
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  ------------ 10/2009               #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

!!!   License for LGA program has expired  !!!
#   For updated version of the LGA program   #
# please contact Adam Zemla:  adamz@llnl.gov #

# Molecule1: number of CA atoms  164 ( 1284),  selected  151 , name one
# Molecule2: number of CA atoms  151 ( 1194),  selected  151 , name two
# PARAMETERS: input.pdb  -ie  -3  -d:4  -sda  -swap  -ch1:A  -ch2:A  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    50      71_A - 120_A       4.99    17.85
  LCS_AVERAGE:     29.24

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    28      86_A - 113_A       1.96    18.09
  LCS_AVERAGE:     14.74

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    21      54_A - 74_A        0.95    19.78
  LCS_AVERAGE:     10.68

LCS_GDT    MOLECULE-1    MOLECULE-2     LCS_DETAILS     GDT_DETAILS                                                    TOTAL NUMBER OF RESIDUE PAIRS:  151
LCS_GDT     RESIDUE       RESIDUE       SEGMENT_SIZE    GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair
LCS_GDT   NAME NUMBER   NAME NUMBER    1.0  2.0  5.0    0.5  1.0  1.5  2.0  2.5  3.0  3.5  4.0  4.5  5.0  5.5  6.0  6.5  7.0  7.5  8.0  8.5  9.0  9.5 10.0
LCS_GDT     Q    11_A     Q    11_A      3   14   20      3    3    4    5    6   13   14   20   20   27   32   35   37   42   46   49   55   60   64   70 
LCS_GDT     A    12_A     A    12_A      4   14   22      3    4    4    6   11   12   16   20   21   24   26   31   32   39   46   50   56   60   69   77 
LCS_GDT     V    13_A     V    13_A     11   14   22      4    8   11   11   12   13   15   20   21   31   34   38   42   46   47   51   56   60   69   76 
LCS_GDT     E    14_A     E    14_A     11   14   22      4   10   16   20   23   27   32   35   37   39   40   42   44   48   51   52   57   64   71   78 
LCS_GDT     D    15_A     D    15_A     11   14   22      7   10   11   11   16   29   29   32   34   38   41   44   46   49   52   55   61   65   71   78 
LCS_GDT     F    16_A     F    16_A     11   14   22      4   10   11   11   16   29   30   32   35   38   41   44   46   49   52   55   61   65   71   78 
LCS_GDT     L    17_A     L    17_A     11   14   22      7   10   11   21   27   28   32   35   37   39   40   42   46   49   51   53   59   64   71   78 
LCS_GDT     R    18_A     R    18_A     11   14   22      7   10   11   11   12   13   14   32   36   38   40   44   46   49   52   55   61   65   71   78 
LCS_GDT     V    19_A     V    19_A     11   14   22      7   10   11   11   12   20   28   32   36   38   41   44   47   52   54   58   63   67   72   78 
LCS_GDT     H    20_A     H    20_A     11   14   22      7   10   11   11   12   24   29   32   36   38   41   44   49   52   56   62   66   71   74   78 
LCS_GDT     S    21_A     S    21_A     11   14   22      7   10   11   11   12   13   14   16   21   29   32   35   37   39   47   55   62   67   71   74 
LCS_GDT     E    22_A     E    22_A     11   14   30      7   10   11   11   21   24   27   28   30   36   42   44   49   52   56   62   66   71   74   77 
LCS_GDT     L    23_A     L    23_A     11   14   30      3   10   14   19   21   23   25   28   30   38   42   44   49   52   56   62   66   71   74   77 
LCS_GDT     V    24_A     V    24_A     11   14   30      3    7    9   11   12   18   22   26   30   33   37   42   48   51   56   62   66   71   74   76 
LCS_GDT     H    25_A     H    25_A      7   13   30      5    7    8    8   12   18   22   26   30   33   37   42   47   51   56   59   66   71   74   76 
LCS_GDT     R    26_A     R    26_A      7   13   30      5   17   18   19   21   22   22   27   31   35   39   44   48   51   56   62   66   71   74   76 
LCS_GDT     L    27_A     L    27_A      7   10   30      5    7    8   13   22   25   29   33   37   39   42   44   47   51   56   59   66   71   74   76 
LCS_GDT     A    28_A     A    28_A      7   10   30      5    7   14   18   23   28   32   33   37   39   42   44   47   51   56   58   61   65   68   71 
LCS_GDT     G    29_A     G    29_A      7   10   30      5    7    8   12   22   25   32   33   37   39   42   44   47   51   56   58   61   65   68   71 
LCS_GDT     D    30_A     D    30_A      5    7   30      3    5    5    8   12   18   26   30   33   37   39   44   47   51   56   58   61   68   74   76 
LCS_GDT     P    31_A     P    31_A      5    7   30      3    5    5    8   11   12   14   15   17   21   33   37   45   51   56   58   61   66   74   76 
LCS_GDT     P    32_A     P    32_A      5   20   44      3    5    5    8   15   22   22   24   26   28   36   39   45   50   56   62   66   71   74   76 
LCS_GDT     D    33_A     D    33_A     18   20   44      0    9   11   16   19   21   22   24   31   38   42   44   49   52   56   62   66   71   74   76 
LCS_GDT     E    34_A     E    34_A     18   20   44     11   17   18   19   21   22   22   24   26   28   29   36   44   50   55   58   63   67   72   75 
LCS_GDT     L    35_A     L    35_A     18   20   44      4   17   18   19   21   22   22   24   26   28   29   31   34   42   48   58   62   67   72   76 
LCS_GDT     F    36_A     F    36_A     18   20   44      7   17   18   19   21   22   22   24   26   28   33   39   45   50   56   60   66   71   74   77 
