
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  ------------ 10/2009               #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

!!!   License for LGA program has expired  !!!
#   For updated version of the LGA program   #
# please contact Adam Zemla:  adamz@llnl.gov #

# Molecule1: number of CA atoms  164 ( 1284),  selected  151 , name one
# Molecule2: number of CA atoms  151 ( 1194),  selected  151 , name two
# PARAMETERS: input.pdb  -ie  -3  -d:4  -sda  -swap  -ch1:A  -ch2:A  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    48      19_A - 66_A        4.99    21.29
  LONGEST_CONTINUOUS_SEGMENT:    48      20_A - 67_A        4.96    20.89
  LONGEST_CONTINUOUS_SEGMENT:    48      22_A - 69_A        4.91    20.52
  LONGEST_CONTINUOUS_SEGMENT:    48      23_A - 70_A        4.87    20.27
  LCS_AVERAGE:     24.13

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    23      54_A - 76_A        1.68    16.19
  LONGEST_CONTINUOUS_SEGMENT:    23      55_A - 77_A        1.99    15.70
  LCS_AVERAGE:     12.71

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    20      91_A - 110_A       0.97    25.10
  LCS_AVERAGE:      9.39

LCS_GDT    MOLECULE-1    MOLECULE-2     LCS_DETAILS     GDT_DETAILS                                                    TOTAL NUMBER OF RESIDUE PAIRS:  151
LCS_GDT     RESIDUE       RESIDUE       SEGMENT_SIZE    GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair
LCS_GDT   NAME NUMBER   NAME NUMBER    1.0  2.0  5.0    0.5  1.0  1.5  2.0  2.5  3.0  3.5  4.0  4.5  5.0  5.5  6.0  6.5  7.0  7.5  8.0  8.5  9.0  9.5 10.0
LCS_GDT     Q    11_A     Q    11_A      3   19   32      3    3    4    9   13   25   30   34   39   42   46   50   53   56   59   61   66   68   71   73 
LCS_GDT     A    12_A     A    12_A      4   19   32      3    5   11   17   21   25   30   34   39   42   46   50   53   56   59   61   66   68   71   73 
LCS_GDT     V    13_A     V    13_A      8   19   32      4    9   14   17   21   25   30   34   39   42   46   50   53   56   59   61   66   68   80   82 
LCS_GDT     E    14_A     E    14_A      8   19   32      6    9   14   17   20   24   30   34   39   42   46   50   53   56   59   61   66   68   71   73 
LCS_GDT     D    15_A     D    15_A      8   19   32      6   10   14   16   17   24   30   34   39   42   46   50   53   56   59   61   66   68   71   73 
LCS_GDT     F    16_A     F    16_A      8   19   32      6    9   13   16   21   25   30   34   39   42   46   50   53   56   59   64   69   74   80   82 
LCS_GDT     L    17_A     L    17_A      8   19   32      6    9   12   16   17   22   30   34   39   42   46   50   53   56   59   61   69   74   80   82 
LCS_GDT     R    18_A     R    18_A     11   19   32      6    9   14   17   20   24   30   34   39   42   46   50   53   56   59   61   66   68   71   73 
LCS_GDT     V    19_A     V    19_A     11   19   48      7   10   14   16   20   25   30   34   39   42   46   50   53   56   59   61   66   73   80   82 
LCS_GDT     H    20_A     H    20_A     11   19   48      7   10   14   16   21   25   30   34   39   42   46   50   53   56   59   64   69   74   80   82 
LCS_GDT     S    21_A     S    21_A     11   19   48      7   10   14   16   20   25   30   34   39   42   46   50   53   56   59   61   66   71   80   82 
LCS_GDT     E    22_A     E    22_A     11   19   48      4   10   14   16   17   25   30   34   39   42   46   50   53   56   59   61   66   73   80   82 
LCS_GDT     L    23_A     L    23_A     11   19   48      7   10   14   16   18   25   30   34   39   42   46   50   53   56   59   64   69   74   80   82 
LCS_GDT     V    24_A     V    24_A     11   19   48      7   10   14   16   21   25   30   34   39   42   46   50   53   56   59   64   69   74   80   82 
LCS_GDT     H    25_A     H    25_A     11   19   48      7   10   14   16   21   25   30   34   39   42   46   50   53   56   59   64   69   74   80   82 
LCS_GDT     R    26_A     R    26_A     11   19   48      7   10   14   16   21   25   30   34   39   42   46   50   53   56   59   64   69   74   80   82 
LCS_GDT     L    27_A     L    27_A     11   19   48      4   10   14   16   17   21   25   34   39   42   46   50   53   56   59   64   69   74   80   82 
LCS_GDT     A    28_A     A    28_A     11   19   48      7   10   14   16   17   20   25   34   37   42   46   49   53   56   59   64   69   74   80   82 
LCS_GDT     G    29_A     G    29_A     11   19   48      4    6    8   14   17   20   23   34   37   39   44   48   52   55   59   64   69   74   80   82 
LCS_GDT     D    30_A     D    30_A      4    6   48      4    5    7    7   10   16   20   23   29   37   42   46   50   54   59   64   69   74   80   82 
LCS_GDT     P    31_A     P    31_A      4   20   48      4    4    5    9   14   18   20   23   31   37   42   46   50   54   59   64   69   74   80   82 
LCS_GDT     P    32_A     P    32_A      4   20   48      4    4    7    7    9   15   20   23   31   37   42   46   50   54   59   64   69   74   80   82 
LCS_GDT     D    33_A     D    33_A     17   20   48     12   16   16   16   17   18   20   23   31   37   42   46   50   54   59   64   69   74   80   82 
LCS_GDT     E    34_A     E    34_A     17   20   48     12   16   16   16   17   18   20   23   31   37   42   46   50   54   59   64   69   74   80   82 
