
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  ------------ 10/2009               #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

!!!   License for LGA program has expired  !!!
#   For updated version of the LGA program   #
# please contact Adam Zemla:  adamz@llnl.gov #

# Molecule1: number of CA atoms  151 ( 1155),  selected  151 , name one
# Molecule2: number of CA atoms  311 ( 2370),  selected  151 , name two
# PARAMETERS: input.pdb  -ie  -3  -d:4  -sda  -swap  -ch1:A  -ch2:A  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    91     185_A - 275_A       4.97    10.05
  LCS_AVERAGE:     21.00

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    36     190_A - 225_A       1.88    10.39
  LONGEST_CONTINUOUS_SEGMENT:    36     191_A - 226_A       1.97    10.40
  LCS_AVERAGE:      6.54

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    21     193_A - 213_A       0.97    11.02
  LONGEST_CONTINUOUS_SEGMENT:    21     194_A - 214_A       0.99    11.25
  LCS_AVERAGE:      3.87

LCS_GDT    MOLECULE-1    MOLECULE-2     LCS_DETAILS     GDT_DETAILS                                                    TOTAL NUMBER OF RESIDUE PAIRS:  151
LCS_GDT     RESIDUE       RESIDUE       SEGMENT_SIZE    GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair
LCS_GDT   NAME NUMBER   NAME NUMBER    1.0  2.0  5.0    0.5  1.0  1.5  2.0  2.5  3.0  3.5  4.0  4.5  5.0  5.5  6.0  6.5  7.0  7.5  8.0  8.5  9.0  9.5 10.0
LCS_GDT     E   179_A     E   179_A      8    9   23      5    7    8    9   11   13   15   16   19   19   20   23   24   27   28   30   31   31   31   33 
LCS_GDT     H   180_A     H   180_A      8    9   23      5    7    8    9   11   13   15   16   19   19   20   23   24   27   28   30   31   34   40   48 
LCS_GDT     V   181_A     V   181_A      8    9   23      5    7    8    9   11   13   15   16   19   19   20   23   24   27   28   48   50   59   62   85 
LCS_GDT     M   182_A     M   182_A      8    9   23      5    7    8    9   11   13   15   16   19   19   20   23   24   27   37   65   72   79   86   90 
LCS_GDT     T   183_A     T   183_A      8    9   23      5    7    8    9   11   13   15   16   19   19   20   23   24   27   28   33   36   45   48   64 
LCS_GDT     T   184_A     T   184_A      8    9   77      5    7    8    9   11   13   15   16   19   19   20   23   25   35   38   62   72   79   86   91 
LCS_GDT     L   185_A     L   185_A      8    9   91      3    7    8    9   11   13   15   16   29   44   52   60   76   88   93   98  101  105  106  110 
LCS_GDT     G   186_A     G   186_A      8    9   91      3    7    8    8   10   12   14   22   30   46   50   59   69   86   92   94  101  104  106  109 
LCS_GDT     A   187_A     A   187_A      5    9   91      3    3    6    9   11   13   15   16   19   22   50   54   64   70   78   82   96   99  103  108 
LCS_GDT     G   188_A     G   188_A      5   27   91      3    4   13   21   24   30   41   49   57   62   77   86   92   96   98  103  106  107  110  111 
LCS_GDT     G   189_A     G   189_A      5   35   91      3    4    6    7    9   13   40   50   59   63   76   89   96   98  102  104  106  108  110  111 
LCS_GDT     T   190_A     T   190_A      7   36   91      3    6   21   28   43   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     R   191_A     R   191_A     15   36   91      3    9   23   29   43   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     F   192_A     F   192_A     18   36   91      3   13   25   36   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     E   193_A     E   193_A     21   36   91      5   18   26   36   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     F   194_A     F   194_A     21   36   91      3   18   26   36   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     E   195_A     E   195_A     21   36   91      7   18   26   36   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     C   196_A     C   196_A     21   36   91      7   18   26   36   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     Y   197_A     Y   197_A     21   36   91      7   18   26   36   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     D   198_A     D   198_A     21   36   91      7   18   26   36   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     T   199_A     T   199_A     21   36   91      7   18   26   36   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     S   200_A     S   200_A     21   36   91      7   18   26   36   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     H   201_A     H   201_A     21   36   91      9   18   26   36   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     L   202_A     L   202_A     21   36   91      7   18   26   36   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     Y   203_A     Y   203_A     21   36   91      7   18   26   36   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     N   204_A     N   204_A     21   36   