
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  ------------ 10/2009               #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

!!!   License for LGA program has expired  !!!
#   For updated version of the LGA program   #
# please contact Adam Zemla:  adamz@llnl.gov #

# Molecule1: number of CA atoms  100 (  812),  selected   78 , name one
# Molecule2: number of CA atoms   78 (  613),  selected   78 , name two
# PARAMETERS: input.pdb  -ie  -3  -d:4  -sda  -swap  -ch1:A  -ch2:A  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    78      21_A - 98_A        1.86     1.86
  LCS_AVERAGE:    100.00

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    78      21_A - 98_A        1.86     1.86
  LCS_AVERAGE:    100.00

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    76      23_A - 98_A        0.99     1.97
  LCS_AVERAGE:     95.05

LCS_GDT    MOLECULE-1    MOLECULE-2     LCS_DETAILS     GDT_DETAILS                                                    TOTAL NUMBER OF RESIDUE PAIRS:   78
LCS_GDT     RESIDUE       RESIDUE       SEGMENT_SIZE    GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair
LCS_GDT   NAME NUMBER   NAME NUMBER    1.0  2.0  5.0    0.5  1.0  1.5  2.0  2.5  3.0  3.5  4.0  4.5  5.0  5.5  6.0  6.5  7.0  7.5  8.0  8.5  9.0  9.5 10.0
LCS_GDT     F    21_A     F    21_A      3   78   78      3    3    3    3    6    6    8   14   36   41   52   57   68   70   77   78   78   78   78   78 
LCS_GDT     Q    22_A     Q    22_A      4   78   78      3    6    6    9   15   26   68   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     G    23_A     G    23_A     76   78   78      3    8   32   64   74   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     Q    24_A     Q    24_A     76   78   78     18   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     Q    25_A     Q    25_A     76   78   78     28   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     D    26_A     D    26_A     76   78   78     28   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     K    27_A     K    27_A     76   78   78     19   59   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     L    28_A     L    28_A     76   78   78     19   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     V    29_A     V    29_A     76   78   78     28   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     L    30_A     L    30_A     76   78   78     28   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     R    31_A     R    31_A     76   78   78     28   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     V    32_A     V    32_A     76   78   78     28   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     D    33_A     D    33_A     76   78   78     12   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     G    34_A     G    34_A     76   78   78     17   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     I    35_A     I    35_A     76   78   78     15   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     L    36_A     L    36_A     76   78   78     14   55   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     N    37_A     N    37_A     76   78   78     18   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     E    38_A     E    38_A     76   78   78     15   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     L    39_A     L    39_A     76   78   78     18   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     D    40_A     D    40_A     76   78   78     15   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     A    41_A     A    41_A     76   78   78     18   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     Q    42_A     Q    42_A     76   78   78     24   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     V    43_A     V    43_A     76   78   78     25   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     L    44_A     L    44_A     76   78   78     25   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     E    45_A     E    45_A     76   78   78     25   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     G    46_A     G    46_A     76   78   78     28   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     I    47_A     I    47_A     76   78   78     28   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     L    48_A     L    48_A     76   78   78     28   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     T    49_A     T    49_A     76   78   78     28   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     R    50_A     R    50_A     76   78   78     15   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     L    51_A     L    51_A     76   78   78     28   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     N    52_A     N    52_A     76   78   78     28   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     G    53_A     G    53_A     76   78   78     28   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     V    54_A     V    54_A     76   78   78     28   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     R    55_A     R    55_A     76   78   78     28   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     Q    56_A     Q    56_A     76   78   78     28   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     F    57_A     F    57_A     76   78   78     19   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     R    58_A     R    58_A     76   78   78     28   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     L    59_A     L    59_A     76   78   78     28   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     D    60_A     D    60_A     76   78   78     17   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     R    61_A     R    61_A     76   78   78      6   28   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     I    62_A     I    62_A     76   78   78      4    9   21   72   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     S    63_A     S    63_A     76   78   78      4   40   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     G    64_A     G    64_A     76   78   78      6   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     E    65_A     E    65_A     76   78   78     28   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     L    66_A     L    66_A     76   78   78     28   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     E    67_A     E    67_A     76   78   78     28   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     V    68_A     V    68_A     76   78   78     28   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     V    69_A     V    69_A     76   78   78     28   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     F    70_A     F    70_A     76   78   78     28   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     D    71_A     D    71_A     76   78   78     12   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     P    72_A     P    72_A     76   78   78     10   62   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     E    73_A     E    73_A     76   78   78     12   62   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     V    74_A     V    74_A     76   78   78     14   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     V    75_A     V    75_A     76   78   78     12   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     S    76_A     S    76_A     76   78   78     12   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     S    77_A     S    77_A     76   78   78     12   57   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     R    78_A     R    78_A     76   78   78     12   56   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     S    79_A     S    79_A     76   78   78     12   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     L    80_A     L    80_A     76   78   78     12   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     V    81_A     V    81_A     76   78   78     10   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     D    82_A     D    82_A     76   78   78     17   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     G    83_A     G    83_A     76   78   78     17   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     I    84_A     I    84_A     76   78   78     17   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     E    85_A     E    85_A     76   78   78     18   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     E    86_A     E    86_A     76   78   78     20   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     D    87_A     D    87_A     76   78   78     17   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     G    88_A     G    88_A     76   78   78     25   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     F    89_A     F    89_A     76   78   78     26   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     G    90_A     G    90_A     76   78   78     28   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     K    91_A     K    91_A     76   78   78     17   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     F    92_A     F    92_A     76   78   78     28   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     K    93_A     K    93_A     76   78   78     28   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     L    94_A     L    94_A     76   78   78     12   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     R    95_A     R    95_A     76   78   78     28   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     V    96_A     V    96_A     76   78   78     25   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     M    97_A     M    97_A     76   78   78     26   64   73   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_GDT     S    98_A     S    98_A     76   78   78      0   12   58   74   75   76   76   77   77   77   77   77   77   77   77   78   78   78   78   78 
LCS_AVERAGE  LCS_A:  98.35  (  95.05  100.00  100.00 )

GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_AT     28     64     73     74     75     76     76     77     77     77     77     77     77     77     77     78     78     78     78     78 
GDT PERCENT_AT  35.90  82.05  93.59  94.87  96.15  97.44  97.44  98.72  98.72  98.72  98.72  98.72  98.72  98.72  98.72 100.00 100.00 100.00 100.00 100.00
GDT RMS_LOCAL    0.33   0.66   0.77   0.81   0.85   0.99   0.99   1.32   1.32   1.32   1.32   1.32   1.32   1.32   1.32   1.86   1.86   1.86   1.86   1.86
GDT RMS_ALL_AT   2.08   2.02   2.01   2.01   2.02   1.97   1.97   1.90   1.90   1.90   1.90   1.90   1.90   1.90   1.90   1.86   1.86   1.86   1.86   1.86

# Checking swapping
#   possible swapping detected:  D    26_A      D    26_A
#   possible swapping detected:  D    33_A      D    33_A
#   possible swapping detected:  E    45_A      E    45_A
#   possible swapping detected:  F    57_A      F    57_A
#   possible swapping detected:  D    60_A      D    60_A
#   possible swapping detected:  E    65_A      E    65_A
#   possible swapping detected:  E    67_A      E    67_A
#   possible swapping detected:  E    73_A      E    73_A
#   possible swapping detected:  D    82_A      D    82_A
#   possible swapping detected:  E    85_A      E    85_A
#   possible swapping detected:  E    86_A      E    86_A
#   possible swapping detected:  D    87_A      D    87_A