LCS_GDT     Q    37_A     Q    37_A     18   20   44     13   17   18   19   21   22   22   24   31   38   42   44   49   52   56   62   66   71   74   78 
LCS_GDT     R    38_A     R    38_A     18   20   44     13   17   18   19   21   22   22   24   36   38   41   44   49   52   56   62   66   71   74   78 
LCS_GDT     L    39_A     L    39_A     18   20   44     13   17   18   19   21   22   22   24   36   38   41   44   47   51   56   62   66   71   74   78 
LCS_GDT     D    40_A     D    40_A     18   20   44     13   17   18   19   21   22   22   24   31   38   42   44   49   52   56   62   66   71   74   78 
LCS_GDT     R    41_A     R    41_A     18   20   44     13   17   18   19   21   22   22   27   31   38   42   44   49   52   56   62   66   71   74   78 
LCS_GDT     F    42_A     F    42_A     18   20   44     13   17   18   19   21   22   22   25   33   38   42   44   49   52   56   62   66   71   74   78 
LCS_GDT     V    43_A     V    43_A     18   20   44     13   17   18   19   21   22   22   24   26   36   41   44   48   51   56   62   66   71   74   78 
LCS_GDT     T    44_A     T    44_A     18   20   44     13   17   18   19   21   22   22   24   26   29   37   44   48   51   56   62   66   71   74   78 
LCS_GDT     D    45_A     D    45_A     18   20   44     13   17   18   19   21   22   22   24   31   38   42   44   49   52   56   62   66   71   74   78 
LCS_GDT     A    46_A     A    46_A     18   20   44     13   17   18   19   21   22   22   25   31   38   42   44   49   52   56   62   66   71   74   78 
LCS_GDT     I    47_A     I    47_A     18   20   44     13   17   18   19   21   22   22   24   26   28   30   34   41   50   55   59   64   67   71   78 
LCS_GDT     I    48_A     I    48_A     18   20   44     13   17   18   19   21   22   22   24   26   28   29   31   39   45   55   59   64   67   71   78 
LCS_GDT     E    49_A     E    49_A     18   20   44     13   17   18   19   21   22   22   24   31   38   42   44   48   52   56   60   66   71   74   78 
LCS_GDT     G    50_A     G    50_A     18   20   44      5   17   18   19   21   22   22   24   26   28   34   40   47   50   55   59   64   67   71   78 
LCS_GDT     N    51_A     N    51_A      6   24   47      5    6    6    8   15   21   24   28   31   38   42   44   49   52   56   60   64   71   74   78 
LCS_GDT     P    52_A     P    52_A      6   24   47      5    6    9   14   19   23   26   28   31   38   42   44   49   52   56   62   66   71   74   78 
LCS_GDT     E    53_A     E    53_A      6   24   47      5    6    6    7   11   22   26   28   30   38   42   44   49   52   56   62   66   71   74   76 
LCS_GDT     R    54_A     R    54_A     21   24   47      8   16   20   21   23   25   27   28   30   37   42   44   49   52   56   60   66   71   74   76 
LCS_GDT     R    55_A     R    55_A     21   24   47      8   16   20   21   23   25   27   28   31   38   42   44   49   52   56   62   66   71   74   78 
LCS_GDT     D    56_A     D    56_A     21   24   47      8   16   20   21   23   25   27   28   31   38   42   44   49   52   56   62   66   71   74   76 
LCS_GDT     E    57_A     E    57_A     21   24   47      8   16   20   21   23   25   27   28   30   38   42   44   49   52   56   62   66   71   74   76 
LCS_GDT     I    58_A     I    58_A     21   24   47      8   16   20   21   23   25   27   28   30   38   42   44   49   52   56   62   66   71   74   78 
LCS_GDT     K    59_A     K    59_A     21   24   47      8   16   20   21   23   25   27   28   31   38   42   44   49   52   56   62   66   71   74   78 
LCS_GDT     A    60_A     A    60_A     21   24   47      8   16   20   21   23   25   27   28   31   38   42   44   49   52   56   62   66   71   74   76 
LCS_GDT     D    61_A     D    61_A     21   24   47      8   16   20   21   23   25   27   28   30   38   42   44   49   52   56   62   66   71   74   76 
LCS_GDT     L    62_A     L    62_A     21   24   47      7   16   20   21   23   25   27   28   31   38   42   44   49   52   56   62   66   71   74   78 
LCS_GDT     A    63_A     A    63_A     21   24   47      7   16   20   21   23   25   27   28   31   38   42   44   49   52   56   62   66   71   74   76 
LCS_GDT     R    64_A     R    64_A     21   24   47      7   16   20   21   23   25   27   28   31   38   42   44   49   52   56   62   66   71   74   76 
LCS_GDT     A    65_A     A    65_A     21   24   47      7   16   20   21   23   25   27   28   31   38   42   44   49   52   56   62   66   71   74   78 
LCS_GDT     A    66_A     A    66_A     21   24   47      7   16   20   21   23   25   27   28   31   38   42   44   49   52   56   62   66   71   74   78 
LCS_GDT     R    67_A     R    67_A     21   24   47      7   16   20   21   23   25   27   28   31   38   42   44   49   52   56   62   66   71   74   76 
LCS_GDT     V    68_A     V    68_A     21   24   48      7   16   20   21   23   25   27   30   34   38   42   44   49   52   56   62   66   71   74   78 
LCS_GDT     F    69_A     F    69_A     21   24   48      7   16   20   21   23   25   27   29   34   38   42   44   49   52   56   62   66   71   74   78 
LCS_GDT     G    70_A     G    70_A     21   24   48      7   16   20   21   23   25   27   28   31   38   42   44   49   52   56   62   66   71   74   78 
