
#######################################################
#                                                     #
#                        LGA                          #
#                  ---------------                    #
#                                                     #
#               Local-Global Alignment                #
#        A Method for Finding 3-D Similarities        #
#               in Protein Structures                 #
#                                                     #
#                  ------------ 10/2009               #
#                                                     #
#      Adam Zemla (adamz@llnl.gov)                    #
#      Lawrence Livermore National Laboratory, CA     #
#                                                     #
#######################################################

!!!   License for LGA program has expired  !!!
#   For updated version of the LGA program   #
# please contact Adam Zemla:  adamz@llnl.gov #

# Molecule1: number of CA atoms  160 ( 1315),  selected  160 , name one
# Molecule2: number of CA atoms  160 ( 1315),  selected  160 , name two
# PARAMETERS: input.pdb  -ie  -3  -d:4  -sda  -swap  -ch1:A  -ch2:A  
# FIXED Atom-Atom correspondence
# GDT and LCS analysis 

LCS - RMSD CUTOFF   5.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:   150       1_A - 150_A       4.92    11.78
  LCS_AVERAGE:     88.83

LCS - RMSD CUTOFF   2.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:   139       1_A - 139_A       1.98    11.98
  LCS_AVERAGE:     77.41

LCS - RMSD CUTOFF   1.00      length       segment         l_RMS    g_RMS
  LONGEST_CONTINUOUS_SEGMENT:    40      79_A - 118_A       1.00    11.98
  LCS_AVERAGE:     16.26