#      Molecule1      Molecule2  DISTANCE    Mis    MC     All    Dist_max   GDC_mc  GDC_all
LGA    F    21_A      F    21_A    12.153     0    0.297   1.064    14.683    0.000    0.000
LGA    Q    22_A      Q    22_A     7.386     4    0.506   0.538     8.912   16.429    8.413
LGA    G    23_A      G    23_A     3.918     0    0.176   0.176     5.272   45.952   45.952
LGA    Q    24_A      Q    24_A     0.352     0    0.478   0.445     3.315   88.571   75.767
LGA    Q    25_A      Q    25_A     0.622     0    0.035   0.714     3.073   90.476   82.963
LGA    D    26_A      D    26_A     0.687     0    0.085   0.679     2.330   90.476   87.262
LGA    K    27_A      K    27_A     1.285     0    0.137   0.475     1.929   79.286   77.619
LGA    L    28_A      L    28_A     0.840     0    0.030   0.131     0.854   90.476   90.476
LGA    V    29_A      V    29_A     0.935     0    0.011   0.072     1.497   90.476   86.599
LGA    L    30_A      L    30_A     0.764     0    0.072   0.153     1.116   88.214   89.345
LGA    R    31_A      R    31_A     0.562     0    0.012   0.561     1.856   90.476   82.468
LGA    V    32_A      V    32_A     0.360     0    0.041   0.090     0.537   97.619   97.279
LGA    D    33_A      D    33_A     0.835     0    0.088   0.924     2.987   90.476   81.845
LGA    G    34_A      G    34_A     0.808     0    0.022   0.022     0.958   90.476   90.476
LGA    I    35_A      I    35_A     0.964     0    0.033   0.093     1.418   85.952   88.214
LGA    L    36_A      L    36_A     1.602     0    0.040   0.249     2.440   77.143   71.964
LGA    N    37_A      N    37_A     0.960     0    0.062   1.182     4.039   83.690   72.857
LGA    E    38_A      E    38_A     0.975     0    0.039   1.040     3.686   88.214   70.000
LGA    L    39_A      L    39_A     0.794     0    0.015   0.681     1.708   90.476   86.071
LGA    D    40_A      D    40_A     0.968     0    0.026   0.330     1.813   90.476   84.881
LGA    A    41_A      A    41_A     0.772     0    0.033   0.042     0.883   90.476   90.476
LGA    Q    42_A      Q    42_A     0.471     0    0.020   0.684     2.296   97.619   89.788
LGA    V    43_A      V    43_A     0.533     0    0.031   0.050     0.586   92.857   91.837
LGA    L    44_A      L    44_A     0.564     0    0.019   0.049     0.627   90.476   91.667
LGA    E    45_A      E    45_A     0.679     0    0.037   0.338     1.429   90.476   89.471
LGA    G    46_A      G    46_A     0.645     0    0.015   0.015     0.801   90.476   90.476
LGA    I    47_A      I    47_A     0.628     0    0.042   0.099     0.754   90.476   92.857
LGA    L    48_A      L    48_A     0.741     0    0.011   0.133     0.829   90.476   90.476
LGA    T    49_A      T    49_A     1.188     0    0.020   0.067     1.514   81.548   81.497
LGA    R    50_A      R    50_A     1.362     0    0.079   0.401     4.000   81.429   68.312
LGA    L    51_A      L    51_A     0.675     0    0.040   1.285     2.615   90.476   81.964
LGA    N    52_A      N    52_A     0.491     0    0.013   0.279     1.786   92.857   89.464
LGA    G    53_A      G    53_A     0.523     0    0.012   0.012     0.523   95.238   95.238
LGA    V    54_A      V    54_A     0.544     0    0.025   0.049     0.628   92.857   94.558
LGA    R    55_A      R    55_A     0.713     0    0.039   1.492     6.548   90.476   66.753
LGA    Q    56_A      Q    56_A     0.798     0    0.044   0.579     2.349   90.476   80.847
LGA    F    57_A      F    57_A     1.293     0    0.004   0.093     1.625   81.429   79.091
LGA    R    58_A      R    58_A     1.215     0    0.026   1.283     6.860   85.952   63.117
LGA    L    59_A      L    59_A     0.700     0    0.089   0.140     0.971   92.857   91.667
LGA    D    60_A      D    60_A     0.786     0    0.128   1.216     6.082   90.595   69.286
LGA    R    61_A      R    61_A     1.324     0    0.017   1.066     4.861   77.381   69.567
LGA    I    62_A      I    62_A     2.600     0    0.034   0.081     3.973   62.976   54.821
LGA    S    63_A      S    63_A     1.702     0    0.018   0.120     1.862   77.143   75.714
LGA    G    64_A      G    64_A     0.664     0    0.137   0.137     0.907   92.857   92.857
LGA    E    65_A      E    65_A     0.597     0    0.012   0.438     2.650   95.238   84.921
LGA    L    66_A      L    66_A     0.886     0    0.073   0.119     1.100   88.214   88.214
LGA    E    67_A      E    67_A     0.845     0    0.043   0.312     1.605   90.476   84.497
LGA    V    68_A      V    68_A     0.746     0    0.033   0.087     0.943   90.476   90.476
LGA    V    69_A      V    69_A     0.718     0    0.054   0.114     1.093   90.476   89.184
LGA    F    70_A      F    70_A     0.523     0    0.021   0.262     2.048   95.238   85.844
LGA    D    71_A      D    71_A     0.418     0    0.019   0.876     2.906   97.619   84.464
LGA    P    72_A      P    72_A     1.030     0    0.022   0.059     1.255   83.690   82.721
LGA    E    73_A      E    73_A     1.106     0    0.066   0.278     1.894   83.690   82.487
LGA    V    74_A      V    74_A     0.466     0    0.038   0.053     0.651   97.619   97.279
LGA    V    75_A      V    75_A     0.620     0    0.046   0.061     0.915   92.857   91.837
LGA    S    76_A      S    76_A     0.917     0    0.035   0.619     2.255   90.476   86.190
LGA    S    77_A      S    77_A     1.078     0    0.018   0.045     1.155   81.429   82.937
LGA    R    78_A      R    78_A     1.182     0    0.070   1.269     6.704   85.952   62.771
LGA    S    79_A      S    79_A     0.734     0    0.007   0.078     0.931   90.476   90.476
LGA    L    80_A      L    80_A     0.990     0    0.011   0.505     1.765   90.476   84.881
LGA    V    81_A      V    81_A     0.953     0    0.041   0.081     1.135   90.476   89.184
LGA    D    82_A      D    82_A     0.670     0    0.085   0.839     3.947   90.476   78.393
LGA    G    83_A      G    83_A     0.874     0    0.063   0.063     0.874   90.476   90.476
LGA    I    84_A      I    84_A     0.778     0    0.035   0.100     0.816   90.476   90.476
LGA    E    85_A      E    85_A     0.652     0    0.028   0.545     2.078   90.476   87.619
LGA    E    86_A      E    86_A     0.592     0    0.057   0.611     2.476   90.476   85.608
LGA    D    87_A      D    87_A     0.886     0    0.040   0.849     4.249   90.476   74.345
LGA    G    88_A      G    88_A     0.347     0    0.048   0.048     0.679   97.619   97.619
LGA    F    89_A      F    89_A     0.332     0    0.033   0.077     1.386   97.619   89.784
LGA    G    90_A      G    90_A     0.707     0    0.055   0.055     0.958   92.857   92.857
LGA    K    91_A      K    91_A     0.858     0    0.023   0.693     3.705   90.476   72.328
LGA    F    92_A      F    92_A     0.224     0    0.028   0.102     1.392  100.000   92.338
LGA    K    93_A      K    93_A     0.597     0    0.040   0.920     5.256   95.238   76.138
LGA    L    94_A      L    94_A     0.848     0    0.042   0.739     1.952   88.214   82.679
LGA    R    95_A      R    95_A     0.787     0    0.077   0.690     2.951   90.476   81.861
LGA    V    96_A      V    96_A     0.951     0    0.073   0.071     1.072   88.214   89.184
LGA    M    97_A      M    97_A     0.891     0    0.266   0.772     2.047   88.214   83.929
LGA    S    98_A      S    98_A     2.338     1    0.638   0.590     3.042   64.762   51.508