LCS_GDT     E    71_A     E    71_A     21   24   50      5   15   20   21   23   25   28   33   37   39   42   44   49   52   56   62   66   71   74   76 
LCS_GDT     A    72_A     A    72_A     21   24   50      5   15   20   21   23   29   33   34   37   39   42   44   49   52   56   62   66   71   74   78 
LCS_GDT     L    73_A     L    73_A     21   24   50      4   15   20   21   23   25   27   28   31   38   42   44   49   52   56   62   66   71   74   78 
LCS_GDT     E    74_A     E    74_A     21   24   50      4   16   20   21   23   25   27   28   31   39   42   44   49   52   56   62   66   71   74   78 
LCS_GDT     R    75_A     R    75_A     15   24   50      3    7   14   22   26   30   33   34   37   39   42   44   49   52   56   62   66   71   74   78 
LCS_GDT     D    76_A     D    76_A      3   17   50      3    9   18   22   26   30   33   34   37   39   42   44   48   51   56   60   66   71   74   77 
LCS_GDT     I    77_A     I    77_A     11   17   50      3    4    8   22   26   30   33   34   37   39   42   44   48   51   56   60   66   71   74   78 
LCS_GDT     T    78_A     T    78_A     14   17   50      5    9   14   15   16   20   25   32   32   34   38   42   46   49   54   59   64   67   73   76 
LCS_GDT     T    79_A     T    79_A     14   17   50      8   13   14   15   16   20   22   26   30   33   37   41   43   47   52   57   61   64   68   73 
LCS_GDT     P    80_A     P    80_A     14   17   50      8   13   14   15   16   20   22   26   30   33   37   41   43   47   52   57   61   64   69   72 
LCS_GDT     E    81_A     E    81_A     14   17   50      8   13   14   15   16   20   22   26   30   33   36   40   43   47   52   55   60   64   69   73 
LCS_GDT     D    82_A     D    82_A     14   17   50      8   13   14   15   16   20   26   32   33   37   40   44   47   51   56   60   66   71   74   78 
LCS_GDT     F    83_A     F    83_A     14   17   50      8   13   14   15   16   22   28   32   36   38   41   44   47   51   56   62   66   71   74   78 
LCS_GDT     N    84_A     N    84_A     14   17   50      8   13   14   15   16   20   22   26   30   33   37   41   44   49   56   58   64   71   74   77 
LCS_GDT     A    85_A     A    85_A     14   17   50      8   13   14   15   16   20   26   32   34   38   41   44   47   51   56   62   66   71   74   78 
LCS_GDT     F    86_A     F    86_A     14   28   50      8   13   14   22   26   30   33   34   37   39   42   44   49   52   56   62   66   71   74   78 
LCS_GDT     L    87_A     L    87_A     14   28   50      6   13   14   15   20   29   33   34   37   39   42   44   47   51   56   62   66   71   74   78 
LCS_GDT     R    88_A     R    88_A     14   28   50      6   13   14   22   26   30   33   34   37   39   42   44   47   51   56   58   64   71   74   76 
LCS_GDT     E    89_A     E    89_A     14   28   50      6   13   14   15   24   30   33   34   37   39   42   44   47   51   56   62   66   71   74   76 
LCS_GDT     L    90_A     L    90_A     14   28   50      6   13   14   15   16   20   26   34   37   39   42   44   47   51   56   58   63   71   74   76 
LCS_GDT     G    91_A     G    91_A     14   28   50      6   13   14   15   17   26   33   34   37   39   42   43   45   49   54   58   61   64   68   71 
LCS_GDT     P    92_A     P    92_A     20   28   50      3    3   13   22   26   30   33   34   37   39   42   44   47   51   56   58   61   65   69   76 
LCS_GDT     E    93_A     E    93_A     20   28   50      4   12   20   22   26   30   33   34   37   39   42   44   47   51   56   58   61   65   69   76 
LCS_GDT     A    94_A     A    94_A     20   28   50     11   15   20   22   26   30   33   34   37   39   42   44   47   51   56   62   66   71   74   76 
LCS_GDT     V    95_A     V    95_A     20   28   50      4   11   20   22   25   30   33   34   37   39   42   44   47   51   56   62   66   71   74   76 
LCS_GDT     E    96_A     E    96_A     20   28   50     11   15   20   22   26   30   33   34   37   39   42   44   47   51   56   62   66   71   74   76 
LCS_GDT     L    97_A     L    97_A     20   28   50     11   15   20   22   26   30   33   34   37   39   42   44   47   51   56   62   66   71   74   76 
LCS_GDT     V    98_A     V    98_A     20   28   50     11   15   20   22   26   30   33   34   37   39   42   44   49   52   56   62   66   71   74   76 
LCS_GDT     S    99_A     S    99_A     20   28   50     11   15   20   22   26   30   33   34   37   39   42   44   49   52   56   62   66   71   74   76 
LCS_GDT     T   100_A     T   100_A     20   28   50     11   15   20   22   26   30   33   34   37   39   42   44   48   52   56   62   66   71   74   76 
LCS_GDT     F   101_A     F   101_A     20   28   50     11   15   20   22   26   30   33   34   37   39   42   44   49   52   56   62   66   71   74   76 
LCS_GDT     T   102_A     T   102_A     20   28   50     11   15   20   22   26   30   33   34   37   39   42   44   49   52   56   62   66   71   74   78 
LCS_GDT     Q   103_A     Q   103_A     20   28   50     11   15   20   22   26   30   33   34   37   39   42   44   49   52   56   62   66   71   74   76 
LCS_GDT     Q   104_A     Q   104_A     20   28   50     11   15   20   22   26   30   33   34   37   39   42   44   49   52   56   62   66   71   74   76 