LCS_GDT     L    35_A     L    35_A     17   20   48     11   16   16   16   17   18   20   23   31   35   42   46   50   54   59   64   69   74   80   82 
LCS_GDT     F    36_A     F    36_A     17   20   48     12   16   16   16   17   18   20   23   31   37   42   46   50   54   59   64   69   74   80   82 
LCS_GDT     Q    37_A     Q    37_A     17   20   48     12   16   16   16   17   18   20   23   31   37   42   46   50   54   59   64   69   74   80   82 
LCS_GDT     R    38_A     R    38_A     17   20   48     12   16   16   16   17   18   20   23   31   37   42   46   50   54   59   64   69   74   80   82 
LCS_GDT     L    39_A     L    39_A     17   20   48     12   16   16   16   17   18   20   23   31   37   42   46   50   54   59   64   69   74   80   82 
LCS_GDT     D    40_A     D    40_A     17   20   48     12   16   16   16   17   18   20   23   31   37   42   46   50   54   59   64   69   74   80   82 
LCS_GDT     R    41_A     R    41_A     17   20   48     12   16   16   16   17   18   20   23   31   37   42   46   50   54   59   64   69   74   80   82 
LCS_GDT     F    42_A     F    42_A     17   20   48     12   16   16   16   17   18   20   23   31   37   42   46   50   54   59   64   69   74   80   82 
LCS_GDT     V    43_A     V    43_A     17   20   48     12   16   16   16   17   18   20   23   31   37   42   46   50   54   59   64   69   74   80   82 
LCS_GDT     T    44_A     T    44_A     17   20   48     12   16   16   16   17   18   20   23   27   37   42   46   50   54   59   64   69   74   80   82 
LCS_GDT     D    45_A     D    45_A     17   20   48     12   16   16   16   17   18   20   23   31   37   42   46   50   54   59   64   69   74   80   82 
LCS_GDT     A    46_A     A    46_A     17   20   48     12   16   16   16   17   18   20   23   31   37   42   46   50   54   59   64   69   74   80   82 
LCS_GDT     I    47_A     I    47_A     17   20   48      8   16   16   16   17   18   20   23   26   28   34   44   50   54   59   64   69   74   79   82 
LCS_GDT     I    48_A     I    48_A     17   20   48      8   16   16   16   17   18   20   23   31   37   42   46   50   54   59   64   69   74   80   82 
LCS_GDT     E    49_A     E    49_A     17   20   48      3    4    7   11   17   18   20   23   31   37   42   46   50   54   59   64   69   74   80   82 
LCS_GDT     G    50_A     G    50_A      3   20   48      3    3    3    5   13   17   20   23   31   37   42   46   50   54   59   64   69   74   80   82 
LCS_GDT     N    51_A     N    51_A      3   19   48      3    3    3    5    6   13   19   23   31   37   42   46   50   54   59   62   69   74   79   82 
LCS_GDT     P    52_A     P    52_A      4   16   48      3    4    7   11   15   18   23   26   31   37   42   46   50   54   59   64   69   74   80   82 
LCS_GDT     E    53_A     E    53_A      4   18   48      3    4    4    5   10   14   18   26   31   37   42   46   50   54   59   64   69   74   80   82 
LCS_GDT     R    54_A     R    54_A     11   23   48      7    9   12   18   21   23   27   27   31   37   42   48   53   55   59   64   69   74   80   82 
LCS_GDT     R    55_A     R    55_A     13   23   48      7    9   13   19   22   24   27   27   34   37   42   48   53   56   59   64   69   74   80   82 
LCS_GDT     D    56_A     D    56_A     13   23   48      7   10   15   19   22   24   27   31   34   40   46   50   53   56   59   64   69   74   80   82 
LCS_GDT     E    57_A     E    57_A     13   23   48      7   10   15   20   22   24   27   33   37   42   46   50   53   56   59   64   69   74   80   82 
LCS_GDT     I    58_A     I    58_A     13   23   48      7   10   15   20   22   24   27   31   36   41   46   50   53   56   59   64   69   74   80   82 
LCS_GDT     K    59_A     K    59_A     16   23   48      7   10   16   20   22   24   27   33   37   41   46   50   53   56   59   64   69   74   80   82 
LCS_GDT     A    60_A     A    60_A     17   23   48      7    9   17   20   22   24   28   34   39   42   46   50   53   56   59   64   69   74   80   82 
LCS_GDT     D    61_A     D    61_A     17   23   48      4   12   17   20   22   24   30   34   39   42   46   50   53   56   59   64   69   74   80   82 
LCS_GDT     L    62_A     L    62_A     17   23   48      4   10   17   20   22   24   28   33   38   42   46   50   53   56   59   64   69   74   80   82 
LCS_GDT     A    63_A     A    63_A     17   23   48      9   13   17   20   22   24   30   34   39   42   46   50   53   56   59   64   69   74   80   82 
LCS_GDT     R    64_A     R    64_A     17   23   48      8   13   17   20   22   25   30   34   39   42   46   50   53   56   59   64   69   74   80   82 
LCS_GDT     A    65_A     A    65_A     17   23   48      6   13   17   20   22   25   30   34   39   42   46   50   53   56   59   64   69   74   80   82 
LCS_GDT     A    66_A     A    66_A     17   23   48      9   13   17   20   22   25   30   34   39   42   46   50   53   56   59   64   69   74   80   82 
LCS_GDT     R    67_A     R    67_A     17   23   48      9   13   17   20   22   25   30   34   39   42   46   50   53   56   59   64   69   74   80   82 
LCS_GDT     V    68_A     V    68_A     17   23   48      9   13   17   20   22   25   30   34   39   42   46   50   53   56   59   64   69   74   80   82 