91      7   18   26   36   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     L   205_A     L   205_A     21   36   91      9   18   26   36   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     K   206_A     K   206_A     21   36   91      9   18   26   36   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     H   207_A     H   207_A     21   36   91      9   18   26   36   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     F   208_A     F   208_A     21   36   91      9   18   26   36   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     Y   209_A     Y   209_A     21   36   91      9   18   26   36   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     D   210_A     D   210_A     21   36   91      9   15   24   35   43   57   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     R   211_A     R   211_A     21   36   91      9   18   25   35   43   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     G   212_A     G   212_A     21   36   91      9   18   26   36   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     L   213_A     L   213_A     21   36   91      9   18   26   36   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     V   214_A     V   214_A     21   36   91      9   16   26   36   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     K   215_A     K   215_A     19   36   91      3   14   26   36   46   57   66   75   81   87   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     G   216_A     G   216_A      8   36   91      3   10   24   34   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     P   217_A     P   217_A      8   36   91      7   15   24   36   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     L   218_A     L   218_A      8   36   91      5   18   26   36   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     F   219_A     F   219_A      8   36   91      5   18   26   36   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     I   220_A     I   220_A      8   36   91      6   18   26   36   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     Q   221_A     Q   221_A      8   36   91      5   18   26   36   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     T   222_A     T   222_A      8   36   91      5   10   18   34   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     V   223_A     V   223_A      8   36   91      5   11   18   32   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     F   224_A     F   224_A      8   36   91      5    8   18   26   36   50   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     G   225_A     G   225_A      3   36   91      3    6   15   32   44   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     L   226_A     L   226_A      5   36   91      4    4    7   12   26   49   66   73   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     M   227_A     M   227_A      5    6   91      4    4    6    6    7   12   14   15   16   17   22   42   68   89   94  101  107  109  111  111 
LCS_GDT     G   228_A     G   228_A      5    6   91      4    4    6    6    6   10   11   13   17   23   76   82   85   92   96  100  104  108  110  111 
LCS_GDT     G   229_A     G   229_A      5    6   91      4    4    6    9   23   47   58   70   75   83   90   93   99  102  104  106  107  109  111  111 
LCS_GDT     I   230_A     I   230_A      5    6   91      3    4    6    6    9   10   17   37   62   75   86   93   96  102  104  106  107  109  111  111 
LCS_GDT     G   231_A     G   231_A      4   23   91      3    6   17   21   28   47   52   58   67   73   87   93   96  102  104  106  107  109  111  111 
LCS_GDT     A   232_A     A   232_A     18   23   91     10   17   18   18   20   23   29   43   60   73   81   88   95   99  103  106  107  109  111  111 
LCS_GDT     H   233_A     H   233_A     18   23   91     10   17   18   19   33   47   59   65   78   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     P   234_A     P   234_A     18   23   91     10   17   18   19   24   39   64   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     D   235_A     D   235_A     18   23   91     10   17   21   34   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     D   236_A     D   236_A     18   23   91     10   17   26   36   44   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     V   237_A     V   237_A     18   23   91     10   17   18   19   37   51   62   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     L   238_A     L   238_A     18   23   91     10   17   18   33   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     H   239_A     H   239_A     18   23   91     10   17   26   36   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     M   240_A     M   240_A     18   23   91     10   17   24   35   42   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     K   241_A     K   241_A     18   23   91     10   17   21   30   