LCS_GDT     F   105_A     F   105_A     20   28   50     11   15   20   22   26   30   33   34   37   39   42   44   49   52   56   62   66   71   74   78 
LCS_GDT     V   106_A     V   106_A     20   28   50      7   15   20   22   26   30   33   34   37   39   42   44   49   52   56   62   66   71   74   76 
LCS_GDT     D   107_A     D   107_A     20   28   50     11   15   20   22   26   30   33   34   37   39   42   44   49   52   56   62   66   71   74   76 
LCS_GDT     V   108_A     V   108_A     20   28   50      9   15   20   22   26   30   33   34   37   39   42   44   49   52   56   62   66   71   74   78 
LCS_GDT     I   109_A     I   109_A     20   28   50      7   15   20   22   26   30   33   34   37   39   42   44   47   51   56   58   63   68   74   78 
LCS_GDT     R   110_A     R   110_A     20   28   50      7   15   20   22   26   30   33   34   37   39   42   44   49   52   56   62   66   71   74   76 
LCS_GDT     G   111_A     G   111_A     20   28   50      7   15   19   22   26   30   33   34   37   39   42   44   49   52   56   62   66   71   74   76 
LCS_GDT     D   112_A     D   112_A     20   28   50      5    8   18   22   26   30   33   34   37   39   42   44   47   51   56   58   63   68   74   78 
LCS_GDT     P   113_A     P   113_A     20   28   50      5   13   20   22   26   30   33   34   37   39   42   44   47   51   56   58   61   66   74   78 
LCS_GDT     Q   114_A     Q   114_A      5   27   50      5    5    5    5    8   14   24   33   37   39   42   44   45   51   55   58   62   66   74   78 
LCS_GDT     A   115_A     A   115_A      5   27   50      5    5    7   15   22   25   27   31   37   37   42   43   45   48   51   58   61   65   71   78 
LCS_GDT     V   116_A     V   116_A      5   27   50      5    5    5    5    8   10   12   25   27   34   38   43   44   48   51   55   61   63   69   78 
LCS_GDT     A   117_A     A   117_A      4   27   50      5   11   20   22   25   30   33   34   37   39   42   43   45   48   52   56   61   65   71   78 
LCS_GDT     E   118_A     E   118_A      4   27   50      5   14   20   22   25   30   33   34   37   39   42   43   45   47   51   56   61   65   71   78 
LCS_GDT     H   119_A     H   119_A      4    6   50      3    4    6   11   21   25   27   31   35   37   39   40   44   47   51   56   61   64   69   78 
LCS_GDT     L   120_A     L   120_A      4    6   50      3    4    5    7   11   24   28   31   33   37   38   40   43   47   51   55   61   64   66   74 
LCS_GDT     N   121_A     N   121_A      3    6   48      3    4    4    4    5   13   22   25   31   33   36   39   42   47   51   56   61   64   66   70 
LCS_GDT     I   122_A     I   122_A      3   27   45      3    9   15   17   19   23   25   30   33   37   41   44   46   49   52   56   61   65   71   78 
LCS_GDT     S   123_A     S   123_A     20   27   45      8   15   19   22   27   29   32   35   37   39   41   44   46   49   52   56   61   65   71   78 
LCS_GDT     L   124_A     L   124_A     20   27   45     12   17   19   21   27   29   32   35   37   39   41   44   46   49   52   56   61   65   71   78 
LCS_GDT     E   125_A     E   125_A     20   27   45      8   17   19   22   27   29   32   35   37   39   41   44   46   49   52   56   61   65   71   78 
LCS_GDT     D   126_A     D   126_A     20   27   45      8   17   19   22   27   29   32   35   37   39   41   44   46   49   52   56   61   65   71   78 
LCS_GDT     V   127_A     V   127_A     20   27   45      8   17   19   22   27   29   32   35   37   39   41   44   46   49   52   56   61   65   71   78 
LCS_GDT     A   128_A     A   128_A     20   27   45     12   17   19   22   27   29   32   35   37   39   41   44   46   49   52   56   61   65   71   78 
LCS_GDT     R   129_A     R   129_A     20   27   45     12   17   19   22   27   29   32   35   37   39   41   44   46   49   52   56   61   65   71   78 
LCS_GDT     L   130_A     L   130_A     20   27   45     12   17   19   22   27   29   32   35   37   39   41   44   46   49   52   56   61   65   71   78 
LCS_GDT     A   131_A     A   131_A     20   27   45      9   17   19   22   27   29   32   35   37   39   41   44   46   49   52   56   61   65   71   78 
LCS_GDT     E   132_A     E   132_A     20   27   45     12   17   19   22   27   29   32   35   37   39   41   44   46   49   52   56   61   65   71   78 
LCS_GDT     A   133_A     A   133_A     20   27   45     12   17   19   22   27   29   32   35   37   39   41   44   46   49   52   56   61   65   71   78 
LCS_GDT     G   134_A     G   134_A     20   27   45     12   17   19   22   27   29   32   35   37   39   41   44   46   49   52   56   61   65   71   78 
LCS_GDT     E   135_A     E   135_A     20   27   45     12   17   19   22   27   29   32   35   37   39   41   44   46   49   52   56   61   65   71   78 
LCS_GDT     A   136_A     A   136_A     20   27   45     12   17   19   22   27   29   31   35   37   39   41   44   46   49   52   56   61   65   71   78 
LCS_GDT     A   137_A     A   137_A     20   27   45     12   17   19   22   27   29   32   35   37   39   41   44   46   49   52   56   61   65   71   78 