LCS_GDT     F    69_A     F    69_A     17   23   48      9   13   17   20   22   25   30   34   39   42   46   50   53   56   59   64   69   74   80   82 
LCS_GDT     G    70_A     G    70_A     17   23   48      9   13   17   20   22   25   30   34   39   42   46   50   53   56   59   64   69   74   80   82 
LCS_GDT     E    71_A     E    71_A     17   23   46      9   13   17   20   22   25   30   34   39   42   46   50   53   56   59   64   69   74   80   82 
LCS_GDT     A    72_A     A    72_A     17   23   44      9   13   17   20   22   25   30   34   39   42   46   50   53   56   59   64   69   74   80   82 
LCS_GDT     L    73_A     L    73_A     17   23   37      8   13   17   20   22   25   30   34   39   42   46   50   53   56   59   64   69   74   80   82 
LCS_GDT     E    74_A     E    74_A     17   23   37      9   13   17   20   22   25   30   34   39   42   46   50   53   56   59   61   66   74   80   82 
LCS_GDT     R    75_A     R    75_A     17   23   37      8   13   17   20   22   25   30   34   37   42   46   50   53   56   59   61   67   74   80   82 
LCS_GDT     D    76_A     D    76_A     17   23   37      3    4   17   20   22   23   27   34   36   38   44   48   52   56   59   64   69   74   80   82 
LCS_GDT     I    77_A     I    77_A      4   23   37      3    5    6   12   21   25   30   34   39   42   46   50   53   56   59   64   69   74   80   82 
LCS_GDT     T    78_A     T    78_A      4   21   37      3    8   11   16   21   25   30   34   39   42   46   50   53   56   59   64   69   74   80   82 
LCS_GDT     T    79_A     T    79_A      4   21   36      3    8   11   16   21   25   30   34   39   42   46   50   53   56   59   64   69   74   80   82 
LCS_GDT     P    80_A     P    80_A     11   13   31      5    8   11   12   15   18   20   24   28   34   36   40   47   52   57   61   66   68   71   73 
LCS_GDT     E    81_A     E    81_A     11   13   31      5    8   11   12   12   13   14   19   25   29   35   38   41   42   46   52   55   61   73   80 
LCS_GDT     D    82_A     D    82_A     11   13   31      5    8   11   12   12   13   16   16   20   25   27   31   34   43   57   64   69   74   80   82 
LCS_GDT     F    83_A     F    83_A     11   13   31      5    9   11   12   12   13   16   16   18   25   27   32   38   43   57   64   69   74   80   82 
LCS_GDT     N    84_A     N    84_A     11   13   31      8    9   11   12   12   13   14   17   23   29   32   38   41   42   47   64   69   74   80   82 
LCS_GDT     A    85_A     A    85_A     11   13   28      8    9   11   12   12   13   14   15   20   25   27   36   48   53   59   64   69   74   80   82 
LCS_GDT     F    86_A     F    86_A     11   13   28      8    9   11   12   12   13   14   15   20   25   29   34   50   53   59   64   69   74   80   82 
LCS_GDT     L    87_A     L    87_A     11   13   28      8    9   11   12   12   13   14   16   20   27   32   35   50   53   59   64   69   74   80   82 
LCS_GDT     R    88_A     R    88_A     11   13   28      8    9   11   12   12   17   22   26   29   30   33   37   43   48   55   63   69   73   79   81 
LCS_GDT     E    89_A     E    89_A     11   13   28      8    9   11   12   12   13   14   20   24   26   29   33   37   47   52   59   67   73   79   81 
LCS_GDT     L    90_A     L    90_A     11   22   28      8    9   11   14   15   18   22   22   28   30   32   37   43   49   59   64   69   74   80   82 
LCS_GDT     G    91_A     G    91_A     20   22   28      8   15   19   21   21   21   24   26   29   30   33   37   42   48   52   62   69   73   79   81 
LCS_GDT     P    92_A     P    92_A     20   22   28      6   12   19   21   21   21   23   25   27   30   32   34   42   48   52   61   67   73   79   81 
LCS_GDT     E    93_A     E    93_A     20   22   28      6   12   18   21   21   21   23   25   28   30   32   34   36   42   51   59   69   73   79   81 
LCS_GDT     A    94_A     A    94_A     20   22   28      6   14   19   21   21   21   24   26   29   30   38   45   50   54   59   64   69   74   80   82 
LCS_GDT     V    95_A     V    95_A     20   22   28      6   15   19   21   21   21   24   26   29   31   38   45   50   54   59   64   69   74   80   82 
LCS_GDT     E    96_A     E    96_A     20   22   28      6   15   19   21   21   21   24   26   29   30   38   45   50   54   59   64   69   74   80   82 
LCS_GDT     L    97_A     L    97_A     20   22   28      6   15   19   21   21   21   24   26   29   36   42   46   50   54   59   64   69   74   80   82 
LCS_GDT     V    98_A     V    98_A     20   22   28      6   15   19   21   21   22   27   27   31   37   42   46   50   54   59   64   69   74   80   82 
LCS_GDT     S    99_A     S    99_A     20   22   28      6   15   19   21   21   21   24   26   31   37   42   46   50   54   59   64   69   74   80   82 
LCS_GDT     T   100_A     T   100_A     20   22   28      6   15   19   21   21   21   24   26   29   30   36   45   50   54   59   64   69   74   80   82 
LCS_GDT     F   101_A     F   101_A     20   22   28      6   15   19   21   21   24   27   27   30   32   36   39   43   52   59   64   69   74   80   82 
LCS_GDT     T   102_A     T   102_A     20   22   28      6   15   19   21   21   22   27   27   30   32   37   40   47   54   59   64   69   74   80   82 