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     R   242_A     R   242_A     18   23   91      8   17   26   36   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     T   243_A     T   243_A     18   23   91      8   17   25   36   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     A   244_A     A   244_A     18   23   91      8   17   24   36   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     D   245_A     D   245_A     18   23   91      8   17   26   36   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     R   246_A     R   246_A     18   23   91      8   17   20   36   44   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     L   247_A     L   247_A     18   23   91      8   17   18   19   34   56   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     F   248_A     F   248_A     18   23   91      7   17   18   28   43   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     G   249_A     G   249_A     18   23   91      6   18   26   36   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     Q   250_A     Q   250_A      5   23   91      3    7   16   26   43   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     D   251_A     D   251_A      6   23   91      3    7   13   19   27   47   62   73   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     Y   252_A     Y   252_A      8   23   91      3    7   13   19   27   43   58   73   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     R   253_A     R   253_A      8   23   91      3    7   13   17   26   37   58   73   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     W   254_A     W   254_A      8   23   91      3    6   13   17   25   36   58   72   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     S   255_A     S   255_A      8   22   91      3    6   13   17   26   37   58   73   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     V   256_A     V   256_A      8   21   91      3    7   11   16   25   36   58   73   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     L   257_A     L   257_A      8   21   91      4    7   11   17   25   32   40   61   80   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     G   258_A     G   258_A      8   21   91      4    7   13   17   25   36   46   66   80   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     A   259_A     A   259_A      8   21   91      4    7   10   17   25   32   38   48   57   80   90   94   99  102  104  106  107  109  111  111 
LCS_GDT     G   260_A     G   260_A      7   21   91      4    7   13   17   25   32   38   48   62   80   90   94   99  102  104  106  107  109  111  111 
LCS_GDT     R   261_A     R   261_A      7   21   91      3    7   13   17   25   32   38   48   62   77   88   94   99  102  104  106  107  109  111  111 
LCS_GDT     N   262_A     N   262_A      4   12   91      3    7    7    9   17   20   29   36   60   69   89   94   99  102  104  106  107  109  111  111 
LCS_GDT     Q   263_A     Q   263_A     11   12   91      4   13   21   24   30   35   50   66   75   86   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     L   264_A     L   264_A     11   12   91      7   16   21   25   38   50   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     N   265_A     N   265_A     11   12   91      7   16   21   24   38   50   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     I   266_A     I   266_A     11   12   91      7   11   21   24   35   49   59   75   79   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     A   267_A     A   267_A     11   12   91     10   16   21   34   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     A   268_A     A   268_A     11   12   91      7   16   23   34   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     M   269_A     M   269_A     11   12   91      7   16   21   30   43   54   61   75   79   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     S   270_A     S   270_A     11   12   91      7   16   25   35   43   54   61   75   79   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     A   271_A     A   271_A     11   12   91      7   18   26   36   43   57   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     A   272_A     A   272_A     11   12   91      4   10   25   35   42   49   61   75   78   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     M   273_A     M   273_A     11   12   91      3    5   19   27   34   42   52   60   72   85   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     G   274_A     G   274_A      5    6   91      3    5    6    6   11   18   24   27   38   46   53   58   64   72   81   88   97  102  107  109 
LCS_GDT     G   275_A     G   275_A      5    6   91      3    5    6    6    7    8   11   22   26   35   44   54   64   69   75   82   90   99  103  109 
LCS_GDT     H   276_A     H   276_A      5    6   90      3    5    6    6    7    8    8    9   12   15   20   26   47   54   59   69   73   78   83   88 