LCS_GDT    MOLECULE-1    MOLECULE-2     LCS_DETAILS     GDT_DETAILS                                                    TOTAL NUMBER OF RESIDUE PAIRS:  160
LCS_GDT     RESIDUE       RESIDUE       SEGMENT_SIZE    GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair
LCS_GDT   NAME NUMBER   NAME NUMBER    1.0  2.0  5.0    0.5  1.0  1.5  2.0  2.5  3.0  3.5  4.0  4.5  5.0  5.5  6.0  6.5  7.0  7.5  8.0  8.5  9.0  9.5 10.0
LCS_GDT     M     1_A     M     1_A     31  139  150      4   16   77  109  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     K     2_A     K     2_A     33  139  150     22   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     N     3_A     N     3_A     33  139  150     26   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     F     4_A     F     4_A     33  139  150     19   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     E     5_A     E     5_A     33  139  150     12   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     I     6_A     I     6_A     33  139  150     19   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     V     7_A     V     7_A     33  139  150     16   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     T     8_A     T     8_A     33  139  150     21   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     V     9_A     V     9_A     33  139  150      9   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     T    10_A     T    10_A     33  139  150      8   67   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     P    11_A     P    11_A     33  139  150     12   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     D    12_A     D    12_A     33  139  150      6   62   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     H    13_A     H    13_A     33  139  150     13   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     A    14_A     A    14_A     33  139  150     27   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     E    15_A     E    15_A     33  139  150     18   67   98  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     Q    16_A     Q    16_A     33  139  150     27   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     L    17_A     L    17_A     33  139  150     27   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     I    18_A     I    18_A     33  139  150     27   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     S    19_A     S    19_A     33  139  150     27   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     M    20_A     M    20_A     33  139  150     21   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     I    21_A     I    21_A     33  139  150     27   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     H    22_A     H    22_A     33  139  150     27   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     E    23_A     E    23_A     33  139  150     24   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     L    24_A     L    24_A     33  139  150     13   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     A    25_A     A    25_A     33  139  150     11   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     E    26_A     E    26_A     33  139  150     17   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     F    27_A     F    27_A     33  139  150     14   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     E    28_A     E    28_A     33  139  150     14   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     K    29_A     K    29_A     33  139  150      8   58   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     M    30_A     M    30_A     33  139  150      4   57   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     K    31_A     K    31_A     33  139  150     12   63   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     S    32_A     S    32_A     33  139  150     11   54   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     S    33_A     S    33_A     33  139  150      5   53   96  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     V    34_A     V    34_A     33  139  150      5   18   52   95  119  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     V    35_A     V    35_A     29  139  150      3    5   14   91  118  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     N    36_A     N    36_A     21  139  150      8   18   61   95  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     T    37_A     T    37_A     16  139  150      8   32   71  101  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     A    38_A     A    38_A     16  139  150      8   32   77  105  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     E    39_A     E    39_A     16  139  150      8   19   38   74   99  125  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     K    40_A     K    40_A     16  139  150      6   15   38   75   97  123  130  134  134  136  137  140  140  140  141  142  144  145  145  146 
LCS_GDT     L    41_A     L    41_A     16  139  150      6   30   65  100  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     R    42_A     R    42_A     16  139  150      8   25   59   94  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     K    43_A     K    43_A     16  139  150      8   25   44   77  110  125  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     D    44_A     D    44_A     16  139  150      8   30   62   95  121  128  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     I    45_A     I    45_A     16  139  150     11   53   87  109  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     E    46_A     E    46_A     16  139  150     11   38   86  108  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     N    47_A     N    47_A     16  139  150      9   38   77  105  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     K    48_A     K    48_A     16  139  150      3   38   78  105  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     A    49_A     A    49_A     16  139  150      4    7   24   57   88  121  130  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     V    50_A     V    50_A     16  139  150      5   38   78  105  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     H    51_A     H    51_A     19  139  150     21   57   97  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     G    52_A     G    52_A     19  139  150      9   58   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     F    53_A     F    53_A     19  139  150     15   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     I    54_A     I    54_A     19  139  150     27   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     A    55_A     A    55_A     19  139  150     27   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     F    56_A     F    56_A     19  139  150     27   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     I    57_A     I    57_A     19  139  150     26   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     G    58_A     G    58_A     19  139  150     27   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     E    59_A     E    59_A     19  139  150      4   41   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     E    60_A     E    60_A     19  139  150     19   65   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     P    61_A     P    61_A     19  139  150     27   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     A    62_A     A    62_A     19  139  150     19   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     G    63_A     G    63_A     19  139  150     27   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     M    64_A     M    64_A     19  139  150     12   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     N    65_A     N    65_A     19  139  150     12   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     L    66_A     L    66_A     19  139  150     27   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     F    67_A     F    67_A     19  139  150     10   51   93  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     Y    68_A     Y    68_A     19  139  150      3   62   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     Y    69_A     Y    69_A     19  139  150      8   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     A    70_A     A    70_A     18  139  150      8   50   99  111  119  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     Y    71_A     Y    71_A      5  139  150      3    8   22   81  108  117  122  127  133  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     S    72_A     S    72_A      4  139  150      0    3    7   22   34   52  114  121  126  133  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     T    73_A     T    73_A      4  139  150      3    3    4    5   14   35   67  113  125  133  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     W    74_A     W    74_A      4  139  150      3    4   25   59  108  117  122  128  133  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     V    75_A     V    75_A      4  139  150      3    4   12   24  106  117  123  129  133  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     G    76_A     G    76_A      4  139  150      3   29   82  110  118  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     Q    77_A     Q    77_A     31  139  150      9   36   77  105  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     Y    78_A     Y    78_A     33  139  150     13   56   97  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     L    79_A     L    79_A     40  139  150     27   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     H    80_A     H    80_A     40  139  150     27   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     M    81_A     M    81_A     40  139  150     21   