LCS_GDT     Q   103_A     Q   103_A     20   22   28      6   15   19   21   21   24   27   27   30   32   34   38   48   54   59   64   69   74   80   82 
LCS_GDT     Q   104_A     Q   104_A     20   22   28      6   15   19   21   21   24   27   27   30   32   34   37   41   43   50   58   67   74   80   82 
LCS_GDT     F   105_A     F   105_A     20   22   28      6   15   19   21   21   21   24   26   30   32   34   37   40   43   47   51   55   61   68   76 
LCS_GDT     V   106_A     V   106_A     20   22   28      6   15   19   21   21   21   24   26   30   32   34   37   39   42   47   51   55   65   72   80 
LCS_GDT     D   107_A     D   107_A     20   22   28      6   15   19   21   21   24   27   27   30   32   34   37   40   43   48   56   65   73   79   82 
LCS_GDT     V   108_A     V   108_A     20   22   28      5   15   19   21   21   21   24   26   29   32   34   37   40   43   47   51   55   61   65   72 
LCS_GDT     I   109_A     I   109_A     20   22   28      4   14   19   21   21   21   24   26   29   30   32   34   39   41   44   48   53   54   62   65 
LCS_GDT     R   110_A     R   110_A     20   22   28      4   13   19   21   21   21   24   26   30   32   34   37   40   43   47   51   54   61   65   72 
LCS_GDT     G   111_A     G   111_A     18   22   28      3   12   18   21   21   21   23   26   29   32   34   37   40   43   47   51   55   61   65   71 
LCS_GDT     D   112_A     D   112_A     10   22   28      4    8   10   10   11   13   18   23   27   29   33   36   42   44   46   51   55   59   63   65 
LCS_GDT     P   113_A     P   113_A     10   11   28      4    8   10   10   11   12   13   17   22   23   29   31   38   42   45   47   53   55   62   65 
LCS_GDT     Q   114_A     Q   114_A     10   11   27      6    8   10   17   20   21   23   23   24   29   35   40   43   45   46   53   61   66   71   73 
LCS_GDT     A   115_A     A   115_A     10   11   27      6    8   10   10   11   21   23   23   24   29   33   41   47   54   57   61   66   68   71   73 
LCS_GDT     V   116_A     V   116_A     10   11   27      6    8   10   10   11   12   13   16   19   20   23   28   39   45   45   54   60   61   65   68 
LCS_GDT     A   117_A     A   117_A     10   11   25      6    8   10   10   11   12   13   16   27   31   34   37   44   48   50   54   64   68   71   73 
LCS_GDT     E   118_A     E   118_A     10   11   25      6    8   10   10   13   17   22   27   34   37   44   48   53   56   59   61   66   68   71   73 
LCS_GDT     H   119_A     H   119_A     10   11   25      6    8   10   10   11   12   18   21   31   34   41   41   44   56   59   61   66   68   71   73 
LCS_GDT     L   120_A     L   120_A     10   11   25      4    7   10   10   11   12   13   16   19   30   35   37   43   45   45   51   53   55   62   67 
LCS_GDT     N   121_A     N   121_A     10   11   26      4    5    8   10   11   11   15   20   24   30   41   41   43   48   57   61   64   68   70   73 
LCS_GDT     I   122_A     I   122_A      5   20   28      4    5    5    7    7   12   19   21   24   27   29   33   37   48   50   61   66   68   71   73 
LCS_GDT     S   123_A     S   123_A     19   20   30      4   11   18   19   19   19   20   21   22   25   28   33   37   40   53   61   66   68   71   73 
LCS_GDT     L   124_A     L   124_A     19   20   30      6   16   18   19   19   19   20   21   22   27   29   33   37   46   53   61   66   68   71   73 
LCS_GDT     E   125_A     E   125_A     19   20   30      4   16   18   19   19   19   20   21   24   28   34   48   53   56   59   61   66   68   71   73 
LCS_GDT     D   126_A     D   126_A     19   20   30      6   16   18   19   19   19   20   21   31   38   46   50   53   56   59   61   66   68   71   73 
LCS_GDT     V   127_A     V   127_A     19   20   30      5   16   18   19   19   19   20   21   24   37   40   48   53   56   59   61   66   68   71   73 
LCS_GDT     A   128_A     A   128_A     19   20   30      8   16   18   19   19   19   20   21   29   37   45   50   53   56   59   61   66   68   71   73 
LCS_GDT     R   129_A     R   129_A     19   20   30      8   16   18   19   19   19   27   33   38   42   46   50   53   56   59   61   66   68   71   73 
LCS_GDT     L   130_A     L   130_A     19   20   30      8   16   18   19   19   21   28   34   39   42   46   50   53   56   59   61   66   68   71   73 
LCS_GDT     A   131_A     A   131_A     19   20   31      8   16   18   19   19   20   25   34   38   42   46   50   53   56   59   61   66   68   71   73 
LCS_GDT     E   132_A     E   132_A     19   20   31      8   16   18   19   19   20   28   34   39   42   46   50   53   56   59   61   66   68   71   73 
LCS_GDT     A   133_A     A   133_A     19   20   31      8   16   18   19   19   23   28   34   39   42   46   50   53   56   59   61   66   68   71   73 
LCS_GDT     G   134_A     G   134_A     19   20   31      8   16   18   19   19   21   26   34   39   42   46   50   53   56   59   61   66   68   71   73 
LCS_GDT     E   135_A     E   135_A     19   20   31      8   16   18   19   19   21   25   34   39   42   46   50   53   56   59   61   66   68   71   73 
LCS_GDT     A   136_A     A   136_A     19   20   31      8   16   18   19   19   20   28   34   39   42   46   50   53   56   59   61   66   68   71   73 