LCS_GDT     V   277_A     V   277_A      4    6   22      3    3    6    6    7    8    8    9   12   13   14   18   23   26   34   39   70   73   76   81 
LCS_GDT     R   278_A     R   278_A      4    4   16      3    3    5    5    5    7    8    9   12   15   18   21   34   38   42   49   70   73   76   78 
LCS_GDT     V   279_A     V   279_A      4    5   16      3    3    5    5    5    5    7    8   11   16   20   21   24   41   44   47   51   52   65   77 
LCS_GDT     G   280_A     G   280_A      4    5   16      3    4    5    8    8   11   12   13   15   18   20   21   35   41   44   47   51   52   57   71 
LCS_GDT     L   281_A     L   281_A      4    5   16      3    4    4    4    6    8    8   13   14   18   20   21   24   25   30   31   34   39   55   58 
LCS_GDT     E   282_A     E   282_A      4    7   16      3    4    5    5    6    8    9    9   12   13   14   20   24   28   34   39   46   53   58   61 
LCS_GDT     D   283_A     D   283_A      4    7   16      3    4    4    5    6    8    9    9   14   17   23   27   31   37   42   46   54   64   72   77 
LCS_GDT     N   284_A     N   284_A      4    7   16      3    3    4    5    6    7    9   12   15   18   24   28   35   38   43   49   55   71   84   96 
LCS_GDT     L   285_A     L   285_A      4    7   16      3    4    4    5    5    7    9    9   12   15   23   27   33   37   43   52   60   78   91  106 
LCS_GDT     W   286_A     W   286_A      4    7   27      3    4    4    5    6    7   10   14   20   24   28   36   49   61   78   90  101  107  111  111 
LCS_GDT     A   287_A     A   287_A      4    7   27      3    4    4    5    6    8   11   17   42   46   68   81   94   99  104  106  107  109  111  111 
LCS_GDT     G   288_A     G   288_A      4    7   27      3    4    4    5    7   10   14   22   33   40   48   55   70   84   95  102  107  109  111  111 
LCS_GDT     K   289_A     K   289_A      4    5   27      3    4    4    4    7   11   14   24   28   38   47   56   70   73   87   95  105  108  111  111 
LCS_GDT     G   290_A     G   290_A      4    5   27      3    4    4    4    7   11   14   17   23   27   33   41   54   61   72   79   95  100  106  111 
LCS_GDT     R   291_A     R   291_A      4    5   27      3    7   11   14   19   22   29   37   42   46   56   70   93   97  103  105  107  109  111  111 
LCS_GDT     L   292_A     L   292_A      4    5   28      3    4    4    4    7   20   23   39   51   72   84   92   98  102  104  106  107  109  111  111 
LCS_GDT     A   293_A     A   293_A      4    5   28      3    4    4    5    7   10   13   16   25   43   78   92   96  102  104  106  107  109  111  111 
LCS_GDT     E   294_A     E   294_A      4   22   28      3    9   18   23   30   35   43   54   76   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     T   295_A     T   295_A     20   22   28      4   15   21   26   36   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     N   296_A     N   296_A     20   22   28      8   16   21   26   41   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     A   297_A     A   297_A     20   22   28     10   16   21   26   44   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     Q   298_A     Q   298_A     20   22   28     10   16   21   26   41   56   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     Q   299_A     Q   299_A     20   22   28     10   16   21   25   41   57   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     V   300_A     V   300_A     20   22   28     10   16   24   34   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     R   301_A     R   301_A     20   22   28     10   16   21   33   45   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     A   302_A     A   302_A     20   22   28     10   16   21   32   45   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     A   303_A     A   303_A     20   22   28     10   16   24   34   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     R   304_A     R   304_A     20   22   28     10   16   24   34   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     Q   305_A     Q   305_A     20   22   28     10   16   22   33   45   57   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     I   306_A     I   306_A     20   22   28     10   16   24   34   46   58   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     V   307_A     V   307_A     20   22   28     10   16   21   34   46   57   66   75   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     E   308_A     E   308_A     20   22   28      7   16   21   25   29   49   59   73   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     G   309_A     G   309_A     20   22   28      6   16   21   25   31   49   61   73   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     L   310_A     L   310_A     20   22   28      5   16   21   25   29   49   64   73   81   88   91   94   99  102  104  106  107  109  111  111 