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     E    82_A     E    82_A     40  139  150     22   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     D    83_A     D    83_A     40  139  150     27   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     L    84_A     L    84_A     40  139  150     27   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     Y    85_A     Y    85_A     40  139  150     21   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     I    86_A     I    86_A     40  139  150     27   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     R    87_A     R    87_A     40  139  150      5   60   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     P    88_A     P    88_A     40  139  150     21   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     Q    89_A     Q    89_A     40  139  150     11   57   98  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     F    90_A     F    90_A     40  139  150     12   65   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     R    91_A     R    91_A     40  139  150     21   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     R    92_A     R    92_A     40  139  150     21   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     M    93_A     M    93_A     40  139  150     21   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     G    94_A     G    94_A     40  139  150     27   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     L    95_A     L    95_A     40  139  150     17   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     A    96_A     A    96_A     40  139  150      4   56   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     R    97_A     R    97_A     40  139  150     15   63   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     T    98_A     T    98_A     40  139  150     17   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     L    99_A     L    99_A     40  139  150     27   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     W   100_A     W   100_A     40  139  150     27   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     K   101_A     K   101_A     40  139  150     21   65   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     K   102_A     K   102_A     40  139  150     21   64   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     L   103_A     L   103_A     40  139  150     10   64   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     A   104_A     A   104_A     40  139  150     11   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     E   105_A     E   105_A     40  139  150     21   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     L   106_A     L   106_A     40  139  150     12   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     A   107_A     A   107_A     40  139  150     10   59   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     R   108_A     R   108_A     40  139  150     10   50   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     D   109_A     D   109_A     40  139  150     10   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     K   110_A     K   110_A     40  139  150     10   53   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     G   111_A     G   111_A     40  139  150      6   39   86  111  117  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     I   112_A     I   112_A     40  139  150     10   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     V   113_A     V   113_A     40  139  150     21   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     R   114_A     R   114_A     40  139  150     27   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     L   115_A     L   115_A     40  139  150     27   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     E   116_A     E   116_A     40  139  150     27   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     W   117_A     W   117_A     40  139  150     22   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     A   118_A     A   118_A     40  139  150     15   64   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     V   119_A     V   119_A     23  139  150      5   64   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     L   120_A     L   120_A     21  139  150      8   54   98  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     D   121_A     D   121_A     21  139  150      6   49   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     W   122_A     W   122_A     21  139  150      5   28   89  111  120  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     N   123_A     N   123_A     21  139  150     27   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     K   124_A     K   124_A     21  139  150     27   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     N   125_A     N   125_A     21  139  150     27   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     A   126_A     A   126_A     21  139  150     27   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     I   127_A     I   127_A     21  139  150     13   63   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     A   128_A     A   128_A     21  139  150      7   20   91  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     L   129_A     L   129_A     21  139  150     20   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     Y   130_A     Y   130_A     21  139  150     14   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     D   131_A     D   131_A     21  139  150     12   58   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     T   132_A     T   132_A     21  139  150     16   63   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     V   133_A     V   133_A     21  139  150      4   14   84  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     D   134_A     D   134_A      8  139  150      6   14   78  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     Y   135_A     Y   135_A      8  139  150      6   18   90  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     V   136_A     V   136_A      8  139  150      4   49   94  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     N   137_A     N   137_A      8  139  150     22   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     L   138_A     L   138_A      8  139  150     22   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     T   139_A     T   139_A      8  139  150     20   68   99  111  121  129  132  134  134  136  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     K   140_A     K   140_A      4   95  150      3    4   15   24   35   56   77  116  123  129  137  140  140  140  141  143  144  145  145  146 
LCS_GDT     S   141_A     S   141_A      4   20  150      3    4    4    4    6    6   22   43   69   90  107  122  132  137  141  143  144  145  145  146 
LCS_GDT     E   142_A     E   142_A      4   20  150      3    4    4    6   12   17   19   31   40   51   62  121  130  135  141  143  144  145  145  146 
LCS_GDT     G   143_A     G   143_A     18   20  150      4   12   18   18   19   19   19   21   23   24   65   74   87  124  140  143  144  145  145  146 
LCS_GDT     W   144_A     W   144_A     18   20  150      4   17   18   18   19   19   20   37   51   63   92  105  133  138  141  143  144  145  145  146 
LCS_GDT     F   145_A     F   145_A     18   20  150      4   17   18   18   19   19   19   27   81   92  127  136  136  140  141  142  144  145  145  146 
LCS_GDT     T   146_A     T   146_A     18   20  150      7   17   18   18   39   47   65   87  102  119  133  136  138  140  141  141  142  143  145  146 
LCS_GDT     F   147_A     F   147_A     18   20  150     10   17   18   18   19   19   28   30   33   36   54   62   81   85  107  117  127  133  136  137 
LCS_GDT     R   148_A     R   148_A     18   20  150     10   17   18   18   19   19   19   21   23   25   29   46   51   60   64   78   85   92  109  113 
LCS_GDT     M   149_A     M   149_A     18   20  150     10   17   18   18   19   19   19   21   23   24   25   26   27   27   28   29   30   32   34   37 
LCS_GDT     D   150_A     D   150_A     18   20  150     10   17   18   18   19   19   19   21   23   24   25   26   27   27   28   29   30   32   34   37 
LCS_GDT     G   151_A     G   151_A     18   20   24     10   17   18   18   19   19   19   21   23   24   25   26   27   27   28   29   30   32   34   37 
LCS_GDT     A   152_A     A   152_A     18   20   24     10   17   18   18   19   19   19   21   23   24   25   26   27   27   28   29   30   32   34   37 
LCS_GDT     A   153_A     A   153_A     18   20   24     10   17   18   18   19   19   19   21   23   24   25   26   27   27   28   29   30   32   34   37 
LCS_GDT     I   154_A     I   154_A     18   20   24     10   17   18   18   19   19   19   21   23   24   25   26   27   27   28   29   30   32   34   37 
LCS_GDT     N   155_A     N   155_A     18   20   24      7   17   18   18   19   19   19   21   23   24   25   26   27   27   28   29   30   32   34   37 
LCS_GDT     K   156_A     K   156_A     18   20   24     10   17   18   18   19   19   19   21   23   24   25   26   27   27   28   29   30   32   34   37 
LCS_GDT     F   157_A     F   157_A     18   20   24      3   17   18   18   19   19   19   21   23   24   25   26   27   27   28   29   30   32   34   37 
LCS_GDT     A   158_A     A   158_A     18   20   24     10   17   18   18   19   19   19   21   23   24   25   26   27   27   28   29   30   32   34   37 
LCS_GDT     D   159_A     D   159_A     18   20   24     10   17   18   18   19   19   19   21   23   24   25   26   27   27   28   29   30   32   34   37 
LCS_GDT     E   160_A     E   160_A     18   20   24     10   17   18   18   19   19   19   21   23   24   25   26   27   27   28   29   30   32   34   37 
LCS_AVERAGE  LCS_A:  60.83  (  16.26   77.41   88.83 )

GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds)
GDT DIST_CUTOFF  0.50   1.00   1.50   2.00   2.50   3.00   3.50   4.00   4.50   5.00   5.50   6.00   6.50   7.00   7.50   8.00   8.50   9.00   9.50  10.00
GDT NUMBER_AT     27     68     99    111    121    129    132    134    134    136    137    140    140    140    141    143    144    145    145    146 
GDT PERCENT_AT  16.88  42.50  61.88  69.38  75.62  80.62  82.50  83.75  83.75  85.00  85.62  87.50  87.50  87.50  88.12  89.38  90.00  90.62  90.62  91.25
GDT RMS_LOCAL    0.37   0.71   0.95   1.08   1.30   1.45   1.55   1.63   1.63   1.78   1.82   2.08   2.08   2.08   2.21   2.79   2.73   2.89   2.89   2.99
GDT RMS_ALL_AT  11.93  12.00  12.04  12.04  11.93  11.93  11.91  11.88  11.88  11.96  11.94  12.01  12.01  12.01  11.93  12.14  12.07  12.11  12.11  12.08

# Checking swapping
#   possible swapping detected:  F     4_A      F     4_A
#   possible swapping detected:  D    12_A      D    12_A
#   possible swapping detected:  E    23_A      E    23_A
#   possible swapping detected:  D    44_A      D    44_A
#   possible swapping detected:  F    56_A      F    56_A
#   possible swapping detected:  F    67_A      F    67_A
#   possible swapping detected:  Y    71_A      Y    71_A
#   possible swapping detected:  F    90_A      F    90_A
#   possible swapping detected:  E   105_A      E   105_A
#   possible swapping detected:  D   109_A      D   109_A
#   possible swapping detected:  E   116_A      E   116_A
#   possible swapping detected:  D   121_A      D   121_A
#   possible swapping detected:  D   131_A      D   131_A
#   possible swapping detected:  D   134_A      D   134_A
#   possible swapping detected:  Y   135_A      Y   135_A
#   possible swapping detected:  F   147_A      F   147_A
#   possible swapping detected:  D   159_A      D   159_A