LCS_GDT     A   137_A     A   137_A     19   20   31      8   16   18   19   19   19   20   23   34   39   46   49   52   56   59   60   66   68   71   73 
LCS_GDT     I   138_A     I   138_A     19   20   31      8   16   18   19   19   19   20   23   29   37   44   45   48   51   57   59   63   66   70   73 
LCS_GDT     E   139_A     E   139_A     19   20   31      6   16   18   19   19   19   20   32   37   42   46   49   52   56   59   61   66   68   71   73 
LCS_GDT     R   140_A     R   140_A     19   20   31      7   16   18   19   19   19   20   21   23   37   39   42   45   50   55   59   63   68   71   73 
LCS_GDT     G   141_A     G   141_A     19   20   31      4   10   14   19   19   19   20   21   22   25   29   33   42   44   47   49   50   53   66   68 
LCS_GDT     E   142_A     E   142_A      3   20   31      0    3    4    6    6   11   17   20   20   24   28   32   34   35   36   40   50   50   56   65 
LCS_GDT     G   143_A     G   143_A      4    5   31      0    4    4    5    6   12   15   17   20   22   27   32   34   35   36   37   38   39   42   45 
LCS_GDT     A   144_A     A   144_A      4   18   31      3    4    4   11   12   17   18   18   19   20   22   25   27   29   32   34   36   38   41   45 
LCS_GDT     S   145_A     S   145_A     15   18   31      3    8   13   15   17   17   18   18   19   20   23   26   27   29   36   36   37   39   42   45 
LCS_GDT     L   146_A     L   146_A     15   18   31      3   11   13   15   17   17   18   18   20   23   27   32   34   35   36   37   38   39   52   55 
LCS_GDT     G   147_A     G   147_A     15   18   31      4    4   11   15   17   17   18   18   20   22   25   27   28   31   36   41   47   51   56   62 
LCS_GDT     V   148_A     V   148_A     15   18   31      4   11   13   15   17   17   18   19   20   22   25   28   32   35   36   37   43   48   52   62 
LCS_GDT     H   149_A     H   149_A     15   18   31      4   11   13   15   17   17   18   18   20   24   28   32   34   35   36   37   38   48   52   55 
LCS_GDT     R   150_A     R   150_A     15   18   31      4   11   13   15   17   17   18   18   20   24   28   32   34   35   36   37   38   40   52   55 
LCS_GDT     E   151_A     E   151_A     15   18   31      7   11   13   15   17   17   18   18   20   24   28   32   34   35   36   37   41   46   56   62 
LCS_GDT     L   152_A     L   152_A     15   18   31      7   11   13   15   17   17   18   18   20   24   28   32   34   35   36   37   41   51   56   62 
LCS_GDT     R   153_A     R   153_A     15   18   31      7   11   13   15   17   17   18   18   20   24   28   32   34   35   36   37   38   39   42   45 
LCS_GDT     R   154_A     R   154_A     15   18   31      7   11   13   15   17   17   18   18   20   24   28   32   34   35   36   37   38   39   42   45 
LCS_GDT     I   155_A     I   155_A     15   18   31      7   11   13   15   17   17   18   18   20   24   28   32   34   35   36   37   38   39   42   45 
LCS_GDT     E   156_A     E   156_A     15   18   31      7   11   13   15   17   17   18   18   20   24   28   32   34   35   36   37   38   39   42   45 
LCS_GDT     A   157_A     A   157_A     15   18   31      7   11   13   15   17   17   18   18   20   24   28   32   34   35   36   37   38   39   42   45 
LCS_GDT     R   158_A     R   158_A     15   18   31      4   11   13   15   17   17   18   18   20   24   28   32   34   35   36   37   38   39   42   45 
LCS_GDT     R   159_A     R   159_A     15   18   31      3   11   13   15   17   17   18   18   20   24   28   32   34   35   36   37   38   39   42   45 
LCS_GDT     N   160_A     N   160_A     13   18   31      3    4   12   15   17   17   18   18   19   24   27   32   34   35   36   37   38   39   42   45 
LCS_GDT     S   161_A     S   161_A     13   18   31      3    4   12   15   17   17   18   18   19   24   27   30   34   35   36   37   38   38   42   45 
LCS_AVERAGE  LCS_A:  15.41  (   9.39   12.71   24.13 )

GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_AT     12     16     19     21     22     25     30     34     39     42     46     50     53     56     59     64     69     74     80     82 
GDT PERCENT_AT   7.95  10.60  12.58  13.91  14.57  16.56  19.87  22.52  25.83  27.81  30.46  33.11  35.10  37.09  39.07  42.38  45.70  49.01  52.98  54.30
GDT RMS_LOCAL    0.25   0.41   0.88   1.06   1.50   1.95   2.27   2.55   3.18   3.33   3.53   3.96   4.38   4.40   4.72   5.67   5.96   6.20   6.67   6.77
GDT RMS_ALL_AT  20.76  20.69  25.01  25.27  16.15  16.14  16.18  15.72  15.67  15.66  15.80  15.08  14.65  15.04  14.85  19.69  19.65  19.85  19.37  19.34

