28.400     0    0.030   0.875    31.646    0.000    0.000
LGA    A   104_A      A   104_A    29.393     0    0.056   0.056    31.149    0.000    0.000
LGA    V   105_A      V   105_A    26.793     0    0.033   0.117    30.124    0.000    0.000
LGA    L   106_A      L   106_A    30.066     0    0.141   1.514    34.471    0.000    0.000
LGA    E   107_A      E   107_A    36.478     0    0.280   0.943    39.899    0.000    0.000
LGA    G   108_A      G   108_A    38.243     0    0.497   0.497    40.418    0.000    0.000
LGA    D   109_A      D   109_A    41.557     0    0.276   1.132    44.878    0.000    0.000
LGA    P   110_A      P   110_A    42.399     0    0.025   0.346    45.882    0.000    0.000
LGA    E   111_A      E   111_A    44.244     0    0.046   0.956    51.780    0.000    0.000
LGA    A   112_A      A   112_A    37.778     0    0.032   0.038    40.177    0.000    0.000
LGA    I   113_A      I   113_A    34.451     0    0.034   1.238    36.206    0.000    0.000
LGA    A   114_A      A   114_A    38.447     0    0.041   0.056    41.288    0.000    0.000
LGA    R   115_A      R   115_A    36.036     0    0.072   1.350    42.688    0.000    0.000
LGA    F   116_A      F   116_A    29.155     0    0.029   1.332    31.875    0.000    0.000
LGA    L   117_A      L   117_A    30.010     0    0.181   1.060    31.410    0.000    0.000
LGA    G   118_A      G   118_A    33.451     0    0.381   0.381    33.451    0.000    0.000
LGA    I   119_A      I   119_A    33.583     0    0.033   1.186    35.977    0.000    0.000
LGA    S   120_A      S   120_A    36.746     0    0.086   0.588    37.889    0.000    0.000
LGA    L   121_A      L   121_A    40.675     0    0.089   0.966    42.369    0.000    0.000
LGA    E   122_A      E   122_A    42.362     0    0.060   1.291    45.058    0.000    0.000
LGA    E   123_A      E   123_A    37.647     0    0.067   1.109    39.025    0.000    0.000
LGA    V   124_A      V   124_A    37.780     0    0.060   0.096    39.341    0.000    0.000
LGA    Q   125_A      Q   125_A    43.007     0    0.076   1.193    47.785    0.000    0.000
LGA    E   126_A      E   126_A    41.233     0    0.059   0.836    45.601    0.000    0.000
LGA    I   127_A      I   127_A    35.604     0    0.035   0.639    37.493    0.000    0.000
LGA    I   128_A      I   128_A    39.085     0    0.036   1.317    41.283    0.000    0.000
LGA    D   129_A      D   129_A    43.242     0    0.049   1.345    48.252    0.000    0.000
LGA    A   130_A      A   130_A    38.375     0    0.020   0.042    39.868    0.000    0.000
LGA    A   131_A      A   131_A    34.795     0    0.037   0.058    36.380    0.000    0.000
LGA    R   132_A      R   132_A    40.308     0    0.047   1.244    52.372    0.000    0.000
LGA    K   133_A      K   133_A    41.257     0    0.034   1.556    47.642    0.000    0.000
LGA    A   134_A      A   134_A    34.876     0    0.063   0.064    37.008    0.000    0.000
LGA    V   135_A      V   135_A    35.252     0    0.055   1.208    36.885    0.000    0.000
LGA    K   136_A      K   136_A    40.663     0    0.094   0.873    48.681    0.000    0.000
LGA    E   137_A      E   137_A    37.807     0    0.273   0.889    38.987    0.000    0.000
LGA    G   138_A      G   138_A    32.896     0    0.204   0.204    34.611    0.000    0.000
LGA    R   139_A      R   139_A    35.703     0    0.219   1.496    44.950    0.000    0.000
LGA    G   140_A      G   140_A    34.400     0    0.064   0.064    38.282    0.000    0.000
LGA    A   141_A      A   141_A    39.615     0    0.615   0.600    40.338    0.000    0.000
LGA    S   142_A      S   142_A    39.523     0    0.078   0.685    40.127    0.000    0.000
LGA    I   143_A      I   143_A    40.236     0    0.630   0.774    41.444    0.000    0.000
LGA    G   144_A      G   144_A    40.289     0    0.117   0.117    40.289    0.000    0.000
LGA    I   145_A      I   145_A    38.887     0    0.065   1.113    39.982    0.000    0.000
LGA    Y   146_A      Y   146_A    39.577     0    0.061   1.139    40.060    0.000    0.000
LGA    T   147_A      T   147_A    40.331     0    0.027   1.023    42.034    0.000    0.000
LGA    K   148_A      K   148_A    39.836     0    0.050   1.265    41.726    0.000    0.000
LGA    L   149_A      L   149_A    39.328     0    0.030   0.926    39.739    0.000    0.000
LGA    R   150_A      R   150_A    40.638     0    0.032   1.295    44.884    0.000    0.000
LGA    E   151_A      E   151_A    41.059     0    0.049   0.858    41.907    0.000    0.000
LGA    L   152_A      L   152_A    40.129     0    0.036   0.187    40.626    0.000    0.000
LGA    E   153_A      E   153_A    40.814     0    0.114   0.809    42.874    0.000    0.000
LGA    E   154_A      E   154_A    42.035     0    0.124   1.125    42.658    0.000    0.000

# RMSD_GDC results:       CA      MC common percent     ALL common percent   GDC_mc  GDC_all
NUMBER_OF_ATOMS_AA:      141     564    564  100.00    1131   1131  100.00               141
SUMMARY(RMSD_GDC):    14.606         14.570                 15.414           19.160   15.538

#CA            N1   N2   DIST      N    RMSD    GDT_TS    LGA_S3     LGA_Q 
SUMMARY(GDT)  158  141    4.0     34    2.47    22.695    20.934     1.322

LGA_LOCAL      RMSD:   2.472  Number of atoms:   34  under DIST:   4.00
LGA_ASGN_ATOMS RMSD:  25.401  Number of assigned atoms:  141 
Std_ASGN_ATOMS RMSD:  14.606  Standard rmsd on all 141 assigned CA atoms 

Unitary ROTATION matrix and the SHIFT vector superimpose molecules  (1=>2)
  X_new =  -0.077141 * X  +   0.991684 * Y  +   0.103015 * Z  + -55.047623
  Y_new =  -0.051731 * X  +   0.099202 * Y  +  -0.993722 * Z  + -10.906112
  Z_new =  -0.995677 * X  +  -0.081985 * Y  +   0.043649 * Z  +  52.065773 

Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ:
           Phi     Theta       Psi   [DEG:       Phi     Theta       Psi ]
XYZ: -2.550863  1.477781 -1.081568   [DEG: -146.1537   84.6706  -61.9693 ]
ZXZ:  0.103297  1.527134 -1.652952   [DEG:    5.9185   87.4983  -94.7072 ]
 
# END of job