LCS_GDT     I   138_A     I   138_A     20   27   45     12   17   19   22   27   29   32   35   37   39   41   44   46   49   52   56   61   65   71   78 
LCS_GDT     E   139_A     E   139_A     20   27   45     12   17   19   22   26   29   30   33   36   39   41   44   46   49   52   56   61   65   71   78 
LCS_GDT     R   140_A     R   140_A     20   27   45      6   17   19   22   27   29   31   35   37   39   41   44   46   49   52   56   61   65   71   78 
LCS_GDT     G   141_A     G   141_A     20   27   45      4   16   19   22   27   29   32   35   37   39   41   44   46   49   52   56   61   65   71   78 
LCS_GDT     E   142_A     E   142_A     20   27   45      3    4   14   22   24   28   32   35   37   39   40   42   44   49   51   56   61   65   71   78 
LCS_GDT     G   143_A     G   143_A     19   27   45      8   12   16   19   20   26   31   32   36   39   40   41   41   44   50   54   58   61   65   74 
LCS_GDT     A   144_A     A   144_A     19   27   45      8   13   18   19   23   28   31   32   37   39   40   42   44   46   50   55   58   64   71   78 
LCS_GDT     S   145_A     S   145_A     19   27   45      8   13   18   22   24   28   31   35   37   39   40   42   44   46   50   56   61   64   71   78 
LCS_GDT     L   146_A     L   146_A     19   27   45      8   13   18   22   24   28   31   35   37   39   40   42   44   46   51   56   61   65   71   78 
LCS_GDT     G   147_A     G   147_A     19   27   45      8   13   18   19   23   28   31   35   37   39   40   42   46   49   52   56   61   65   71   78 
LCS_GDT     V   148_A     V   148_A     19   27   45      8   13   18   22   24   28   32   35   37   39   40   44   46   49   52   56   61   65   71   78 
LCS_GDT     H   149_A     H   149_A     19   27   45      8   13   18   20   24   28   32   35   37   39   40   42   46   49   52   55   61   65   71   78 
LCS_GDT     R   150_A     R   150_A     19   21   45      8   13   18   20   24   28   32   35   37   39   40   44   46   49   52   55   61   65   71   78 
LCS_GDT     E   151_A     E   151_A     19   21   45      8   13   18   21   27   29   32   35   37   39   41   44   46   49   52   55   61   65   71   78 
LCS_GDT     L   152_A     L   152_A     19   21   45      7   13   18   21   27   29   32   35   37   39   41   44   46   49   52   55   61   65   71   78 
LCS_GDT     R   153_A     R   153_A     19   21   45      7   13   18   21   27   29   32   35   37   39   41   44   46   49   52   55   61   65   71   78 
LCS_GDT     R   154_A     R   154_A     19   21   45      7   13   18   21   27   29   32   35   37   39   41   44   46   49   52   55   61   65   71   78 
LCS_GDT     I   155_A     I   155_A     19   21   45      7   13   18   21   27   29   32   35   37   39   41   44   46   49   52   55   61   65   71   78 
LCS_GDT     E   156_A     E   156_A     19   21   45      7   13   18   21   27   29   32   35   37   39   41   44   46   49   52   55   61   65   71   78 
LCS_GDT     A   157_A     A   157_A     19   21   45      7   13   18   21   27   29   32   35   37   39   41   44   46   49   52   55   61   65   71   78 
LCS_GDT     R   158_A     R   158_A     19   21   45      5   13   18   19   23   28   32   35   37   39   41   44   46   49   52   55   61   65   71   78 
LCS_GDT     R   159_A     R   159_A     19   21   45      5   11   18   19   22   28   31   35   37   39   41   44   46   49   52   55   61   65   71   78 
LCS_GDT     N   160_A     N   160_A     19   21   45      6   11   18   21   27   29   32   35   37   39   41   44   46   49   52   55   61   65   71   78 
LCS_GDT     S   161_A     S   161_A     19   21   45      3   13   18   19   23   28   32   35   37   39   41   44   46   49   52   55   61   65   71   78 
LCS_AVERAGE  LCS_A:  18.22  (  10.68   14.74   29.24 )

GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_AT     13     17     20     22     27     30     33     35     37     39     42     44     49     52     56     62     66     71     74     78 
GDT PERCENT_AT   8.61  11.26  13.25  14.57  17.88  19.87  21.85  23.18  24.50  25.83  27.81  29.14  32.45  34.44  37.09  41.06  43.71  47.02  49.01  51.66
GDT RMS_LOCAL    0.30   0.62   0.90   1.01   1.76   1.75   2.03   2.41   2.60   2.78   3.06   3.60   4.24   4.42   4.94   5.54   5.79   6.16   6.35   7.10
GDT RMS_ALL_AT  21.05  18.20  20.02  18.57  15.14  18.11  18.08  15.85  16.11  17.89  17.88  13.75  17.03  17.15  17.75  17.78  17.71  17.98  18.18  12.58

# Checking swapping
#   possible swapping detected:  E    14_A      E    14_A
#   possible swapping detected:  F    16_A      F    16_A
#   possible swapping detected:  E    22_A      E    22_A
#   possible swapping detected:  D    30_A      D    30_A
#   possible swapping detected:  F    36_A      F    36_A
#   possible swapping detected:  D    40_A      D    40_A
#   possible swapping detected:  D    45_A      D    45_A
#   possible swapping detected:  E    49_A      E    49_A
#   possible swapping detected:  E    57_A      E    57_A
#   possible swapping detected:  D    61_A      D    61_A
#   possible swapping detected:  E    71_A      E    71_A
#   possible swapping detected:  E    89_A      E    89_A
#   possible swapping detected:  E    96_A      E    96_A
#   possible swapping detected:  F   101_A      F   101_A
#   possible swapping detected:  F   105_A      F   105_A
#   possible swapping detected:  D   112_A      D   112_A
#   possible swapping detected:  E   118_A      E   118_A
#   possible swapping detected:  E   125_A      E   125_A
#   possible swapping detected:  D   126_A      D   126_A
#   possible swapping detected:  E   132_A      E   132_A
#   possible swapping detected:  E   135_A      E   135_A
#   possible swapping detected:  E   139_A      E   139_A
#   possible swapping detected:  E   142_A      E   142_A
#   possible swapping detected:  E   156_A      E   156_A

#      Molecule1      Molecule2  DISTANCE    Mis    MC     All    Dist_max   GDC_mc  GDC_all
LGA    Q    11_A      Q    11_A    13.238     0    0.463   1.184    18.571    0.357    0.159