# Checking swapping
#   possible swapping detected:  F    16_A      F    16_A
#   possible swapping detected:  E    22_A      E    22_A
#   possible swapping detected:  D    33_A      D    33_A
#   possible swapping detected:  E    34_A      E    34_A
#   possible swapping detected:  E    53_A      E    53_A
#   possible swapping detected:  E    57_A      E    57_A
#   possible swapping detected:  D    76_A      D    76_A
#   possible swapping detected:  E    81_A      E    81_A
#   possible swapping detected:  D    82_A      D    82_A
#   possible swapping detected:  F    83_A      F    83_A
#   possible swapping detected:  F    86_A      F    86_A
#   possible swapping detected:  E    89_A      E    89_A
#   possible swapping detected:  E    93_A      E    93_A
#   possible swapping detected:  E    96_A      E    96_A
#   possible swapping detected:  F   101_A      F   101_A
#   possible swapping detected:  D   107_A      D   107_A
#   possible swapping detected:  D   112_A      D   112_A
#   possible swapping detected:  E   118_A      E   118_A
#   possible swapping detected:  E   125_A      E   125_A
#   possible swapping detected:  E   142_A      E   142_A

#      Molecule1      Molecule2  DISTANCE    Mis    MC     All    Dist_max   GDC_mc  GDC_all
LGA    Q    11_A      Q    11_A     3.112     0    0.452   1.166    10.232   55.476   30.053
LGA    A    12_A      A    12_A     1.546     0    0.375   0.360     1.929   75.000   76.286
LGA    V    13_A      V    13_A     1.828     0    0.260   1.217     4.760   70.833   61.361
LGA    E    14_A      E    14_A     3.314     0    0.186   1.162     5.587   55.476   39.841
LGA    D    15_A      D    15_A     3.364     0    0.041   0.374     7.364   59.167   38.571
LGA    F    16_A      F    16_A     2.877     0    0.014   1.437     9.957   62.976   32.424
LGA    L    17_A      L    17_A     3.661     0    0.030   0.154     8.255   52.143   32.202
LGA    R    18_A      R    18_A     3.360     0    0.145   1.235    12.785   59.167   26.623
LGA    V    19_A      V    19_A     2.503     0    0.026   1.377     5.266   62.976   56.122
LGA    H    20_A      H    20_A     2.271     0    0.089   1.146     6.211   68.810   50.429
LGA    S    21_A      S    21_A     1.800     0    0.095   0.605     2.520   72.857   70.238
LGA    E    22_A      E    22_A     2.979     0    0.045   0.992     7.848   59.048   35.291
LGA    L    23_A      L    23_A     3.655     0    0.023   1.160     5.917   48.452   41.726
LGA    V    24_A      V    24_A     3.488     0    0.044   0.881     5.149   50.119   45.714
LGA    H    25_A      H    25_A     2.071     0    0.068   1.494     6.469   64.762   50.571
LGA    R    26_A      R    26_A     3.337     0    0.111   0.769     9.192   43.929   24.242
LGA    L    27_A      L    27_A     5.067     0    0.058   1.431     6.782   25.476   31.071
LGA    A    28_A      A    28_A     5.587     0    0.065   0.063     6.780   19.524   19.905
LGA    G    29_A      G    29_A     6.256     0    0.563   0.563     7.429   14.643   14.643
LGA    D    30_A      D    30_A    10.687     0    0.444   1.129    15.125    1.190    0.595
LGA    P    31_A      P    31_A    10.875     0    0.154   0.176    14.910    0.000    0.000
LGA    P    32_A      P    32_A    10.884     0    0.200   0.492    14.521    0.000    1.088
LGA    D    33_A      D    33_A    17.988     0    0.603   1.031    22.998    0.000    0.000
LGA    E    34_A      E    34_A    18.246     0    0.061   1.095    18.713    0.000    0.000
LGA    L    35_A      L    35_A    18.248     0    0.037   1.392    18.883    0.000    0.000
LGA    F    36_A      F    36_A    18.435     0    0.018   0.280    19.943    0.000    0.000
LGA    Q    37_A      Q    37_A    18.448     0    0.039   0.941    19.190    0.000    0.000
LGA    R    38_A      R    38_A    18.543     0    0.028   0.813    19.557    0.000    0.000
LGA    L    39_A      L    39_A    19.208     0    0.100   0.920    21.894    0.000    0.000
LGA    D    40_A      D    40_A    19.390     0    0.043   0.559    19.935    0.000    0.000
LGA    R    41_A      R    41_A    19.048     0    0.053   1.381    20.604    0.000    0.000
LGA    F    42_A      F    42_A    19.574     0    0.030   1.445    21.957    0.000    0.000
LGA    V    43_A      V    43_A    20.433     0    0.042   0.189    20.909    0.000    0.000
LGA    T    44_A      T    44_A    20.507     0    0.036   0.075    20.778    0.000    0.000
LGA    D    45_A      D    45_A    20.415     0    0.065   0.939    21.407    0.000    0.000
LGA    A    46_A      A    46_A    21.402     0    0.047   0.048    22.425    0.000    0.000
LGA    I    47_A      I    47_A    22.358     0    0.034   1.104    23.892    0.000    0.000
LGA    I    48_A      I    48_A    22.142     0    0.039   0.991    23.339    0.000    0.000
LGA    E    49_A      E    49_A    22.948     0    0.673   0.682    27.680    0.000    0.000
LGA    G    50_A      G    50_A    23.896     0    0.676   0.676    25.194    0.000    0.000
LGA    N    51_A      N    51_A    24.002     0    0.575   0.598    26.866    0.000    0.000
LGA    P    52_A      P    52_A    19.365     0    0.652   0.508    21.953    0.000    0.000
LGA    E    53_A      E    53_A    18.144     0    0.153   1.334    19.698    0.000    0.000
LGA    R    54_A      R    54_A    13.233     0    0.401   1.489    17.189    0.000    0.000
LGA    R    55_A      R    55_A    11.906     0    0.069   1.700    12.644    0.000    1.602
LGA    D    56_A      D    56_A    10.018     0    0.104   0.855    12.862    2.500    1.250
LGA    E    57_A      E    57_A     8.321     0    0.045   1.012    11.216    5.833    3.280
LGA    I    58_A      I    58_A     8.349     0    0.051   0.116     9.870    6.190    3.750
LGA    K    59_A      K    59_A     7.795     0    0.051   1.197    13.133   10.595    5.344
LGA    A    60_A      A    60_A     5.637     0    0.149   0.152     6.441   28.333   27.905