#      Molecule1      Molecule2  DISTANCE    Mis    MC     All    Dist_max   GDC_mc  GDC_all
LGA    M     1_A      M     1_A     2.545     0    0.254   1.102    11.333   67.500   40.000
LGA    K     2_A      K     2_A     0.542     0    0.158   0.755     5.486   92.976   66.296
LGA    N     3_A      N     3_A     0.746     0    0.133   0.776     3.722   88.214   74.940
LGA    F     4_A      F     4_A     1.087     0    0.060   1.200     5.865   88.214   63.463
LGA    E     5_A      E     5_A     0.868     0    0.058   0.670     1.597   88.214   85.556
LGA    I     6_A      I     6_A     0.900     0    0.031   1.201     3.200   90.476   75.952
LGA    V     7_A      V     7_A     0.780     0    0.027   1.185     3.646   90.476   81.224
LGA    T     8_A      T     8_A     0.754     0    0.095   0.886     2.473   90.476   85.510
LGA    V     9_A      V     9_A     1.282     0    0.099   1.056     3.566   79.286   74.762
LGA    T    10_A      T    10_A     1.542     0    0.069   0.149     1.651   77.143   76.531
LGA    P    11_A      P    11_A     1.578     0    0.059   0.082     1.759   75.000   74.082
LGA    D    12_A      D    12_A     1.920     0    0.046   0.391     2.999   72.857   68.869
LGA    H    13_A      H    13_A     1.169     0    0.026   1.641     5.597   85.952   63.810
LGA    A    14_A      A    14_A     0.360     0    0.046   0.046     0.693   97.619   98.095
LGA    E    15_A      E    15_A     0.899     0    0.157   0.953     2.100   90.476   81.693
LGA    Q    16_A      Q    16_A     0.184     0    0.017   1.295     4.461  100.000   76.561
LGA    L    17_A      L    17_A     0.216     0    0.049   1.304     3.184  100.000   85.952
LGA    I    18_A      I    18_A     0.427     0    0.021   0.574     2.225  100.000   95.595
LGA    S    19_A      S    19_A     0.507     0    0.102   0.611     2.393   90.595   87.857
LGA    M    20_A      M    20_A     0.820     0    0.056   1.226     4.925   92.857   72.202
LGA    I    21_A      I    21_A     0.581     0    0.093   1.535     3.392   90.476   79.048
LGA    H    22_A      H    22_A     0.647     0    0.028   0.551     1.645   90.476   87.905
LGA    E    23_A      E    23_A     0.705     0    0.011   0.567     2.132   90.476   83.651
LGA    L    24_A      L    24_A     1.153     0    0.053   1.046     3.921   81.429   76.667
LGA    A    25_A      A    25_A     1.202     0    0.076   0.085     1.392   81.429   81.429
LGA    E    26_A      E    26_A     1.054     0    0.148   0.537     2.096   79.286   75.873
LGA    F    27_A      F    27_A     1.292     0    0.033   0.403     3.571   79.286   67.013
LGA    E    28_A      E    28_A     1.241     0    0.038   0.847     3.743   81.429   71.005
LGA    K    29_A      K    29_A     1.782     0    0.155   0.763     2.495   70.833   72.063
LGA    M    30_A      M    30_A     1.616     0    0.150   0.873     5.682   70.833   61.429
LGA    K    31_A      K    31_A     1.691     0    0.071   0.966     6.462   72.976   56.720
LGA    S    32_A      S    32_A     1.807     0    0.064   0.590     4.147   72.857   65.556
LGA    S    33_A      S    33_A     1.888     0    0.079   0.127     2.346   68.810   68.810
LGA    V    34_A      V    34_A     2.862     0    0.117   0.144     4.495   50.357   46.463
LGA    V    35_A      V    35_A     3.105     0    0.557   1.360     4.502   51.905   48.503
LGA    N    36_A      N    36_A     2.841     0    0.216   0.907     5.049   57.262   46.726
LGA    T    37_A      T    37_A     2.459     0    0.142   0.833     3.810   62.857   60.680
LGA    A    38_A      A    38_A     2.110     0    0.032   0.029     2.565   62.857   63.238
LGA    E    39_A      E    39_A     4.048     0    0.029   0.655     6.157   40.357   33.280
LGA    K    40_A      K    40_A     4.292     0    0.023   0.697     4.410   38.690   40.053
LGA    L    41_A      L    41_A     2.660     0    0.031   0.940     3.165   55.357   58.274
LGA    R    42_A      R    42_A     2.909     0    0.031   1.206     6.105   53.571   44.719
LGA    K    43_A      K    43_A     3.841     0    0.080   1.077     8.881   41.786   30.529
LGA    D    44_A      D    44_A     3.072     0    0.065   0.728     5.213   55.476   47.440
LGA    I    45_A      I    45_A     1.564     0    0.046   0.706     3.393   72.976   74.405
LGA    E    46_A      E    46_A     1.809     0    0.100   0.655     3.801   72.857   65.132
LGA    N    47_A      N    47_A     2.433     0    0.526   0.768     6.778   62.857   44.762
LGA    K    48_A      K    48_A     2.319     0    0.226   0.987     8.435   55.714   42.063
LGA    A    49_A      A    49_A     4.557     0    0.155   0.169     5.314   34.524   32.857
LGA    V    50_A      V    50_A     2.267     0    0.046   1.191     3.281   66.905   61.769
LGA    H    51_A      H    51_A     1.251     0    0.142   0.399     3.988   83.810   66.667
LGA    G    52_A      G    52_A     1.674     0    0.218   0.218     2.053   72.976   72.976
LGA    F    53_A      F    53_A     0.717     0    0.041   0.193     1.656   90.476   85.628