LGA    A    12_A      A    12_A    12.485     0    0.398   0.384    15.188    0.000    0.000
LGA    V    13_A      V    13_A     9.517     0    0.257   1.205    12.005   10.000    5.714
LGA    E    14_A      E    14_A     3.466     0    0.174   0.545     5.992   41.190   37.989
LGA    D    15_A      D    15_A     7.988     0    0.037   1.171    12.034    9.048    4.524
LGA    F    16_A      F    16_A     6.411     0    0.079   1.362     7.035   20.000   27.143
LGA    L    17_A      L    17_A     2.737     0    0.083   0.131     7.379   36.429   38.214
LGA    R    18_A      R    18_A     8.913     0    0.077   1.038    16.049    5.000    1.948
LGA    V    19_A      V    19_A    12.769     0    0.081   1.108    15.412    0.000    0.000
LGA    H    20_A      H    20_A     9.257     0    0.063   0.339    12.372    0.476   13.095
LGA    S    21_A      S    21_A    13.421     0    0.072   0.574    17.815    0.000    0.000
LGA    E    22_A      E    22_A    18.713     0    0.043   0.864    21.870    0.000    0.000
LGA    L    23_A      L    23_A    18.715     0    0.467   1.113    21.260    0.000    0.000
LGA    V    24_A      V    24_A    17.852     0    0.271   0.335    21.117    0.000    0.000
LGA    H    25_A      H    25_A    24.944     0    0.054   1.093    31.828    0.000    0.000
LGA    R    26_A      R    26_A    28.280     0    0.081   1.551    30.038    0.000    0.000
LGA    L    27_A      L    27_A    25.632     0    0.104   1.190    27.665    0.000    0.000
LGA    A    28_A      A    28_A    26.227     0    0.127   0.125    29.856    0.000    0.000
LGA    G    29_A      G    29_A    33.203     0    0.340   0.340    35.462    0.000    0.000
LGA    D    30_A      D    30_A    31.889     0    0.187   0.938    32.826    0.000    0.000
LGA    P    31_A      P    31_A    29.379     0    0.653   1.070    32.179    0.000    0.000
LGA    P    32_A      P    32_A    23.301     0    0.021   0.692    27.117    0.000    0.000
LGA    D    33_A      D    33_A    20.838     0    0.611   1.411    23.705    0.000    0.000
LGA    E    34_A      E    34_A    14.893     0    0.433   0.907    17.203    0.000    0.000
LGA    L    35_A      L    35_A    11.087     0    0.101   1.208    12.595    0.119    0.179
LGA    F    36_A      F    36_A    12.468     0    0.069   1.496    14.053    0.000    0.173
LGA    Q    37_A      Q    37_A    14.208     0    0.055   0.659    20.021    0.000    0.000
LGA    R    38_A      R    38_A     9.806     0    0.037   1.170    11.194    0.357   10.087
LGA    L    39_A      L    39_A     9.259     0    0.048   1.429    11.259    0.476    5.833
LGA    D    40_A      D    40_A    14.349     0    0.059   0.565    19.053    0.000    0.000
LGA    R    41_A      R    41_A    14.137     0    0.048   1.470    14.473    0.000    0.000
LGA    F    42_A      F    42_A    11.245     0    0.036   1.278    13.223    0.000    4.805
LGA    V    43_A      V    43_A    14.034     0    0.066   0.140    16.630    0.000    0.000
LGA    T    44_A      T    44_A    18.614     0    0.086   1.046    21.979    0.000    0.000
LGA    D    45_A      D    45_A    17.653     0    0.043   0.138    19.129    0.000    0.000
LGA    A    46_A      A    46_A    16.831     0    0.057   0.056    19.518    0.000    0.000
LGA    I    47_A      I    47_A    20.759     0    0.125   0.160    24.078    0.000    0.000
LGA    I    48_A      I    48_A    23.678     0    0.027   0.086    25.538    0.000    0.000
LGA    E    49_A      E    49_A    23.038     0    0.131   0.838    24.472    0.000    0.000
LGA    G    50_A      G    50_A    23.933     0    0.130   0.130    24.812    0.000    0.000
LGA    N    51_A      N    51_A    26.156     0    0.057   0.261    30.174    0.000    0.000
LGA    P    52_A      P    52_A    25.967     0    0.039   0.385    27.389    0.000    0.000
LGA    E    53_A      E    53_A    30.032     0    0.169   1.195    36.199    0.000    0.000
LGA    R    54_A      R    54_A    28.568     0    0.386   0.845    33.426    0.000    0.000
LGA    R    55_A      R    55_A    24.406     0    0.076   0.968    27.579    0.000    0.000
LGA    D    56_A      D    56_A    28.245     0    0.079   1.051    33.006    0.000    0.000
LGA    E    57_A      E    57_A    27.987     0    0.034   0.931    31.575    0.000    0.000
LGA    I    58_A      I    58_A    21.663     0    0.039   0.083    24.080    0.000    0.000
LGA    K    59_A      K    59_A    21.620     0    0.081   0.708    25.347    0.000    0.000
LGA    A    60_A      A    60_A    25.263     0    0.139   0.142    27.797    0.000    0.000