LCS_GDT     G   311_A     G   311_A     20   22   28      6   15   20   25   29   30   32   34   43   68   81   93   99  102  104  106  107  109  111  111 
LCS_GDT     L   312_A     L   312_A     20   22   28      5   15   21   25   29   30   32   32   57   74   83   93   99  102  104  106  107  109  111  111 
LCS_GDT     E   313_A     E   313_A     20   22   28      3   15   19   25   29   30   32   32   33   70   83   88   95  102  104  106  107  109  111  111 
LCS_GDT     V   314_A     V   314_A     20   22   28      5   13   19   25   29   43   55   65   72   81   89   93   99  102  104  106  107  109  111  111 
LCS_GDT     A   315_A     A   315_A     12   22   28      3    7   12   21   40   47   52   57   65   71   81   91   96   99  102  104  107  108  110  111 
LCS_GDT     T   316_A     T   316_A      6   22   28      3    5   19   31   40   47   51   55   63   67   74   80   92   98  102  103  105  108  110  111 
LCS_GDT     P   317_A     P   317_A      6   19   28      3    6   10   17   18   46   51   55   60   64   71   77   85   98  102  103  104  108  110  111 
LCS_GDT     A   318_A     A   318_A      6   17   28      3   14   14   19   28   46   51   54   59   64   67   77   85   93   98  103  104  108  110  111 
LCS_GDT     E   319_A     E   319_A      5    7   28      3    4    5    5    8    9   10   10   12   23   45   55   59   60   67   71   74   85   90  104 
LCS_GDT     A   320_A     A   320_A      6    7   28      5    6    6    6    8    9   10   12   18   22   27   30   33   37   39   47   48   48   86   91 
LCS_GDT     R   321_A     R   321_A      6    7   28      5    6    6    6    6    8   12   15   18   20   24   27   32   35   39   44   50   54   86   97 
LCS_GDT     E   322_A     E   322_A      6    7   26      5    6    6    6    6    8   10   12   14   16   16   16   18   20   27   33   41   43   50   53 
LCS_GDT     L   323_A     L   323_A      6    7   19      5    6    6    6    6    8    9   12   14   16   16   16   22   23   26   31   36   43   50   53 
LCS_GDT     L   324_A     L   324_A      6    7   19      5    6    6    6    6    8    9   12   14   16   16   16   18   24   27   38   41   46   60   71 
LCS_GDT     A   325_A     A   325_A      6    7   19      4    6    6    6    8    9   10   12   14   16   16   16   19   24   27   33   36   46   50   53 
LCS_GDT     L   326_A     L   326_A      4    5   17      3    4    4    4    8    9   10   10   12   12   13   14   17   18   22   35   40   46   47   50 
LCS_GDT     K   327_A     K   327_A      4    5   15      3    4    4    4    6    9   10   10   12   12   13   14   24   28   33   35   48   54   57   63 
LCS_GDT     G   328_A     G   328_A      4    5   15      3    3    4    5    8    9   10   11   16   22   28   40   48   60   67   75   78   83   95   99 
LCS_GDT     G   329_A     G   329_A      4    5   15      0    3    5    6   12   18   24   27   35   42   52   58   64   69   75   80   89   95  101  106 
LCS_AVERAGE  LCS_A:  10.47  (   3.87    6.54   21.00 )

GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_AT     10     18     26     36     46     58     66     75     81     88     91     94     99    102    104    106    107    109    111    111 
GDT PERCENT_AT   3.22   5.79   8.36  11.58  14.79  18.65  21.22  24.12  26.05  28.30  29.26  30.23  31.83  32.80  33.44  34.08  34.41  35.05  35.69  35.69
GDT RMS_LOCAL    0.21   0.67   0.89   1.26   1.71   2.14   2.28   2.57   2.83   3.13   3.21   3.42   3.63   3.78   3.93   4.07   4.14   4.39   4.66   4.49
GDT RMS_ALL_AT  14.87  10.72  10.73  10.68  10.42  10.24  10.24  10.21  10.30  10.28  10.27  10.31  10.35  10.37  10.42  10.44  10.44  10.51  10.58  10.36

# Checking swapping
#   possible swapping detected:  E   193_A      E   193_A
#   possible swapping detected:  Y   197_A      Y   197_A
#   possible swapping detected:  D   198_A      D   198_A
#   possible swapping detected:  Y   203_A      Y   203_A
#   possible swapping detected:  D   236_A      D   236_A
#   possible swapping detected:  D   245_A      D   245_A
#   possible swapping detected:  Y   252_A      Y   252_A
#   possible swapping detected:  E   282_A      E   282_A
#   possible swapping detected:  D   283_A      D   283_A
#   possible swapping detected:  E   294_A      E   294_A
#   possible swapping detected:  E   308_A      E   308_A
#   possible swapping detected:  E   322_A      E   322_A

#      Molecule1      Molecule2  DISTANCE    Mis    MC     All    Dist_max   GDC_mc  GDC_all
LGA    E   179_A      E   179_A    26.156     0    0.254   0.488    33.528    0.000    0.000
LGA    H   180_A      H   180_A    26.623     0    0.060   0.160    30.274    0.000    0.000
LGA    V   181_A      V   181_A    19.999     0    0.019   0.066    22.426    0.000    0.000
LGA    M   182_A      M   182_A    17.117     0    0.131   0.675    18.341    0.000    0.000
LGA    T   183_A      T   183_A    21.872     0    0.014   0.050    25.941    0.000    0.000