LGA    D    61_A      D    61_A     4.168     0    0.057   0.073     4.979   37.262   36.548
LGA    L    62_A      L    62_A     4.912     0    0.043   1.040     7.860   37.381   25.655
LGA    A    63_A      A    63_A     3.160     0    0.044   0.067     3.813   57.738   54.857
LGA    R    64_A      R    64_A     1.257     0    0.083   0.798     2.995   79.286   75.584
LGA    A    65_A      A    65_A     2.320     0    0.086   0.084     3.236   68.810   65.048
LGA    A    66_A      A    66_A     2.250     0    0.099   0.098     2.898   68.810   66.476
LGA    R    67_A      R    67_A     1.530     0    0.066   1.447     4.018   79.405   62.381
LGA    V    68_A      V    68_A     1.295     0    0.018   0.104     1.595   81.429   78.980
LGA    F    69_A      F    69_A     1.568     0    0.019   1.205     5.204   77.143   59.004
LGA    G    70_A      G    70_A     1.150     0    0.044   0.044     1.286   81.429   81.429
LGA    E    71_A      E    71_A     1.571     0    0.055   0.924     2.139   75.000   76.825
LGA    A    72_A      A    72_A     1.706     0    0.035   0.038     1.860   72.857   72.857
LGA    L    73_A      L    73_A     1.629     0    0.057   1.093     3.429   72.857   73.214
LGA    E    74_A      E    74_A     1.480     0    0.192   0.331     2.032   72.976   77.672
LGA    R    75_A      R    75_A     1.657     0    0.270   1.375     9.098   61.548   49.048
LGA    D    76_A      D    76_A     3.977     0    0.049   1.425     9.132   48.810   27.202
LGA    I    77_A      I    77_A     2.436     0    0.561   1.722     8.974   69.286   43.869
LGA    T    78_A      T    78_A     0.817     0    0.691   0.937     3.372   82.143   76.258
LGA    T    79_A      T    79_A     1.590     0    0.075   0.087     6.320   50.000   44.082
LGA    P    80_A      P    80_A     7.184     0    0.653   0.633     9.010   11.905   15.442
LGA    E    81_A      E    81_A    11.161     0    0.050   1.025    15.513    0.357    0.159
LGA    D    82_A      D    82_A    13.604     0    0.029   1.377    15.424    0.000    0.000
LGA    F    83_A      F    83_A    11.367     0    0.065   1.453    15.408    0.000    0.043
LGA    N    84_A      N    84_A    12.862     0    0.070   0.979    15.553    0.000    0.000
LGA    A    85_A      A    85_A    18.299     0    0.049   0.051    19.917    0.000    0.000
LGA    F    86_A      F    86_A    17.955     0    0.046   1.618    23.247    0.000    0.000
LGA    L    87_A      L    87_A    14.281     0    0.045   0.084    16.320    0.000    0.000
LGA    R    88_A      R    88_A    19.399     0    0.060   1.286    24.701    0.000    0.000
LGA    E    89_A      E    89_A    23.074     0    0.130   1.239    26.538    0.000    0.000
LGA    L    90_A      L    90_A    19.077     0    0.077   0.813    19.959    0.000    0.000
LGA    G    91_A      G    91_A    18.389     0    0.557   0.557    18.389    0.000    0.000
LGA    P    92_A      P    92_A    20.265     0    0.044   0.110    23.570    0.000    0.000
LGA    E    93_A      E    93_A    18.433     0    0.033   0.933    23.525    0.000    0.000
LGA    A    94_A      A    94_A    12.371     0    0.039   0.041    14.764    0.000    0.000
LGA    V    95_A      V    95_A    13.973     0    0.072   1.262    17.875    0.000    0.000
LGA    E    96_A      E    96_A    15.500     0    0.029   1.048    19.478    0.000    0.000
LGA    L    97_A      L    97_A    10.332     0    0.051   0.855    12.051    1.071    0.595
LGA    V    98_A      V    98_A     9.637     0    0.042   0.073    11.551    0.238    0.544
LGA    S    99_A      S    99_A    14.580     0    0.092   0.628    16.701    0.000    0.000
LGA    T   100_A      T   100_A    12.305     0    0.064   0.868    13.341    0.000    0.408
LGA    F   101_A      F   101_A     9.613     0    0.038   1.403    12.655    0.119    0.736
LGA    T   102_A      T   102_A    15.062     0    0.069   0.920    18.838    0.000    0.000
LGA    Q   103_A      Q   103_A    17.044     0    0.054   1.372    19.588    0.000    0.000
LGA    Q   104_A      Q   104_A    13.343     0    0.112   0.973    15.235    0.000    0.741
LGA    F   105_A      F   105_A    17.119     0    0.022   1.300    22.987    0.000    0.000
LGA    V   106_A      V   106_A    21.654     0    0.037   1.020    24.551    0.000    0.000
LGA    D   107_A      D   107_A    19.137     0    0.050   1.107    19.603    0.000    0.000
LGA    V   108_A      V   108_A    18.231     0    0.067   0.179    20.631    0.000    0.000
LGA    I   109_A      I   109_A    24.244     0    0.513   0.538    28.589    0.000    0.000
LGA    R   110_A      R   110_A    24.355     0    0.647   0.880    32.813    0.000    0.000
LGA    G   111_A      G   111_A    19.591     0    0.533   0.533    21.235    0.000    0.000
LGA    D   112_A      D   112_A    15.865     0    0.333   1.087    17.197    0.000    0.000
LGA    P   113_A      P   113_A    18.432     0    0.054   0.342    20.293    0.000    0.000
LGA    Q   114_A      Q   114_A    13.846     0    0.044   0.607    15.205    0.000    0.000
LGA    A   115_A      A   115_A    12.304     0    0.025   0.035    13.779    0.000    0.000
LGA    V   116_A      V   116_A    16.888     0    0.030   0.088    20.225    0.000    0.000
LGA    A   117_A      A   117_A    17.751     0    0.039   0.049    18.043    0.000    0.000