LGA    D    61_A      D    61_A    21.545     0    0.061   1.052    22.948    0.000    0.000
LGA    L    62_A      L    62_A    17.517     0    0.037   0.924    18.914    0.000    0.000
LGA    A    63_A      A    63_A    21.396     0    0.062   0.056    23.635    0.000    0.000
LGA    R    64_A      R    64_A    21.474     0    0.056   1.332    27.953    0.000    0.000
LGA    A    65_A      A    65_A    15.986     0    0.084   0.086    17.930    0.000    0.000
LGA    A    66_A      A    66_A    16.118     0    0.118   0.127    17.224    0.000    0.000
LGA    R    67_A      R    67_A    19.773     0    0.068   1.367    23.739    0.000    0.000
LGA    V    68_A      V    68_A    16.324     0    0.038   0.058    18.056    0.000    0.000
LGA    F    69_A      F    69_A    12.640     0    0.025   0.610    13.815    0.000    0.173
LGA    G    70_A      G    70_A    16.879     0    0.057   0.057    17.684    0.000    0.000
LGA    E    71_A      E    71_A    18.308     0    0.058   0.817    21.487    0.000    0.000
LGA    A    72_A      A    72_A    13.135     0    0.023   0.024    14.815    0.000    0.000
LGA    L    73_A      L    73_A    14.766     0    0.091   1.395    16.604    0.000    0.000
LGA    E    74_A      E    74_A    18.685     0    0.704   0.906    22.912    0.000    0.000
LGA    R    75_A      R    75_A    17.188     0    0.698   1.178    19.302    0.000    0.000
LGA    D    76_A      D    76_A    22.046     0    0.548   1.317    23.485    0.000    0.000
LGA    I    77_A      I    77_A    21.144     0    0.464   0.399    23.498    0.000    0.000
LGA    T    78_A      T    78_A    24.039     0    0.710   0.638    27.632    0.000    0.000
LGA    T    79_A      T    79_A    21.865     0    0.205   1.154    22.868    0.000    0.000
LGA    P    80_A      P    80_A    18.799     0    0.051   0.143    22.946    0.000    0.000
LGA    E    81_A      E    81_A    16.638     0    0.063   1.305    20.525    0.000    0.000
LGA    D    82_A      D    82_A    13.021     0    0.082   1.192    16.506    0.000    0.000
LGA    F    83_A      F    83_A    11.337     0    0.091   1.662    12.758    0.357    0.130
LGA    N    84_A      N    84_A    11.807     0    0.067   0.083    17.470    0.000    0.000
LGA    A    85_A      A    85_A     9.398     0    0.075   0.076    10.219    1.190    1.238
LGA    F    86_A      F    86_A     8.695     0    0.070   1.357    10.471    2.262    4.242
LGA    L    87_A      L    87_A    10.402     0    0.046   1.383    13.390    0.357    0.179
LGA    R    88_A      R    88_A    14.370     0    0.058   0.582    17.000    0.000    0.000
LGA    E    89_A      E    89_A    14.473     0    0.071   0.096    17.298    0.000    0.000
LGA    L    90_A      L    90_A    15.516     0    0.062   1.326    18.931    0.000    0.000
LGA    G    91_A      G    91_A    19.437     0    0.610   0.610    19.923    0.000    0.000
LGA    P    92_A      P    92_A    21.400     0    0.085   0.496    22.393    0.000    0.000
LGA    E    93_A      E    93_A    21.355     0    0.423   0.779    28.840    0.000    0.000
LGA    A    94_A      A    94_A    16.679     0    0.227   0.225    18.699    0.000    0.000
LGA    V    95_A      V    95_A    16.222     0    0.091   0.944    17.773    0.000    0.000
LGA    E    96_A      E    96_A    20.407     0    0.041   0.942    27.994    0.000    0.000
LGA    L    97_A      L    97_A    19.214     0    0.055   0.907    21.276    0.000    0.000
LGA    V    98_A      V    98_A    14.114     0    0.036   0.084    15.600    0.000    0.000
LGA    S    99_A      S    99_A    16.652     0    0.086   0.084    19.999    0.000    0.000
LGA    T   100_A      T   100_A    19.947     0    0.090   0.101    22.982    0.000    0.000
LGA    F   101_A      F   101_A    16.318     0    0.019   1.241    17.307    0.000    0.000
LGA    T   102_A      T   102_A    13.775     0    0.052   0.878    15.384    0.000    0.000
LGA    Q   103_A      Q   103_A    18.383     0    0.044   0.165    22.521    0.000    0.000
LGA    Q   104_A      Q   104_A    18.756     0    0.077   0.943    24.734    0.000    0.000
LGA    F   105_A      F   105_A    13.754     0    0.087   1.328    15.172    0.000    0.043
LGA    V   106_A      V   106_A    14.765     0    0.020   0.026    17.681    0.000    0.000
LGA    D   107_A      D   107_A    19.174     0    0.053   1.182    23.131    0.000    0.000
LGA    V   108_A      V   108_A    16.722     0    0.032   0.134    18.294    0.000    0.000
LGA    I   109_A      I   109_A    12.310     0    0.027   0.093    13.570    0.000    0.060
LGA    R   110_A      R   110_A    17.050     0    0.071   1.258    22.779    0.000    0.000
LGA    G   111_A      G   111_A    19.693     0    0.159   0.159    19.693    0.000    0.000
LGA    D   112_A      D   112_A    14.721     0    0.533   0.618    16.041    0.000    0.000
LGA    P   113_A      P   113_A    12.877     0    0.048   0.648    13.212    0.000    0.000
LGA    Q   114_A      Q   114_A    12.857     0    0.056   0.702    16.499    0.000    0.000
LGA    A   115_A      A   115_A    15.349     0    0.069   0.066    16.558    0.000    0.000
LGA    V   116_A      V   116_A    15.895     0    0.082   0.109    20.439    0.000    0.000
LGA    A   117_A      A   117_A    11.124     0    0.043   0.043    12.708    0.000    0.000