LGA    T   184_A      T   184_A    20.416     0    0.161   0.285    23.913    0.000    0.000
LGA    L   185_A      L   185_A    13.733     0    0.040   1.336    16.293    0.000    0.000
LGA    G   186_A      G   186_A    13.660     0    0.502   0.502    13.994    0.000    0.000
LGA    A   187_A      A   187_A    15.003     0    0.121   0.118    16.594    0.000    0.000
LGA    G   188_A      G   188_A     8.892     0    0.669   0.669    10.831    2.619    2.619
LGA    G   189_A      G   189_A     7.589     0    0.134   0.134     7.646   15.476   15.476
LGA    T   190_A      T   190_A     2.506     0    0.661   0.522     5.359   53.690   44.218
LGA    R   191_A      R   191_A     2.475     0    0.195   1.240     4.218   66.786   59.004
LGA    F   192_A      F   192_A     1.151     0    0.069   0.259     2.262   75.119   89.221
LGA    E   193_A      E   193_A     1.356     0    0.034   0.700     2.776   81.429   76.825
LGA    F   194_A      F   194_A     1.860     0    0.062   0.170     4.216   72.857   57.359
LGA    E   195_A      E   195_A     2.123     0    0.071   0.901     6.119   70.833   51.164
LGA    C   196_A      C   196_A     1.881     0    0.226   0.288     2.460   68.810   67.460
LGA    Y   197_A      Y   197_A     2.925     0    0.209   0.236     4.024   55.357   49.048
LGA    D   198_A      D   198_A     2.858     0    0.073   0.885     4.950   59.048   53.095
LGA    T   199_A      T   199_A     2.892     0    0.035   0.253     3.681   59.048   54.218
LGA    S   200_A      S   200_A     2.334     0    0.111   0.132     3.004   64.881   61.111
LGA    H   201_A      H   201_A     1.894     0    0.083   0.946     4.230   70.833   66.524
LGA    L   202_A      L   202_A     1.169     0    0.013   1.422     3.214   86.190   74.762
LGA    Y   203_A      Y   203_A     0.903     0    0.034   1.391     9.161   90.476   51.825
LGA    N   204_A      N   204_A     0.920     0    0.020   0.137     1.869   92.976   83.988
LGA    L   205_A      L   205_A     0.519     0    0.050   1.437     4.953   90.595   68.750
LGA    K   206_A      K   206_A     1.478     0    0.101   1.374     6.592   77.381   56.508
LGA    H   207_A      H   207_A     2.078     0    0.080   0.219     4.720   70.833   54.714
LGA    F   208_A      F   208_A     0.909     0    0.046   0.423     2.174   83.690   83.333
LGA    Y   209_A      Y   209_A     1.997     0    0.015   1.100    10.469   67.143   37.619
LGA    D   210_A      D   210_A     3.315     0    0.071   0.185     4.010   50.119   45.952
LGA    R   211_A      R   211_A     2.988     0    0.016   0.106     3.932   57.143   51.429
LGA    G   212_A      G   212_A     2.288     0    0.072   0.072     2.422   68.810   68.810
LGA    L   213_A      L   213_A     0.287     0    0.128   0.179     2.225   88.333   83.929
LGA    V   214_A      V   214_A     1.981     0    0.050   0.081     2.241   72.976   70.612
LGA    K   215_A      K   215_A     2.842     0    0.130   0.600     7.999   65.000   39.577
LGA    G   216_A      G   216_A     2.410     0    0.609   0.609     4.220   55.952   55.952
LGA    P   217_A      P   217_A     1.810     0    0.036   0.285     3.146   68.810   63.878
LGA    L   218_A      L   218_A     1.105     0    0.056   1.013     3.652   83.690   71.726
LGA    F   219_A      F   219_A     1.857     0    0.060   0.947     3.079   72.857   71.169
LGA    I   220_A      I   220_A     1.807     0    0.023   0.069     2.513   72.857   68.869
LGA    Q   221_A      Q   221_A     1.514     0    0.083   0.671     3.467   75.000   66.085
LGA    T   222_A      T   222_A     2.031     0    0.140   1.043     4.851   66.786   63.741
LGA    V   223_A      V   223_A     2.121     0    0.123   0.210     3.026   59.167   62.721
LGA    F   224_A      F   224_A     3.370     0    0.603   1.450    10.589   63.214   28.312
LGA    G   225_A      G   225_A     2.030     0    0.166   0.166     3.021   61.190   61.190
LGA    L   226_A      L   226_A     4.434     0    0.572   1.098     8.120   37.381   25.476
LGA    M   227_A      M   227_A     9.756     0    0.602   1.297    14.260    1.905    0.952
LGA    G   228_A      G   228_A    10.180     0    0.103   0.103    10.180    1.190    1.190
LGA    G   229_A      G   229_A     5.163     0    0.226   0.226     6.176   30.952   30.952
LGA    I   230_A      I   230_A     6.137     0    0.639   0.850    12.247   16.786    8.929
LGA    G   231_A      G   231_A     6.936     0    0.687   0.687     8.524   12.381   12.381
LGA    A   232_A      A   232_A     8.232     0    0.695   0.697     9.067    5.833    5.238
LGA    H   233_A      H   233_A     5.274     0    0.085   1.150     5.977   29.048   35.286
LGA    P   234_A      P   234_A     4.245     0    0.109   0.259     4.868   41.905   37.415
LGA    D   235_A      D   235_A     1.616     0    0.053   0.375     3.292   70.833   65.060
LGA    D   236_A      D   236_A     3.614     0    0.014   0.321     6.252   46.786   34.167