LGA    E   118_A      E   118_A    14.442     0    0.046   0.925    16.451    0.000    0.000
LGA    H   119_A      H   119_A    16.672     0    0.041   1.434    19.491    0.000    0.000
LGA    L   120_A      L   120_A    20.959     0    0.209   0.265    22.959    0.000    0.000
LGA    N   121_A      N   121_A    19.909     0    0.268   1.055    23.361    0.000    0.000
LGA    I   122_A      I   122_A    18.553     0    0.030   0.110    19.630    0.000    0.000
LGA    S   123_A      S   123_A    17.711     0    0.662   0.743    18.487    0.000    0.000
LGA    L   124_A      L   124_A    18.233     0    0.074   1.112    21.952    0.000    0.000
LGA    E   125_A      E   125_A    16.513     0    0.664   1.113    17.883    0.000    0.000
LGA    D   126_A      D   126_A    14.062     0    0.170   0.143    15.388    0.000    0.000
LGA    V   127_A      V   127_A    14.136     0    0.055   1.215    16.472    0.000    0.000
LGA    A   128_A      A   128_A    14.895     0    0.059   0.060    15.894    0.000    0.000
LGA    R   129_A      R   129_A    12.527     0    0.073   1.405    13.419    0.000    0.000
LGA    L   130_A      L   130_A    10.280     0    0.064   0.888    11.130    0.119    0.179
LGA    A   131_A      A   131_A    11.758     0    0.027   0.049    13.086    0.000    0.000
LGA    E   132_A      E   132_A    11.885     0    0.020   0.288    16.163    0.000    0.000
LGA    A   133_A      A   133_A     9.413     0    0.026   0.035    10.230    1.786    1.714
LGA    G   134_A      G   134_A     9.215     0    0.034   0.034     9.686    0.952    0.952
LGA    E   135_A      E   135_A    10.898     0    0.049   0.114    14.448    0.000    0.000
LGA    A   136_A      A   136_A     8.782     0    0.040   0.042     9.438    3.452    3.714
LGA    A   137_A      A   137_A     8.381     0    0.051   0.055     9.455    3.095    3.429
LGA    I   138_A      I   138_A    10.528     0    0.047   0.121    12.220    0.119    0.060
LGA    E   139_A      E   139_A     9.505     0    0.054   0.808     9.777    0.952    2.593
LGA    R   140_A      R   140_A     8.598     0    0.140   1.401    11.464    1.548    1.299
LGA    G   141_A      G   141_A    11.545     0    0.507   0.507    11.556    0.000    0.000
LGA    E   142_A      E   142_A    13.654     0    0.724   1.145    17.946    0.000    0.000
LGA    G   143_A      G   143_A    19.751     0    0.581   0.581    21.765    0.000    0.000
LGA    A   144_A      A   144_A    21.834     0    0.646   0.630    23.270    0.000    0.000
LGA    S   145_A      S   145_A    19.514     0    0.415   0.873    20.315    0.000    0.000
LGA    L   146_A      L   146_A    18.780     0    0.615   1.485    19.482    0.000    0.000
LGA    G   147_A      G   147_A    19.258     0    0.123   0.123    19.366    0.000    0.000
LGA    V   148_A      V   148_A    18.912     0    0.068   0.117    20.112    0.000    0.000
LGA    H   149_A      H   149_A    19.683     0    0.064   1.349    23.461    0.000    0.000
LGA    R   150_A      R   150_A    21.370     0    0.045   0.235    22.989    0.000    0.000
LGA    E   151_A      E   151_A    20.599     0    0.054   0.957    21.464    0.000    0.000
LGA    L   152_A      L   152_A    20.561     0    0.110   0.715    22.660    0.000    0.000
LGA    R   153_A      R   153_A    24.912     0    0.025   0.607    31.882    0.000    0.000
LGA    R   154_A      R   154_A    26.724     0    0.025   1.018    28.727    0.000    0.000
LGA    I   155_A      I   155_A    24.203     0    0.033   1.342    26.022    0.000    0.000
LGA    E   156_A      E   156_A    26.387     0    0.052   1.203    29.773    0.000    0.000
LGA    A   157_A      A   157_A    31.578     0    0.039   0.053    34.058    0.000    0.000
LGA    R   158_A      R   158_A    31.346     0    0.066   1.044    33.356    0.000    0.000
LGA    R   159_A      R   159_A    30.528     0    0.049   1.375    33.977    0.000    0.000
LGA    N   160_A      N   160_A    35.019     0    0.103   1.339    38.632    0.000    0.000
LGA    S   161_A      S   161_A    38.367     0    0.595   0.833    39.407    0.000    0.000

# RMSD_GDC results:       CA      MC common percent     ALL common percent   GDC_mc  GDC_all
NUMBER_OF_ATOMS_AA:      151     604    604  100.00    1194   1194  100.00               151
SUMMARY(RMSD_GDC):    13.713         13.707                 14.266           15.731   13.256

#CA            N1   N2   DIST      N    RMSD    GDT_TS    LGA_S3     LGA_Q 
SUMMARY(GDT)  164  151    4.0     34    2.55    22.351    19.969     1.285

LGA_LOCAL      RMSD:   2.545  Number of atoms:   34  under DIST:   4.00
LGA_ASGN_ATOMS RMSD:  15.724  Number of assigned atoms:  151 
Std_ASGN_ATOMS RMSD:  13.713  Standard rmsd on all 151 assigned CA atoms 

Unitary ROTATION matrix and the SHIFT vector superimpose molecules  (1=>2)
  X_new =  -0.501523 * X  +   0.679363 * Y  +   0.535668 * Z  + -13.985502
  Y_new =   0.184436 * X  +   0.688891 * Y  +  -0.701009 * Z  +   1.701818
  Z_new =  -0.845256 * X  +  -0.252776 * Y  +  -0.470794 * Z  +  13.924289 

Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ:
           Phi     Theta       Psi   [DEG:       Phi     Theta       Psi ]
XYZ:  2.789192  1.007044 -2.648851   [DEG:  159.8090   57.6994 -151.7680 ]
ZXZ:  0.652489  2.060987 -1.861384   [DEG:   37.3849  118.0858 -106.6494 ]
 
# END of job