LGA    E   118_A      E   118_A    14.674     0    0.157   0.909    19.280    0.000    0.000
LGA    H   119_A      H   119_A    16.032     0    0.497   1.152    18.883    0.000    0.000
LGA    L   120_A      L   120_A    13.597     0    0.569   1.430    16.161    0.000    0.000
LGA    N   121_A      N   121_A    13.734     0    0.481   0.707    18.111    0.000    0.000
LGA    I   122_A      I   122_A     8.835     0    0.572   1.427    12.295    5.833    3.452
LGA    S   123_A      S   123_A     2.232     0    0.570   0.947     4.294   59.881   67.381
LGA    L   124_A      L   124_A     1.612     0    0.090   0.958     4.776   77.381   64.226
LGA    E   125_A      E   125_A     1.998     0    0.021   0.441     4.702   70.833   58.783
LGA    D   126_A      D   126_A     2.122     0    0.082   0.184     3.474   68.810   60.298
LGA    V   127_A      V   127_A     1.170     0    0.069   0.071     1.966   85.952   82.789
LGA    A   128_A      A   128_A     0.814     0    0.035   0.039     1.415   88.333   86.952
LGA    R   129_A      R   129_A     2.367     0    0.013   1.639     6.061   68.810   49.870
LGA    L   130_A      L   130_A     2.005     0    0.073   1.125     3.316   75.119   66.190
LGA    A   131_A      A   131_A     1.076     0    0.044   0.047     1.640   83.810   81.619
LGA    E   132_A      E   132_A     1.965     0    0.033   0.246     4.529   72.976   57.566
LGA    A   133_A      A   133_A     1.753     0    0.060   0.055     2.209   77.143   74.667
LGA    G   134_A      G   134_A     0.803     0    0.047   0.047     1.564   86.190   86.190
LGA    E   135_A      E   135_A     3.017     0    0.055   0.952     5.534   53.690   42.275
LGA    A   136_A      A   136_A     3.319     0    0.027   0.028     3.835   53.571   51.524
LGA    A   137_A      A   137_A     1.035     0    0.057   0.056     1.556   83.810   83.333
LGA    I   138_A      I   138_A     2.542     0    0.021   0.667     5.955   57.500   45.536
LGA    E   139_A      E   139_A     4.533     0    0.071   0.858     6.638   35.833   26.508
LGA    R   140_A      R   140_A     3.472     0    0.228   0.970     5.581   51.786   40.736
LGA    G   141_A      G   141_A     1.216     0    0.086   0.086     1.560   83.810   83.810
LGA    E   142_A      E   142_A     3.798     0    0.599   0.538     8.127   37.857   25.397
LGA    G   143_A      G   143_A     7.263     0    0.331   0.331     7.263   18.929   18.929
LGA    A   144_A      A   144_A     6.233     0    0.083   0.102     7.128   20.000   18.667
LGA    S   145_A      S   145_A     5.622     0    0.038   0.043     6.534   25.119   21.825
LGA    L   146_A      L   146_A     5.484     0    0.048   1.107     5.796   26.310   28.333
LGA    G   147_A      G   147_A     4.585     0    0.053   0.053     5.078   37.738   37.738
LGA    V   148_A      V   148_A     3.650     0    0.038   0.106     4.391   46.905   43.605
LGA    H   149_A      H   149_A     3.725     0    0.047   0.398     6.164   46.667   34.143
LGA    R   150_A      R   150_A     3.407     0    0.064   1.484     7.774   53.810   29.654
LGA    E   151_A      E   151_A     1.297     0    0.071   0.737     2.526   84.167   78.995
LGA    L   152_A      L   152_A     1.168     0    0.085   1.370     4.620   85.952   70.298
LGA    R   153_A      R   153_A     0.820     0    0.024   1.254     3.617   90.476   70.476
LGA    R   154_A      R   154_A     0.858     0    0.050   1.159     1.971   88.214   83.160
LGA    I   155_A      I   155_A     1.539     0    0.022   0.114     2.059   72.976   71.905
LGA    E   156_A      E   156_A     1.664     0    0.042   0.269     2.737   72.976   68.466
LGA    A   157_A      A   157_A     1.238     0    0.053   0.051     2.465   73.095   74.762
LGA    R   158_A      R   158_A     3.312     0    0.079   1.407     4.206   48.810   58.009
LGA    R   159_A      R   159_A     4.056     0    0.096   1.198    10.966   41.905   21.558
LGA    N   160_A      N   160_A     2.105     0    0.106   0.374     4.103   60.952   57.619
LGA    S   161_A      S   161_A     3.192     0    0.610   0.776     5.754   45.833   40.317

# RMSD_GDC results:       CA      MC common percent     ALL common percent   GDC_mc  GDC_all
NUMBER_OF_ATOMS_AA:      151     604    604  100.00    1194   1194  100.00               151
SUMMARY(RMSD_GDC):    12.226         12.119                 12.728           16.870   15.387

#CA            N1   N2   DIST      N    RMSD    GDT_TS    LGA_S3     LGA_Q 
SUMMARY(GDT)  164  151    4.0     35    2.41    22.517    20.520     1.394

LGA_LOCAL      RMSD:   2.412  Number of atoms:   35  under DIST:   4.00
LGA_ASGN_ATOMS RMSD:  15.848  Number of assigned atoms:  151 
Std_ASGN_ATOMS RMSD:  12.226  Standard rmsd on all 151 assigned CA atoms 

Unitary ROTATION matrix and the SHIFT vector superimpose molecules  (1=>2)
  X_new =  -0.601593 * X  +   0.067240 * Y  +  -0.795967 * Z  + -17.057655
  Y_new =   0.338149 * X  +   0.924202 * Y  +  -0.177501 * Z  + -26.687832
  Z_new =   0.723699 * X  +  -0.375939 * Y  +  -0.578731 * Z  + -40.344246 

Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ:
           Phi     Theta       Psi   [DEG:       Phi     Theta       Psi ]
XYZ:  2.629516 -0.809148 -2.565505   [DEG:  150.6602  -46.3608 -146.9926 ]
ZXZ: -1.351387  2.187968  2.049897   [DEG:  -77.4287  125.3613  117.4504 ]
 
# END of job