# RMSD_GDC results:       CA      MC common percent     ALL common percent   GDC_mc  GDC_all
NUMBER_OF_ATOMS_AA:       78     312    312  100.00     613    613  100.00                78
SUMMARY(RMSD_GDC):     1.863          1.835                  2.226           86.496   81.125

#CA            N1   N2   DIST      N    RMSD    GDT_TS    LGA_S3     LGA_Q 
SUMMARY(GDT)  100   78    4.0     77    1.32    93.910    96.806     5.420

LGA_LOCAL      RMSD:   1.321  Number of atoms:   77  under DIST:   4.00
LGA_ASGN_ATOMS RMSD:   1.901  Number of assigned atoms:   78 
Std_ASGN_ATOMS RMSD:   1.863  Standard rmsd on all 78 assigned CA atoms 

Unitary ROTATION matrix and the SHIFT vector superimpose molecules  (1=>2)
  X_new =   0.017805 * X  +  -0.898648 * Y  +   0.438309 * Z  +   8.130388
  Y_new =   0.827819 * X  +   0.259093 * Y  +   0.497581 * Z  + -13.714733
  Z_new =  -0.560712 * X  +   0.353981 * Y  +   0.748531 * Z  +  -7.256626 

Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ:
           Phi     Theta       Psi   [DEG:       Phi     Theta       Psi ]
XYZ:  1.549292  0.595246  0.441735   [DEG:   88.7679   34.1051   25.3095 ]
ZXZ:  2.419442  0.724952 -1.007675   [DEG:  138.6238   41.5367  -57.7355 ]
 
# END of job