LGA    I    54_A      I    54_A     0.362     0    0.009   1.135     2.944  100.000   85.833
LGA    A    55_A      A    55_A     0.453     0    0.070   0.065     0.484  100.000  100.000
LGA    F    56_A      F    56_A     0.518     0    0.045   0.866     4.743   90.476   69.957
LGA    I    57_A      I    57_A     0.774     0    0.094   1.474     3.612   88.214   72.202
LGA    G    58_A      G    58_A     0.878     0    0.225   0.225     1.667   83.810   83.810
LGA    E    59_A      E    59_A     2.325     0    0.107   0.869     9.560   66.905   37.831
LGA    E    60_A      E    60_A     1.051     0    0.229   1.282     3.735   75.833   69.101
LGA    P    61_A      P    61_A     0.088     0    0.212   0.252     1.614   95.238   90.748
LGA    A    62_A      A    62_A     0.746     0    0.139   0.149     0.834   90.476   90.476
LGA    G    63_A      G    63_A     0.420     0    0.140   0.140     0.625   95.238   95.238
LGA    M    64_A      M    64_A     1.047     0    0.031   1.038     5.884   83.690   64.881
LGA    N    65_A      N    65_A     1.147     0    0.052   1.037     5.118   85.952   68.929
LGA    L    66_A      L    66_A     0.355     0    0.182   0.755     2.896   95.238   85.714
LGA    F    67_A      F    67_A     1.551     0    0.167   0.991     5.272   79.286   61.082
LGA    Y    68_A      Y    68_A     1.127     0    0.213   0.658     2.075   83.690   80.913
LGA    Y    69_A      Y    69_A     1.102     0    0.080   1.342     7.972   75.119   57.024
LGA    A    70_A      A    70_A     2.744     0    0.048   0.064     3.711   54.167   54.762
LGA    Y    71_A      Y    71_A     5.814     0    0.420   1.101    16.888   19.881    7.857
LGA    S    72_A      S    72_A     7.533     0    0.362   0.777    10.125    8.571    5.952
LGA    T    73_A      T    73_A     6.670     0    0.646   0.543     9.636   13.452    8.639
LGA    W    74_A      W    74_A     5.916     0    0.170   1.045     8.044   16.786   18.707
LGA    V    75_A      V    75_A     5.903     0    0.452   0.594     8.172   22.738   19.864
LGA    G    76_A      G    76_A     3.104     0    0.468   0.468     4.179   50.476   50.476
LGA    Q    77_A      Q    77_A     2.567     0    0.627   1.185     8.554   69.048   40.741
LGA    Y    78_A      Y    78_A     1.278     0    0.158   1.213     5.253   88.333   68.532
LGA    L    79_A      L    79_A     0.227     0    0.085   0.942     3.416   97.619   87.857
LGA    H    80_A      H    80_A     0.434     0    0.130   1.036     5.467   97.619   69.429
LGA    M    81_A      M    81_A     0.684     0    0.065   0.879     4.253   90.476   78.393
LGA    E    82_A      E    82_A     0.574     0    0.035   0.951     4.055   95.238   77.460
LGA    D    83_A      D    83_A     0.272     0    0.124   1.018     3.566   97.619   81.071
LGA    L    84_A      L    84_A     0.472     0    0.025   1.009     2.593   95.238   87.679
LGA    Y    85_A      Y    85_A     0.731     0    0.072   0.291     1.788   90.476   88.333
LGA    I    86_A      I    86_A     0.500     0    0.118   1.078     2.840   95.238   82.321
LGA    R    87_A      R    87_A     1.353     0    0.218   1.179     7.902   71.429   54.372
LGA    P    88_A      P    88_A     0.778     0    0.175   0.360     2.632   81.548   78.095
LGA    Q    89_A      Q    89_A     1.351     0    0.158   0.945     3.474   81.429   68.889
LGA    F    90_A      F    90_A     1.040     0    0.151   1.101     5.568   79.286   65.022
LGA    R    91_A      R    91_A     0.761     0    0.143   0.991     2.496   81.786   80.952
LGA    R    92_A      R    92_A     0.772     0    0.023   0.736     1.956   88.214   80.779
LGA    M    93_A      M    93_A     0.845     0    0.222   1.238     6.549   81.786   65.893
LGA    G    94_A      G    94_A     0.294     0    0.164   0.164     1.408   92.976   92.976
LGA    L    95_A      L    95_A     0.861     0    0.019   0.456     2.909   88.333   82.976
LGA    A    96_A      A    96_A     1.481     0    0.242   0.273     2.028   83.690   79.905
LGA    R    97_A      R    97_A     1.073     0    0.025   1.057     6.229   83.690   59.221
LGA    T    98_A      T    98_A     0.887     0    0.066   1.068     2.340   90.476   83.129
LGA    L    99_A      L    99_A     0.580     0    0.070   0.168     0.890   90.476   90.476
LGA    W   100_A      W   100_A     0.428     0    0.020   1.123     5.548   95.238   63.163
LGA    K   101_A      K   101_A     0.781     0    0.022   1.085     4.614   90.476   74.021
LGA    K   102_A      K   102_A     0.980     0    0.077   1.061     4.544   90.476   75.344
LGA    L   103_A      L   103_A     1.353     0    0.152   1.439     5.094   79.286   63.155
LGA    A   104_A      A   104_A     1.205     0    0.133   0.145     1.850   79.286   79.714
LGA    E   105_A      E   105_A     0.661     0    0.079   0.791     1.910   90.476   84.550
LGA    L   106_A      L   106_A     1.089     0    0.032   0.966     3.321   81.548   72.440