LGA    V   237_A      V   237_A     4.337     0    0.031   0.064     6.565   45.119   33.878
LGA    L   238_A      L   238_A     2.014     0    0.105   0.978     4.250   69.048   58.095
LGA    H   239_A      H   239_A     2.364     0    0.039   1.311     9.652   64.881   35.571
LGA    M   240_A      M   240_A     3.623     0    0.036   1.018     5.572   50.119   40.238
LGA    K   241_A      K   241_A     2.677     0    0.019   1.308     7.890   65.000   42.963
LGA    R   242_A      R   242_A     1.890     0    0.105   1.065     8.667   70.833   46.494
LGA    T   243_A      T   243_A     2.853     0    0.008   0.102     4.481   57.262   50.408
LGA    A   244_A      A   244_A     2.621     0    0.018   0.016     2.848   60.952   60.190
LGA    D   245_A      D   245_A     1.631     0    0.023   0.863     3.242   70.833   65.060
LGA    R   246_A      R   246_A     3.091     0    0.077   1.398    12.336   52.024   26.797
LGA    L   247_A      L   247_A     3.799     0    0.034   0.742     5.221   43.452   37.500
LGA    F   248_A      F   248_A     3.196     0    0.053   0.193     8.166   61.429   32.771
LGA    G   249_A      G   249_A     1.253     0    0.561   0.561     2.511   75.357   75.357
LGA    Q   250_A      Q   250_A     3.297     0    0.205   1.380     7.698   47.857   34.127
LGA    D   251_A      D   251_A     4.880     0    0.248   0.885     7.966   29.048   22.262
LGA    Y   252_A      Y   252_A     5.374     0    0.168   1.287    15.139   27.500   11.984
LGA    R   253_A      R   253_A     5.782     0    0.193   1.523     6.144   21.429   29.784
LGA    W   254_A      W   254_A     5.830     0    0.087   1.521     9.409   20.357   13.946
LGA    S   255_A      S   255_A     5.641     0    0.064   0.120     5.807   25.000   23.810
LGA    V   256_A      V   256_A     5.665     0    0.098   1.308     8.165   20.357   22.517
LGA    L   257_A      L   257_A     6.263     0    0.074   1.115     9.419   20.357   14.167
LGA    G   258_A      G   258_A     5.983     0    0.071   0.071     6.996   16.310   16.310
LGA    A   259_A      A   259_A     7.796     0    0.013   0.015     8.647    9.405    8.095
LGA    G   260_A      G   260_A     8.295     0    0.553   0.553     8.295   10.238   10.238
LGA    R   261_A      R   261_A     8.269     0    0.677   1.232    16.184    4.048    1.472
LGA    N   262_A      N   262_A     7.455     0    0.081   1.045    10.070   11.310    6.905
LGA    Q   263_A      Q   263_A     4.618     0    0.587   1.303     6.933   38.810   29.524
LGA    L   264_A      L   264_A     3.383     0    0.057   0.863     4.195   50.119   46.012
LGA    N   265_A      N   265_A     3.487     0    0.062   0.135     5.315   48.333   40.655
LGA    I   266_A      I   266_A     3.929     0    0.025   0.253     6.762   46.667   35.536
LGA    A   267_A      A   267_A     2.009     0    0.040   0.046     2.639   66.905   68.095
LGA    A   268_A      A   268_A     1.939     0    0.019   0.026     2.679   65.000   64.952
LGA    M   269_A      M   269_A     3.763     0    0.006   0.977     5.792   43.452   39.940
LGA    S   270_A      S   270_A     3.905     0    0.192   0.220     4.392   41.786   41.270
LGA    A   271_A      A   271_A     3.263     0    0.201   0.199     4.050   45.119   47.524
LGA    A   272_A      A   272_A     4.560     0    0.585   0.525     7.313   25.000   28.667
LGA    M   273_A      M   273_A     5.732     0    0.138   1.198     9.139   14.762   30.952
LGA    G   274_A      G   274_A    12.217     0    0.087   0.087    15.301    0.119    0.119
LGA    G   275_A      G   275_A    13.275     0    0.423   0.423    16.583    0.000    0.000
LGA    H   276_A      H   276_A    17.501     0    0.049   0.922    20.640    0.000    0.000
LGA    V   277_A      V   277_A    18.752     0    0.083   1.184    21.265    0.000    0.000
LGA    R   278_A      R   278_A    19.249     0    0.661   1.125    29.304    0.000    0.000
LGA    V   279_A      V   279_A    20.175     0    0.237   1.057    23.292    0.000    0.000
LGA    G   280_A      G   280_A    20.075     0    0.683   0.683    20.249    0.000    0.000
LGA    L   281_A      L   281_A    23.099     0    0.116   1.102    26.923    0.000    0.000
LGA    E   282_A      E   282_A    22.673     0    0.273   0.760    26.767    0.000    0.000
LGA    D   283_A      D   283_A    17.517     0    0.586   1.123    19.286    0.000    0.000
LGA    N   284_A      N   284_A    16.684     0    0.125   1.010    20.616    0.000    0.000
LGA    L   285_A      L   285_A    16.034     0    0.593   0.487    19.821    0.000    0.000
LGA    W   286_A      W   286_A    14.123     0    0.171   0.414    23.364    0.000    0.000
LGA    A   287_A      A   287_A    10.364     0    0.583   0.525    12.110    0.000    0.000
LGA    G   288_A      G   288_A    13.604     0    0.467   0.467    13.626    0.000    0.000
LGA    K   289_A      K   289_A    15.236     0    0.450   1.012    16.359    0.000    0.000