LGA    A   107_A      A   107_A     1.921     0    0.072   0.082     2.573   69.048   69.810
LGA    R   108_A      R   108_A     2.000     0    0.114   1.292     6.751   70.833   43.074
LGA    D   109_A      D   109_A     1.376     0    0.020   0.864     3.172   75.000   72.143
LGA    K   110_A      K   110_A     2.276     0    0.077   0.994     5.077   61.190   55.556
LGA    G   111_A      G   111_A     3.111     0    0.072   0.072     3.111   55.357   55.357
LGA    I   112_A      I   112_A     1.592     0    0.079   1.376     4.133   72.976   66.548
LGA    V   113_A      V   113_A     1.421     0    0.259   0.265     2.270   83.690   77.891
LGA    R   114_A      R   114_A     0.266     0    0.011   1.436     9.541   95.238   57.532
LGA    L   115_A      L   115_A     0.373     0    0.151   0.491     1.084   97.619   92.976
LGA    E   116_A      E   116_A     0.311     0    0.056   0.633     2.134  100.000   90.847
LGA    W   117_A      W   117_A     0.565     0    0.156   1.015     4.557   97.619   72.959
LGA    A   118_A      A   118_A     1.434     0    0.176   0.237     1.895   77.143   76.286
LGA    V   119_A      V   119_A     1.322     0    0.035   0.072     1.680   77.143   77.755
LGA    L   120_A      L   120_A     2.074     0    0.077   1.002     4.878   66.786   61.667
LGA    D   121_A      D   121_A     2.354     0    0.079   0.979     2.736   64.762   67.024
LGA    W   122_A      W   122_A     2.696     0    0.231   1.525     7.108   57.262   42.925
LGA    N   123_A      N   123_A     0.705     0    0.075   1.188     3.790   88.214   83.512
LGA    K   124_A      K   124_A     0.551     0    0.088   0.603     3.488   88.214   76.772
LGA    N   125_A      N   125_A     0.712     0    0.042   0.938     4.307   90.476   78.393
LGA    A   126_A      A   126_A     0.613     0    0.033   0.030     0.840   90.476   90.476
LGA    I   127_A      I   127_A     1.593     0    0.041   1.244     4.074   72.976   71.726
LGA    A   128_A      A   128_A     2.431     0    0.077   0.083     2.842   66.786   64.857
LGA    L   129_A      L   129_A     1.081     0    0.092   0.803     4.427   81.548   71.786
LGA    Y   130_A      Y   130_A     1.126     0    0.104   0.422     2.058   83.690   81.587
LGA    D   131_A      D   131_A     2.031     0    0.106   0.616     3.768   68.810   61.250
LGA    T   132_A      T   132_A     1.445     0    0.289   1.154     3.877   79.286   74.830
LGA    V   133_A      V   133_A     1.907     0    0.663   0.891     3.528   65.595   60.952
LGA    D   134_A      D   134_A     2.124     0    0.436   0.786     3.957   70.952   67.262
LGA    Y   135_A      Y   135_A     2.009     0    0.042   1.096     9.994   62.857   38.135
LGA    V   136_A      V   136_A     1.561     0    0.122   1.135     3.018   81.667   71.224
LGA    N   137_A      N   137_A     0.714     0    0.133   0.995     2.702   88.214   81.845
LGA    L   138_A      L   138_A     0.865     0    0.695   1.215     3.614   74.286   71.131
LGA    T   139_A      T   139_A     1.352     0    0.528   1.064     3.791   62.381   60.340
LGA    K   140_A      K   140_A     8.555     0    0.148   0.955    17.343    5.000    2.222
LGA    S   141_A      S   141_A    13.379     0    0.567   0.819    15.809    0.000    0.000
LGA    E   142_A      E   142_A    12.852     0    0.071   0.882    17.445    0.000    0.000
LGA    G   143_A      G   143_A    13.135     0    0.371   0.371    14.062    0.000    0.000
LGA    W   144_A      W   144_A    10.450     0    0.043   0.953    16.704    6.548    1.871
LGA    F   145_A      F   145_A     8.241     0    0.078   0.990    14.947    2.262    0.866
LGA    T   146_A      T   146_A     8.640     0    0.092   0.845    11.654    2.500   10.272
LGA    F   147_A      F   147_A    15.984     0    0.107   0.890    21.108    0.000    0.000
LGA    R   148_A      R   148_A    19.603     0    0.051   1.159    23.869    0.000    0.000
LGA    M   149_A      M   149_A    26.334     0    0.055   0.678    30.904    0.000    0.000
LGA    D   150_A      D   150_A    30.624     0    0.114   0.731    35.290    0.000    0.000
LGA    G   151_A      G   151_A    35.593     0    0.081   0.081    39.291    0.000    0.000
LGA    A   152_A      A   152_A    41.378     0    0.024   0.038    42.714    0.000    0.000
LGA    A   153_A      A   153_A    38.097     0    0.048   0.060    38.930    0.000    0.000
LGA    I   154_A      I   154_A    36.171     0    0.040   1.428    39.547    0.000    0.000
LGA    N   155_A      N   155_A    43.361     0    0.030   0.889    47.052    0.000    0.000
LGA    K   156_A      K   156_A    46.382     0    0.029   1.167    49.245    0.000    0.000
LGA    F   157_A      F   157_A    42.328     0    0.088   1.045    44.311    0.000    0.000
LGA    A   158_A      A   158_A    43.467     0    0.062   0.059    47.444    0.000    0.000
LGA    D   159_A      D   159_A    50.653     0    0.213   0.494    54.709    0.000    0.000
LGA    E   160_A      E   160_A    53.902     0    0.638   0.712    55.889    0.000    0.000

# RMSD_GDC results:       CA      MC common percent     ALL common percent   GDC_mc  GDC_all
NUMBER_OF_ATOMS_AA:      160     640    640  100.00    1315   1315  100.00               160
SUMMARY(RMSD_GDC):    11.229         11.404                 11.198           67.006   59.255

#CA            N1   N2   DIST      N    RMSD    GDT_TS    LGA_S3     LGA_Q 
SUMMARY(GDT)  160  160    4.0    134    1.63    71.250    76.312     7.727

LGA_LOCAL      RMSD:   1.634  Number of atoms:  134  under DIST:   4.00
LGA_ASGN_ATOMS RMSD:  11.884  Number of assigned atoms:  160 
Std_ASGN_ATOMS RMSD:  11.229  Standard rmsd on all 160 assigned CA atoms 

Unitary ROTATION matrix and the SHIFT vector superimpose molecules  (1=>2)
  X_new =  -0.922973 * X  +  -0.346909 * Y  +  -0.166661 * Z  +  -1.321438
  Y_new =   0.359547 * X  +  -0.931685 * Y  +  -0.051857 * Z  +  -2.080638
  Z_new =  -0.137286 * X  +  -0.107785 * Y  +   0.984650 * Z  +  -1.229760 

Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ:
           Phi     Theta       Psi   [DEG:       Phi     Theta       Psi ]
XYZ:  2.770124  0.137721 -0.109032   [DEG:  158.7164    7.8908   -6.2471 ]
ZXZ: -1.269139  0.175441 -2.236395   [DEG:  -72.7163   10.0520 -128.1360 ]
 
# END of job