LGA    G   290_A      G   290_A    18.248     0    0.216   0.216    18.248    0.000    0.000
LGA    R   291_A      R   291_A    13.098     0    0.616   1.650    17.529    0.000    0.000
LGA    L   292_A      L   292_A    10.594     0    0.020   1.363    11.939    0.357    0.357
LGA    A   293_A      A   293_A    10.321     0    0.596   0.604    11.714    0.476    0.381
LGA    E   294_A      E   294_A     7.414     0    0.077   0.988     9.321   12.381    8.095
LGA    T   295_A      T   295_A     3.391     0    0.599   1.335     4.196   48.333   46.259
LGA    N   296_A      N   296_A     2.838     0    0.045   0.848     5.065   55.357   49.762
LGA    A   297_A      A   297_A     2.615     0    0.060   0.061     2.807   57.143   57.143
LGA    Q   298_A      Q   298_A     3.336     0    0.027   0.781     6.654   51.786   38.624
LGA    Q   299_A      Q   299_A     2.899     0    0.048   0.754     7.241   59.167   41.376
LGA    V   300_A      V   300_A     1.195     0    0.015   0.058     1.759   79.286   82.789
LGA    R   301_A      R   301_A     2.036     0    0.033   1.248     7.278   66.786   46.234
LGA    A   302_A      A   302_A     2.546     0    0.011   0.021     2.900   62.857   61.714
LGA    A   303_A      A   303_A     1.231     0    0.030   0.027     1.616   79.286   79.714
LGA    R   304_A      R   304_A     1.831     0    0.029   1.164     3.573   69.048   61.645
LGA    Q   305_A      Q   305_A     3.202     0    0.032   0.970     7.561   53.571   40.053
LGA    I   306_A      I   306_A     2.023     0    0.016   0.675     4.571   66.786   64.702
LGA    V   307_A      V   307_A     2.312     0    0.036   0.101     3.729   57.738   57.687
LGA    E   308_A      E   308_A     4.956     0    0.060   1.233     8.975   29.524   21.852
LGA    G   309_A      G   309_A     5.418     0    0.110   0.110     5.457   27.500   27.500
LGA    L   310_A      L   310_A     4.629     0    0.032   0.228     6.052   25.357   46.429
LGA    G   311_A      G   311_A     7.672     0    0.037   0.037     8.664    7.619    7.619
LGA    L   312_A      L   312_A     6.723     0    0.094   0.938     8.736   12.500   14.821
LGA    E   313_A      E   313_A     7.933     0    0.065   1.181    13.361    8.571    3.862
LGA    V   314_A      V   314_A     6.062     0    0.119   0.923     6.776   15.238   22.653
LGA    A   315_A      A   315_A     7.910     0    0.074   0.090     8.364    6.667    6.286
LGA    T   316_A      T   316_A     9.884     0    0.053   0.275    11.263    0.595    0.408
LGA    P   317_A      P   317_A    10.833     0    0.611   0.570    11.682    0.000    0.000
LGA    A   318_A      A   318_A    12.001     0    0.144   0.148    14.073    0.000    0.000
LGA    E   319_A      E   319_A    17.405     0    0.108   1.044    20.266    0.000    0.000
LGA    A   320_A      A   320_A    16.951     0    0.588   0.555    17.054    0.000    0.000
LGA    R   321_A      R   321_A    16.792     0    0.070   1.462    19.024    0.000    0.000
LGA    E   322_A      E   322_A    22.191     0    0.035   0.724    27.269    0.000    0.000
LGA    L   323_A      L   323_A    21.446     0    0.033   0.988    23.380    0.000    0.000
LGA    L   324_A      L   324_A    18.290     0    0.253   1.369    20.221    0.000    0.000
LGA    A   325_A      A   325_A    22.395     0    0.438   0.423    24.895    0.000    0.000
LGA    L   326_A      L   326_A    23.271     0    0.680   0.685    25.583    0.000    0.000
LGA    K   327_A      K   327_A    23.130     0    0.083   1.015    24.943    0.000    0.000
LGA    G   328_A      G   328_A    17.570     0    0.433   0.433    19.086    0.000    0.000
LGA    G   329_A      G   329_A    15.021     0    0.463   0.463    15.569    0.000    0.000

# RMSD_GDC results:       CA      MC common percent     ALL common percent   GDC_mc  GDC_all
NUMBER_OF_ATOMS_AA:      151     604    604  100.00    1155   1155  100.00               311
SUMMARY(RMSD_GDC):     9.901          9.804                 10.562           17.178   15.022

#CA            N1   N2   DIST      N    RMSD    GDT_TS    LGA_S3     LGA_Q 
SUMMARY(GDT)  151  311    4.0     75    2.57    18.891    16.927     2.804

LGA_LOCAL      RMSD:   2.574  Number of atoms:   75  under DIST:   4.00
LGA_ASGN_ATOMS RMSD:  10.209  Number of assigned atoms:  151 
Std_ASGN_ATOMS RMSD:   9.901  Standard rmsd on all 151 assigned CA atoms 

Unitary ROTATION matrix and the SHIFT vector superimpose molecules  (1=>2)
  X_new =  -0.976058 * X  +  -0.184430 * Y  +   0.115311 * Z  + 106.715157
  Y_new =   0.047289 * X  +  -0.697388 * Y  +  -0.715132 * Z  +  -2.472340
  Z_new =   0.212308 * X  +  -0.692557 * Y  +   0.689413 * Z  +  46.126373 

Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ:
           Phi     Theta       Psi   [DEG:       Phi     Theta       Psi ]
XYZ:  3.093181 -0.213937 -0.787673   [DEG:  177.2262  -12.2577  -45.1303 ]
ZXZ:  0.159868  0.810118  2.844131   [DEG:    9.1598   46.4163  162.9567 ]
 
# END of job
